Bhi08G001538 (gene) Wax gourd (B227) v1

Overview
NameBhi08G001538
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionCytochrome bd ubiquinol oxidase, 14kDa subunit
Locationchr8: 54311590 .. 54312220 (+)
RNA-Seq ExpressionBhi08G001538
SyntenyBhi08G001538
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGTCCTTTTTGCAGTCCTTCATTGACCCAAAGAAGAAGATTGGGGATTCATCGCCAGATCGACCCAATGCCTCCATAATTATGGTAATTGAAACCCTAATCGTTTCTCTTTCTATGGAGTTGATTTCGAATTTTGTTCCGTGGAGATGGATTTTGGGTTGTGTCACTAGGTTAGGTCTTCGATTTAATCTGTATGATCCATATTATGATATTGATGTGAAGAAGGCTTTGAATCGACTCCTCAGGGAGGTTGTTGATACGAGCAATCAGCATTTGAAGCGGGCCATGAACCTTTCCATGAAGCATCAGTACCTTCTTGATGATCTTCAAGTTTTTTCCAACTATAGATGTTTATCTCTTCCTTAGATCTCTTCCTTAGATTGCCCTATGACTAATACCTTAGTTCGGTAGTTTTATGCTTTAACTTTAGGGAGCTTCAATTTCAACTCTCTGCTGGTTTTTTTTCCCCAGTGCTGTTGCTTGGTGTGTCAAGCTGAATGCTATTGCCTGTGCATCTGAGACATGTGCGAGAATTCCAAGGTTAACAATCGTTTATTTTTTTTTATCATCTTTTGGATTAGTCATGTGGGTTTGTGGTTTCATTTCGAAGGAAGTTACGATGAAATAA

mRNA sequence

ATGGTGTCCTTTTTGCAGTCCTTCATTGACCCAAAGAAGAAGATTGGGGATTCATCGCCAGATCGACCCAATGCCTCCATAATTATGGTAATTGAAACCCTAATCGTTTCTCTTTCTATGGAGTTGATTTCGAATTTTGTTCCGTGGAGATGGATTTTGGGTTGTGTCACTAGGTTAGGTCTTCGATTTAATCTGTATGATCCATATTATGATATTGATGTGAAGAAGGCTTTGAATCGACTCCTCAGGGAGGAAGTTACGATGAAATAA

Coding sequence (CDS)

ATGGTGTCCTTTTTGCAGTCCTTCATTGACCCAAAGAAGAAGATTGGGGATTCATCGCCAGATCGACCCAATGCCTCCATAATTATGGTAATTGAAACCCTAATCGTTTCTCTTTCTATGGAGTTGATTTCGAATTTTGTTCCGTGGAGATGGATTTTGGGTTGTGTCACTAGGTTAGGTCTTCGATTTAATCTGTATGATCCATATTATGATATTGATGTGAAGAAGGCTTTGAATCGACTCCTCAGGGAGGAAGTTACGATGAAATAA

Protein sequence

MVSFLQSFIDPKKKIGDSSPDRPNASIIMVIETLIVSLSMELISNFVPWRWILGCVTRLGLRFNLYDPYYDIDVKKALNRLLREEVTMK
Homology
[Close]
BLAST of Bhi08G001538 vs. TAIR 10
Match: AT5G25450.1 (Cytochrome bd ubiquinol oxidase, 14kDa subunit )

HSP 1 Score: 46.6 bits (109), Expect = 1.2e-05
Identity = 31/87 (35.63%), Postives = 43/87 (49.43%), Query Frame = 0 

Query: 1  MVSFLQSFIDPKKKIGDSSPDRPNASIIMVIETLIVSLSMELISNFVPWRWILGCVTRLG 60
          M SFLQ  +DP+K                     +  + M+ +SN          + R G
Sbjct: 1  MASFLQRLVDPRK-------------------NFLARMHMKSVSN---------RLRRYG 59

Query: 61 LRF-NLYDPYYDIDVKKALNRLLREEV 87
          LR+ +LYDP YD+D+K+ALNRL RE V
Sbjct: 61 LRYDDLYDPLYDLDIKEALNRLPREIV 59

[Close]
BLAST of Bhi08G001538 vs. TAIR 10
Match: AT5G25450.2 (Cytochrome bd ubiquinol oxidase, 14kDa subunit )

HSP 1 Score: 46.6 bits (109), Expect = 1.2e-05
Identity = 31/87 (35.63%), Postives = 43/87 (49.43%), Query Frame = 0 

Query: 1  MVSFLQSFIDPKKKIGDSSPDRPNASIIMVIETLIVSLSMELISNFVPWRWILGCVTRLG 60
          M SFLQ  +DP+K                     +  + M+ +SN          + R G
Sbjct: 1  MASFLQRLVDPRK-------------------NFLARMHMKSVSN---------RLRRYG 59

Query: 61 LRF-NLYDPYYDIDVKKALNRLLREEV 87
          LR+ +LYDP YD+D+K+ALNRL RE V
Sbjct: 61 LRYDDLYDPLYDLDIKEALNRLPREIV 59

[Close]
BLAST of Bhi08G001538 vs. TAIR 10
Match: AT4G32470.1 (Cytochrome bd ubiquinol oxidase, 14kDa subunit )

HSP 1 Score: 42.7 bits (99), Expect = 1.8e-04
Identity = 30/87 (34.48%), Postives = 42/87 (48.28%), Query Frame = 0 

Query: 1  MVSFLQSFIDPKKKIGDSSPDRPNASIIMVIETLIVSLSMELISNFVPWRWILGCVTRLG 60
          M S L++FIDPKK                     +  + M+ IS           + R G
Sbjct: 1  MASLLKAFIDPKK-------------------NFLARMHMKAIST---------RLRRYG 59

Query: 61 LRF-NLYDPYYDIDVKKALNRLLREEV 87
          LR+ +LYD YY +D+K+A+NRL RE V
Sbjct: 61 LRYDDLYDQYYSMDIKEAMNRLPREVV 59

[Close]
BLAST of Bhi08G001538 vs. TAIR 10
Match: AT4G32470.2 (Cytochrome bd ubiquinol oxidase, 14kDa subunit )

HSP 1 Score: 42.7 bits (99), Expect = 1.8e-04
Identity = 30/87 (34.48%), Postives = 42/87 (48.28%), Query Frame = 0 

Query: 1  MVSFLQSFIDPKKKIGDSSPDRPNASIIMVIETLIVSLSMELISNFVPWRWILGCVTRLG 60
          M S L++FIDPKK                     +  + M+ IS           + R G
Sbjct: 1  MASLLKAFIDPKK-------------------NFLARMHMKAIST---------RLRRYG 59

Query: 61 LRF-NLYDPYYDIDVKKALNRLLREEV 87
          LR+ +LYD YY +D+K+A+NRL RE V
Sbjct: 61 LRYDDLYDQYYSMDIKEAMNRLPREVV 59

[Close]
BLAST of Bhi08G001538 vs. ExPASy Swiss-Prot
Match: F4JWS8 (Cytochrome b-c1 complex subunit 7-2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=QCR7-2 PE=1 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 1.7e-04
Identity = 31/87 (35.63%), Postives = 43/87 (49.43%), Query Frame = 0 

Query: 1  MVSFLQSFIDPKKKIGDSSPDRPNASIIMVIETLIVSLSMELISNFVPWRWILGCVTRLG 60
          M SFLQ  +DP+K                     +  + M+ +SN          + R G
Sbjct: 1  MASFLQRLVDPRK-------------------NFLARMHMKSVSN---------RLRRYG 59

Query: 61 LRF-NLYDPYYDIDVKKALNRLLREEV 87
          LR+ +LYDP YD+D+K+ALNRL RE V
Sbjct: 61 LRYDDLYDPLYDLDIKEALNRLPREIV 59

[Close]
BLAST of Bhi08G001538 vs. ExPASy TrEMBL
Match: A0A2N9ISI5 (Cytochrome b-c1 complex subunit 7 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54985 PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 8.8e-04
Identity = 36/85 (42.35%), Postives = 44/85 (51.76%), Query Frame = 0 

Query: 1  MVSFLQSFIDPKKKIGDSSPDRPNASIIMVIETLIVSLSMELISNFVPWRWILGCVTRLG 60
          M SFLQSF+DPKK                       +  M+ ISN          + R G
Sbjct: 1  MASFLQSFLDPKK-------------------NWFAAQHMKSISN---------RLRRYG 57

Query: 61 LRF-NLYDPYYDIDVKKALNRLLRE 85
          LR+ +LYDPYYD+DVK+ALNRL RE
Sbjct: 61 LRYDDLYDPYYDLDVKEALNRLPRE 57

[Close]
BLAST of Bhi08G001538 vs. ExPASy TrEMBL
Match: A0A6P5XQS8 (Cytochrome b-c1 complex subunit 7 OS=Durio zibethinus OX=66656 GN=LOC111285391 PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 8.8e-04
Identity = 35/87 (40.23%), Postives = 47/87 (54.02%), Query Frame = 0 

Query: 1  MVSFLQSFIDPKKKIGDSSPDRPNASIIMVIETLIVSLSMELISNFVPWRWILGCVTRLG 60
          M SFLQSF++PKK                     + +L M+ ISN          + + G
Sbjct: 1  MASFLQSFLNPKK-------------------NWLAALHMKSISN---------RLRKYG 59

Query: 61 LRF-NLYDPYYDIDVKKALNRLLREEV 87
          LR+ +LYDPYYD+D+K+ALNRL RE V
Sbjct: 61 LRYDDLYDPYYDLDIKEALNRLPREIV 59

The following BLAST results are available for this feature:
BLAST of Bhi08G001538 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G25450.11.2e-0535.63Cytochrome bd ubiquinol oxidase, 14kDa subunit [more]
AT5G25450.21.2e-0535.63Cytochrome bd ubiquinol oxidase, 14kDa subunit [more]
AT4G32470.11.8e-0434.48Cytochrome bd ubiquinol oxidase, 14kDa subunit [more]
AT4G32470.21.8e-0434.48Cytochrome bd ubiquinol oxidase, 14kDa subunit [more]
BLAST of Bhi08G001538 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
F4JWS81.7e-0435.63Cytochrome b-c1 complex subunit 7-2, mitochondrial OS=Arabidopsis thaliana OX=37... [more]
BLAST of Bhi08G001538 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A2N9ISI58.8e-0442.35Cytochrome b-c1 complex subunit 7 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54985 ... [more]
A0A6P5XQS88.8e-0440.23Cytochrome b-c1 complex subunit 7 OS=Durio zibethinus OX=66656 GN=LOC111285391 P... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi08M001538Bhi08M001538mRNA