Bhi08G001518 (gene) Wax gourd (B227) v1

Overview


Name	Bhi08G001518
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	polyadenylate-binding protein RBP45-like
Location	chr8: 53540770 .. 53545159 (-)
RNA-Seq Expression	Bhi08G001518
Synteny	Bhi08G001518

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCTGTTTCGGATAACGTGTCTCAATTGGTAATGAAATAAAATCCCAGCAATCTCCTTCCCTTTCGTTTCTCTCTCGCTCGCGGCTTGCCTGTTTCCGACATCTAGGGTTAGGGTTTCTCCGACTTCAACGAGATCCCCAACCTCTCTTCCTTGTTTCACATTTAACAAATTCTTTCATCCCTCTCTTCTTCCAAACCATGCAGCCTGCTCCTGGTGTTGCCCCACACAACATGCCTCACCAAGCCCCTCAGTACCAGCAACAGCAACCTCCTTACATGATGATGCCGCCTCAACCGCCCCAACCCCAACCTGTCCCTCAGATGTGGCCTCAGCAGCCGCAGGCCGTTTCGCCGCAGGGCCAACCGCCTCAACCAGCCAGCGCCGATGAGGTCCGTACGCTCTGGATCGGAGACTTGCAGTACTGGATGGACGAGAACTATATTTTTAANCCAGCCAGCGCCGATGAGGTCCGTACGCTCTGGATCGGAGACTTGCAGTACTGGATGGACGAGAACTATCTTTTTAATTGCTTTGCTCATACAGGCGAGGTACGTCAAATAACGCTACCCCCAGTTCGGATCATGCGTGGATTAGTATTTATTGTATATCTGTTAGTGAAAGATTTTTGAAATGCTATTACAATGTAATCTTGGTGGATAGGAATTGGTTATATATATTTTTCTCTTTCTTTTTCTTTTTTTTAGAATTAATGATGTATGTATTCCCAGATTTCCTCCGTGAAAGTCATTCGGAACAAACAAACTGGCCAGTCCGAGGGTTACGGCTTTCTTGAGTTTTTAACACGTCCAGCTGCAGAAAGAGTACTTCAAACGTATAATGGCACCCCGATGCCTAATGGGGCACAAAATTTTAGATTGAACTGGGCATCAGCAGGGGAGAAGCGACAAGATGACTCTCCTGATTACACTATTTTTGTTGGGGATTTGGCTGGTGATGTTACTGATTATGTGCTACAAGAGACATTTAGAGCGCGTTATACATCTGTGAAGGGTGCCAAGGTTGTGATTGATAGGCTCACTGGACGTACTAAAGGTTATGGGTTTGTTAAGTTTGGAGACGAGACTGAACAAATGAGGGCGATGACTGAGATGAATGGTGTTCTCTGTTCATCCAGGCCCATGCGAATTGGACCTGCGGCTAACAAGAACACTTCTGGCAGTCAGCAATATGCGAAAAGTAAATACCACTTCCCCCCTCTCAGAGGGGAATTTCATTTTATTGAAAATCATAACATTAAATTTTCTATGGAGTATAGTTCGTCTTATTCATTCGTTTTATATATGTGGTTGAGTTTAGAGTTCTGGTATGCATTTTCAATATGCCAAGATGAAACCCGACCTCCTTTATTTTCTGTTTGGACTTTTCTCCTCTCCGCTACTTTTATTTTTAGTTTTCTAGCATTTTAATTCCAGCCTCGTTGTACCTTGGAAGAATTGTAGCCTTTCATGCCTTTTCCTTCCTGTACTTCCAATTCGAGCTTTGGTCACTGTAACTACTATAAAAAAAAACTCATAAACTTATAAAACTCCTCTTTTCTTTAAGCAGGGTGTCAAAAGGCTCTGTCAGCTTGGGGTCCGCTACTGATTTCAGCTGACACGCTTACCCTTTAATACGTTGTTCCATTTAGGTCAGTTTTTTCCCGCCAATGTCTTACCTCTTTCTTTTTATGTGGCATATTTATGCTACGGTTTTTAATTCACCTTTAGTTCTGCAACGTTTAGTTTTTCCTTTCATCTGCATGGGTATTTTTTTTCTCCCTGGCATTTCACAACGTCTAATTCCGTTAATTTTTTTTAAAAAAGTTTAGGCCACTTAGGTTCTTTAGCTAGATGGTTTTTTGAAATTTCCAACAACTGGGAATCTGGGGTCGCAGACCAGTTTGATTCTGAGCTTTCCTTCTACAACTGCAGTATGTCATATAGGTTGTGCTTGTCCTTCACCTCCTTATATTTAGGGTTTATGGGATTTACTTTCCTATGTTTTATTCTCAGTATTTGTTGGTTGGATCCCACTTCTGTAGACAAATCCACTACCTACAAAAGAATTCAATACATTTCTTGATCTGCCTGGATTTCCATTTCTTAGTTTTTCATTCTGTAGCTCGGTATTTCATTGACTCATTCCTTTCAACGTGTTGGATCTATTTACATTCATCTATACTTTATATGTACCCTACTTGTGGTTAGGATTCTATCGATTGGTTTTGCTGATTAATCGGTGTGCTGCTTTTGCCTCTTCTAGTTTTTGTCTTAAGGTCCATACTGTTTCTTGGTTTGAATCATTTTACGTAATTGATTGGCATAATTTAGTGTGCACTGCAAGCTTTCCAATATGGCATAATATGGTTGTCTCAAGTTGAAAGTTACGGAGGCTTTTGTGATATTTAGTTATTAGTTCATTAGATCGATGCTTTATAACATCCCTTTCTTTGTGAGTTCCTCTTGTTTATTATTATGTGGATTTTTCCTCCTCTGATGTGGGCAGCATAAGGAATCACTTAGTTATTTTGCATTCATTATGTTTGGCTTTGTGTCTTCTATTGTTTAGTATTCTGGTCTTCATGTTAATGTTTTCATATTGATATGAGCTGAAAGCCTAGAAGTTCATCAAATCATATGCCTATCTGAAATAATAGGAGGCTTACGTCTTATGGATAGGGGTGTGTGCCTCTGAGGCGTAAAATGTGAGCCTCAATGAAATATAGGTGGGCTTCTGTTTGATGGGATCTTTTAAGGAAAAAAATAATTACTTTGCAGGTTTAATAAATCTACACTTCAAGACAATTTTAAACTCTTCATTAGAATAAGAAAAACGGCAGGTGACGTGAGAGTTTAGTTTTTTTTTTTTAAACCTTTTTTTTCCTAAATATATATAATTGTTGCCTTTGTTCATTATTAGTTATTACAGCCAGGATAAGACTGATTTCCATCTTTCTTAGTGTTTTTAATCCTACTTCTAATTAAAAAAAATGGATGTGTTTTTTCATGTATCTTTCGTCTGCTAGTAATTTGGATTTATCTTGTTTTTGTTCGCATGCGTCTTGGTTTAACTGTTTATTTCTATTATTCACCATAGTGATGAAGTGATATGATAATGACACCATTAAGTTGAAGTGTCATTGAGAACAGCATCTTATTTAGGAAAAATGATAACGCTGGATTTTTTAGTTCATGTTGATAGAATATGTCATTTTAGTTTAATATTTTCGAATGCAGCTTCATACCAGAGTACTCCAGGGACTCAGAATGAGAACGATCCAAATAATACAACTGTGGGTACTTCAGCAATTTTCAATAGCATTATAATCTTATGGGCGTAGTTATGAGTTGTTTTTTTTAATCTTGTTTCAGATATTTGTGGGAAATTTGGATTCTAATGTCACTGATGAGCACTTGAGGCAAGTATTCAGTCAGTATGGAGAGCTGGTGCATGTTAAGATACCTGCAGGCAAGCGATGTGGCTTTGTTCAATTTTCAGACAGGTTGGTATTTTCAGAACCTTTCATGCCACCTCCCCCCATTCCGAACATTTGGTGTTCGTTTGCTCATGAGTAGTGTATTTTGTTTCTTTATTACTATTTCAGAAGCTGCGCCGAGGAAGCTTTGCGCATTTTGAATGGAACCCAAATTGGTGGGCAAAACATTAGACTTTCATGGGGCCGTAGTCCTTCTAACAAACAGGTAGTAGTATTGTGCTTCACTTATATTCTCGTATTCATTAAAGCAAATAATATAGCTTTATAAACCTCTGTTGTAAATTTACAGCCCCAGGCTGATCCTAATCAGTGGAATGGAGGAGGTGGTGGAGGAGGATATTATGGATATGGACAAGGATATGAAAATTATAGCTATGCTCCAGCTGCCCAAGATCCTAACATGTTCTACGGTGGCTATGGTGGATATGGGAACTACCAGCAACCAGCACCACAGCAGCCGTCGCAGCAACAAGGAGGATATATGTAGATGACAAGTTCTATTTCTTCTGTCCCCGAACTCTCCCCTCAAATGAGACCGGAACTTCTGCTTTTATCATTTGTAGAAGATTTTGGAGATATTACTCTCATCTTATTCTGAACAAATATTCTGTATGACTTCGTTGACTTGATGTCACTTGTGTGTTGTATTTGGTGTTAGAGGTTTTGCGTGTTGTGTTATTTGTTTTTTTTTTCTCTATATGATCATATCTATCATGGTAGCGAGTTGAATGATCTTAAATCCATGTTATAAGCTGTACGTGGGTGAACTACTACTTACTACTTATGTTCCTTCTGGTGCTGATCTAGCCAATTTGACTTATTCTGGCTTGAAACTTTTTGCTACACAGTTTTTGTATTATTACTGTAGGAGTTGATTGTCATTGAACCCAAAC

mRNA sequence

CGCTGTTTCGGATAACGTGTCTCAATTGGTAATGAAATAAAATCCCAGCAATCTCCTTCCCTTTCGTTTCTCTCTCGCTCGCGGCTTGCCTGTTTCCGACATCTAGGGTTAGGGTTTCTCCGACTTCAACGAGATCCCCAACCTCTCTTCCTTGTTTCACATTTAACAAATTCTTTCATCCCTCTCTTCTTCCAAACCATGCAGCCTGCTCCTGGTGTTGCCCCACACAACATGCCTCACCAAGCCCCTCAGTACCAGCAACAGCAACCTCCTTACATGATGATGCCGCCTCAACCGCCCCAACCCCAACCTGTCCCTCAGATGTGGCCTCAGCAGCCGCAGGCCGTTTCGCCGCAGGGCCAACCGCCTCAACCAGCCAGCGCCGATGAGGTCCGTACGCTCTGGATCGGAGACTTGCAGTACTGGATGGACGAGAACTATCTTTTTAATTGCTTTGCTCATACAGGCGAGATTTCCTCCGTGAAAGTCATTCGGAACAAACAAACTGGCCAGTCCGAGGGTTACGGCTTTCTTGAGTTTTTAACACGTCCAGCTGCAGAAAGAGTACTTCAAACGTATAATGGCACCCCGATGCCTAATGGGGCACAAAATTTTAGATTGAACTGGGCATCAGCAGGGGAGAAGCGACAAGATGACTCTCCTGATTACACTATTTTTGTTGGGGATTTGGCTGGTGATGTTACTGATTATGTGCTACAAGAGACATTTAGAGCGCGTTATACATCTGTGAAGGGTGCCAAGGTTGTGATTGATAGGCTCACTGGACGTACTAAAGGTTATGGGTTTGTTAAGTTTGGAGACGAGACTGAACAAATGAGGGCGATGACTGAGATGAATGGTGTTCTCTGTTCATCCAGGCCCATGCGAATTGGACCTGCGGCTAACAAGAACACTTCTGGCAGTCAGCAATATGCGAAAACTTCATACCAGAGTACTCCAGGGACTCAGAATGAGAACGATCCAAATAATACAACTATATTTGTGGGAAATTTGGATTCTAATGTCACTGATGAGCACTTGAGGCAAGTATTCAGTCAGTATGGAGAGCTGGTGCATGTTAAGATACCTGCAGGCAAGCGATGTGGCTTTGTTCAATTTTCAGACAGAAGCTGCGCCGAGGAAGCTTTGCGCATTTTGAATGGAACCCAAATTGGTGGGCAAAACATTAGACTTTCATGGGGCCGTAGTCCTTCTAACAAACAGCCCCAGGCTGATCCTAATCAGTGGAATGGAGGAGGTGGTGGAGGAGGATATTATGGATATGGACAAGGATATGAAAATTATAGCTATGCTCCAGCTGCCCAAGATCCTAACATGTTCTACGGTGGCTATGGTGGATATGGGAACTACCAGCAACCAGCACCACAGCAGCCGTCGCAGCAACAAGGAGGATATATGTAGATGACAAGTTCTATTTCTTCTGTCCCCGAACTCTCCCCTCAAATGAGACCGGAACTTCTGCTTTTATCATTTGTAGAAGATTTTGGAGATATTACTCTCATCTTATTCTGAACAAATATTCTGTATGACTTCGTTGACTTGATGTCACTTGTGTGTTGTATTTGGTGTTAGAGGTTTTGCGTGTTGTGTTATTTGTTTTTTTTTTCTCTATATGATCATATCTATCATGGTAGCGAGTTGAATGATCTTAAATCCATGTTATAAGCTGTACGTGGGTGAACTACTACTTACTACTTATGTTCCTTCTGGTGCTGATCTAGCCAATTTGACTTATTCTGGCTTGAAACTTTTTGCTACACAGTTTTTGTATTATTACTGTAGGAGTTGATTGTCATTGAACCCAAAC

Coding sequence (CDS)

ATGCAGCCTGCTCCTGGTGTTGCCCCACACAACATGCCTCACCAAGCCCCTCAGTACCAGCAACAGCAACCTCCTTACATGATGATGCCGCCTCAACCGCCCCAACCCCAACCTGTCCCTCAGATGTGGCCTCAGCAGCCGCAGGCCGTTTCGCCGCAGGGCCAACCGCCTCAACCAGCCAGCGCCGATGAGGTCCGTACGCTCTGGATCGGAGACTTGCAGTACTGGATGGACGAGAACTATCTTTTTAATTGCTTTGCTCATACAGGCGAGATTTCCTCCGTGAAAGTCATTCGGAACAAACAAACTGGCCAGTCCGAGGGTTACGGCTTTCTTGAGTTTTTAACACGTCCAGCTGCAGAAAGAGTACTTCAAACGTATAATGGCACCCCGATGCCTAATGGGGCACAAAATTTTAGATTGAACTGGGCATCAGCAGGGGAGAAGCGACAAGATGACTCTCCTGATTACACTATTTTTGTTGGGGATTTGGCTGGTGATGTTACTGATTATGTGCTACAAGAGACATTTAGAGCGCGTTATACATCTGTGAAGGGTGCCAAGGTTGTGATTGATAGGCTCACTGGACGTACTAAAGGTTATGGGTTTGTTAAGTTTGGAGACGAGACTGAACAAATGAGGGCGATGACTGAGATGAATGGTGTTCTCTGTTCATCCAGGCCCATGCGAATTGGACCTGCGGCTAACAAGAACACTTCTGGCAGTCAGCAATATGCGAAAACTTCATACCAGAGTACTCCAGGGACTCAGAATGAGAACGATCCAAATAATACAACTATATTTGTGGGAAATTTGGATTCTAATGTCACTGATGAGCACTTGAGGCAAGTATTCAGTCAGTATGGAGAGCTGGTGCATGTTAAGATACCTGCAGGCAAGCGATGTGGCTTTGTTCAATTTTCAGACAGAAGCTGCGCCGAGGAAGCTTTGCGCATTTTGAATGGAACCCAAATTGGTGGGCAAAACATTAGACTTTCATGGGGCCGTAGTCCTTCTAACAAACAGCCCCAGGCTGATCCTAATCAGTGGAATGGAGGAGGTGGTGGAGGAGGATATTATGGATATGGACAAGGATATGAAAATTATAGCTATGCTCCAGCTGCCCAAGATCCTAACATGTTCTACGGTGGCTATGGTGGATATGGGAACTACCAGCAACCAGCACCACAGCAGCCGTCGCAGCAACAAGGAGGATATATGTAG

Protein sequence

MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQPQPVPQMWPQQPQAVSPQGQPPQPASADEVRTLWIGDLQYWMDENYLFNCFAHTGEISSVKVIRNKQTGQSEGYGFLEFLTRPAAERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGSQQYAKTSYQSTPGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCGFVQFSDRSCAEEALRILNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGGGGGGGYYGYGQGYENYSYAPAAQDPNMFYGGYGGYGNYQQPAPQQPSQQQGGYM

Homology

[Close]

BLAST of Bhi08G001518 vs. TAIR 10
Match: AT1G11650.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 475.3 bits (1222), Expect = 4.8e-134
Identity = 270/417 (64.75%), Postives = 311/417 (74.58%), Query Frame = 0


Query: 2   QPAP-GVAPHNMPHQAPQYQQ-QQPPYMMMPPQPPQPQPVPQMWPQQPQAVSPQGQPPQP 61
           QP P G+ PH+ P  + Q Q   Q PY +    PP     PQMW   PQA +P     QP
Sbjct: 4   QPPPGGILPHHAPPPSAQQQYGYQQPYGIAGAAPPP----PQMW--NPQAAAPPS--VQP 63

Query: 62  ASADEVRTLWIGDLQYWMDENYLFNCFAHTGEISSVKVIRNKQTGQSEGYGFLEFLTRPA 121
            +ADE+RTLWIGDLQYWMDEN+L+ CFAHTGE+ S KVIRNKQTGQ EGYGF+EF +  A
Sbjct: 64  TTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAA 123

Query: 122 AERVLQTYNGTPMPN-GAQNFRLNWA--SAGEKRQDDSPDYTIFVGDLAGDVTDYVLQET 181
           AERVLQT+N  P+P+   Q FRLNWA  S+G+KR DDSPDYTIFVGDLA DVTDY+L ET
Sbjct: 124 AERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKR-DDSPDYTIFVGDLAADVTDYILLET 183

Query: 182 FRARYTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAAN 241
           FRA Y SVKGAKVVIDR+TGRTKGYGFV+F DE+EQ+RAMTEMNGV CS+RPMRIGPAA+
Sbjct: 184 FRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPAAS 243

Query: 242 KNTSGSQQYAKTSYQST-PGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVK 301
           K     Q   + SYQS+  G   +NDPNNTT+FVG LD++VTD+HL+ VFSQYGE+VHVK
Sbjct: 244 KKGVTGQ---RDSYQSSAAGVTTDNDPNNTTVFVGGLDASVTDDHLKNVFSQYGEIVHVK 303

Query: 302 IPAGKRCGFVQFSDRSCAEEALRILNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGGGG 361
           IPAGKRCGFVQFS++SCAEEALR+LNG Q+GG  +RLSWGRSPSNKQ   DP+Q+     
Sbjct: 304 IPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGTTVRLSWGRSPSNKQ-SGDPSQFY---- 363

Query: 362 GGGYYGYGQGYENYSYAPAAQDPNMFYGGY--GGY-GNYQ------QPAPQQPSQQQ 404
              Y GYGQG E Y Y    QDPN +YGGY  GGY G YQ      Q  PQQP QQQ
Sbjct: 364 ---YGGYGQGQEQYGYT-MPQDPNAYYGGYSGGGYSGGYQQTPQAGQQPPQQPPQQQ 399

[Close]

BLAST of Bhi08G001518 vs. TAIR 10
Match: AT4G27000.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 463.0 bits (1190), Expect = 2.5e-130
Identity = 258/419 (61.58%), Postives = 299/419 (71.36%), Query Frame = 0


Query: 2   QPAP-----GVAPHNMPHQAPQYQQQQPPYMMMPPQPPQPQPVPQMWPQQ--PQAVSPQ- 61
           QP P        P  +P     Y QQQ  +MM   Q  Q QP P  W QQ  P +  PQ 
Sbjct: 4   QPPPASNGAATGPGQIPSDQQAYLQQQQSWMMQHQQQQQGQP-PAGWNQQSAPSSGQPQQ 63

Query: 62  -----GQPPQPASADEVRTLWIGDLQYWMDENYLFNCFAHTGEISSVKVIRNKQTGQSEG 121
                G    P SA E+R+LWIGDLQ WMDENYL N F  TGE ++ KVIRNKQ G SEG
Sbjct: 64  QQYGGGGSQNPGSAGEIRSLWIGDLQPWMDENYLMNVFGLTGEATAAKVIRNKQNGYSEG 123

Query: 122 YGFLEFLTRPAAERVLQTYNGTPMPNGAQNFRLNWA--SAGEKRQDDSPDYTIFVGDLAG 181
           YGF+EF+    AER LQTYNG PMP+  Q FRLNWA   AGE+RQ + P++T+FVGDLA 
Sbjct: 124 YGFIEFVNHATAERNLQTYNGAPMPSSEQAFRLNWAQLGAGERRQAEGPEHTVFVGDLAP 183

Query: 182 DVTDYVLQETFRARYTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSS 241
           DVTD++L ETF+A Y+SVKGAKVV DR TGR+KGYGFV+F DE+EQ+RAMTEMNG  CSS
Sbjct: 184 DVTDHMLTETFKAVYSSVKGAKVVNDRTTGRSKGYGFVRFADESEQIRAMTEMNGQYCSS 243

Query: 242 RPMRIGPAANKNTSGSQQYAKTSYQSTPGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFS 301
           RPMR GPAANK     Q     SYQ+T G   E+DP NTTIFVG +D +VT++ L+ VF 
Sbjct: 244 RPMRTGPAANKKPLTMQ---PASYQNTQGNSGESDPTNTTIFVGAVDQSVTEDDLKSVFG 303

Query: 302 QYGELVHVKIPAGKRCGFVQFSDRSCAEEALRILNGTQIGGQNIRLSWGRSPSNKQPQAD 361
           Q+GELVHVKIPAGKRCGFVQ+++R+CAE+AL +LNGTQ+GGQ+IRLSWGRSPSNKQ Q D
Sbjct: 304 QFGELVHVKIPAGKRCGFVQYANRACAEQALSVLNGTQLGGQSIRLSWGRSPSNKQTQPD 363

Query: 362 PNQWNGGGGGGGYYGY-GQGYENYSYAPAAQDPNMFYGGY--GGYGNYQQPAPQQPSQQ 403
             Q+   GGGGGYYGY  QGYE Y YAP  QDPN +YGGY  GGYGNYQQP   Q  QQ
Sbjct: 364 QAQY---GGGGGYYGYPPQGYEAYGYAPPPQDPNAYYGGYAGGGYGNYQQPGGYQQQQQ 415

[Close]

BLAST of Bhi08G001518 vs. TAIR 10
Match: AT5G54900.1 (RNA-binding protein 45A )

HSP 1 Score: 426.4 bits (1095), Expect = 2.6e-119
Identity = 234/381 (61.42%), Postives = 277/381 (72.70%), Query Frame = 0


Query: 22  QQPPYMMMPPQPPQPQPVPQMWP--QQPQAVSPQGQPPQPASADEVRTLWIGDLQYWMDE 81
           QQ  +MMM  Q  Q Q      P  Q    +  Q     P SA +V++LWIGDLQ WMDE
Sbjct: 18  QQHLWMMMQQQQQQQQMQLSAAPLGQHQYGIGSQ----NPGSASDVKSLWIGDLQQWMDE 77

Query: 82  NYLFNCFAHTGEISSVKVIRNKQTGQSEGYGFLEFLTRPAAERVLQTYNGTPMPNGAQNF 141
           NY+ + FA +GE +S KVIRNK TGQSEGYGF+EF++   AERVLQTYNG PMP+  Q F
Sbjct: 78  NYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHSVAERVLQTYNGAPMPSTEQTF 137

Query: 142 RLNW--ASAGEKR-QDDSPDYTIFVGDLAGDVTDYVLQETFRARYTSVKGAKVVIDRLTG 201
           RLNW  A AGEKR Q + PD+TIFVGDLA +VTDY+L +TF+  Y SVKGAKVV+DR TG
Sbjct: 138 RLNWAQAGAGEKRFQTEGPDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLDRTTG 197

Query: 202 RTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGSQQYAKTSYQSTPGT 261
           R+KGYGFV+F DE EQMRAMTEMNG  CS+RPMRIGPAANKN    Q      YQ+T G 
Sbjct: 198 RSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAANKNALPMQ---PAMYQNTQGA 257

Query: 262 Q-NENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCGFVQFSDRSCAEE 321
              +NDPNNTTIFVG LD+NVTD+ L+ +F Q+GEL+HVKIP GKRCGFVQ+++++ AE 
Sbjct: 258 NAGDNDPNNTTIFVGGLDANVTDDELKSIFGQFGELLHVKIPPGKRCGFVQYANKASAEH 317

Query: 322 ALRILNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGGGGGGGYYGY---GQGYENYSYA 381
           AL +LNGTQ+GGQ+IRLSWGRSP+    Q+D  QWN    GGGYYGY    QG   Y+  
Sbjct: 318 ALSVLNGTQLGGQSIRLSWGRSPNK---QSDQAQWN----GGGYYGYPPQPQGGYGYAAQ 377

Query: 382 PAAQDPNMFYGGYGGYGNYQQ 394
           P  QDPN +YGGY GYGNYQQ
Sbjct: 378 PPTQDPNAYYGGYTGYGNYQQ 384

[Close]

BLAST of Bhi08G001518 vs. TAIR 10
Match: AT1G11650.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 384.0 bits (985), Expect = 1.5e-106
Identity = 210/315 (66.67%), Postives = 245/315 (77.78%), Query Frame = 0


Query: 2   QPAP-GVAPHNMPHQAPQYQQ-QQPPYMMMPPQPPQPQPVPQMWPQQPQAVSPQGQPPQP 61
           QP P G+ PH+ P  + Q Q   Q PY +    PP     PQMW   PQA +P     QP
Sbjct: 4   QPPPGGILPHHAPPPSAQQQYGYQQPYGIAGAAPPP----PQMW--NPQAAAPPS--VQP 63

Query: 62  ASADEVRTLWIGDLQYWMDENYLFNCFAHTGEISSVKVIRNKQTGQSEGYGFLEFLTRPA 121
            +ADE+RTLWIGDLQYWMDEN+L+ CFAHTGE+ S KVIRNKQTGQ EGYGF+EF +  A
Sbjct: 64  TTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAA 123

Query: 122 AERVLQTYNGTPMPN-GAQNFRLNWA--SAGEKRQDDSPDYTIFVGDLAGDVTDYVLQET 181
           AERVLQT+N  P+P+   Q FRLNWA  S+G+KR DDSPDYTIFVGDLA DVTDY+L ET
Sbjct: 124 AERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKR-DDSPDYTIFVGDLAADVTDYILLET 183

Query: 182 FRARYTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAAN 241
           FRA Y SVKGAKVVIDR+TGRTKGYGFV+F DE+EQ+RAMTEMNGV CS+RPMRIGPAA+
Sbjct: 184 FRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPAAS 243

Query: 242 KNTSGSQQYAKTSYQST-PGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVK 301
           K     Q   + SYQS+  G   +NDPNNTT+FVG LD++VTD+HL+ VFSQYGE+VHVK
Sbjct: 244 KKGVTGQ---RDSYQSSAAGVTTDNDPNNTTVFVGGLDASVTDDHLKNVFSQYGEIVHVK 303

Query: 302 IPAGKRCGFVQFSDR 311
           IPAGKRCGFVQFS++
Sbjct: 304 IPAGKRCGFVQFSEK 306

[Close]

BLAST of Bhi08G001518 vs. TAIR 10
Match: AT5G19350.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 377.1 bits (967), Expect = 1.8e-104
Identity = 210/379 (55.41%), Postives = 255/379 (67.28%), Query Frame = 0


Query: 42  MWPQQPQAVSPQGQPPQPASADEVRTLWIGDLQYWMDENYLFNCFAHTGEISSVKVIRNK 101
           M P QP    PQG    P + +EVRTLWIGDLQYW+DENYL +CF+ TGE+ SVKVIRNK
Sbjct: 4   MHPPQP----PQGSYHHPQTLEEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNK 63

Query: 102 QTGQSEGYGFLEFLTRPAAERVLQTYNGTPMPNGAQNFRLNWASAGE-KRQDDSPDYTIF 161
            TGQ EGYGF+EF++  AAER LQTYNGT MP     FRLNWAS G  ++ D  PD++IF
Sbjct: 64  ITGQPEGYGFIEFISHAAAERTLQTYNGTQMPGTELTFRLNWASFGSGQKVDAGPDHSIF 123

Query: 162 VGDLAGDVTDYVLQETFRARYTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMN 221
           VGDLA DVTDY+LQETFR  Y+SV+GAKVV D  TGR+KGYGFVKF +E+E+ RAM EMN
Sbjct: 124 VGDLAPDVTDYLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMN 183

Query: 222 GVLCSSRPMRIGPAANKNTSGSQQYAKT-------------SYQSTPGTQNENDPNNTTI 281
           G+ CS+RPMRI  A  K   G QQ   T             +Y + P    E+D   TTI
Sbjct: 184 GLYCSTRPMRISAATPKKNVGVQQQYVTKVTVPSAVAAPVQAYVAPP----ESDVTCTTI 243

Query: 282 FVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCGFVQFSDRSCAEEALRILNGTQIGG 341
            V NLD NVT+E L++ FSQ GE+++VKIPA K  G+VQF  R  AEEA++ + G  IG 
Sbjct: 244 SVANLDQNVTEEELKKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEAVQRMQGQVIGQ 303

Query: 342 QNIRLSWGRSPSNK--QPQADPNQWNGGGGGGGYYGYGQGYENYSYAPAAQDPNMFYGGY 401
           Q +R+SW ++P       QADPNQWN      GYYGYGQGY+ Y+Y  A QDP+++   Y
Sbjct: 304 QAVRISWSKNPGQDGWVTQADPNQWN------GYYGYGQGYDAYAYG-ATQDPSVY--AY 360

Query: 402 GGYGNYQQPAPQQPSQQQG 405
           GGYG      PQ P Q +G
Sbjct: 364 GGYG-----YPQYPQQGEG 360

[Close]

BLAST of Bhi08G001518 vs. ExPASy Swiss-Prot
Match: Q9LEB4 (Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP45 PE=1 SV=1)

HSP 1 Score: 501.1 bits (1289), Expect = 1.2e-140
Identity = 277/416 (66.59%), Postives = 312/416 (75.00%), Query Frame = 0


Query: 1   MQPAPGVAPHNMPHQAP------QYQQQQPP------YMMMPPQPPQPQPVPQ---MWPQ 60
           M P  GVA    P  AP      QYQQQ PP      +MM P QP QPQ  PQ    W Q
Sbjct: 1   MMPQSGVA---QPPMAPMSMDQHQYQQQAPPPTQQQQWMMPPQQPQQPQFQPQSQPAWAQ 60

Query: 61  QPQ-----AVSPQGQPPQP-ASADEVRTLWIGDLQYWMDENYLFNCFAHTGEISSVKVIR 120
           QP      A++     P P  + +EVR+LWIGDLQYWMDENYL  CF HTGE+ S KVIR
Sbjct: 61  QPSQQQYGAMATTNPNPSPTGNPNEVRSLWIGDLQYWMDENYLSTCFYHTGELVSAKVIR 120

Query: 121 NKQTGQSEGYGFLEFLTRPAAERVLQTYNGTPMPNGAQNFRLNWASAGE-KRQDDSPDYT 180
           NKQTGQSEGYGFLEF +  AAE +LQTYNGT MPN  QNFR+NWAS G  +R+DDS ++T
Sbjct: 121 NKQTGQSEGYGFLEFRSHAAAETILQTYNGTLMPNVEQNFRMNWASLGAGERRDDSAEHT 180

Query: 181 IFVGDLAGDVTDYVLQETFRARYTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTE 240
           IFVGDLA DVTDY+LQETF++ Y+SV+GAKVV DR+TGR+KGYGFVKF DE+EQ+RAMTE
Sbjct: 181 IFVGDLAADVTDYILQETFKSVYSSVRGAKVVTDRITGRSKGYGFVKFADESEQLRAMTE 240

Query: 241 MNGVLCSSRPMRIGPAANKNTSGSQQYAKTSYQSTPGTQNENDPNNTTIFVGNLDSNVTD 300
           MNGVLCS+RPMRIGPAANK   G+ Q  K +YQ+   TQ E+DPNNTTIFVG LD  V +
Sbjct: 241 MNGVLCSTRPMRIGPAANKKPVGTPQ--KATYQNPQATQGESDPNNTTIFVGGLDPTVAE 300

Query: 301 EHLRQVFSQYGELVHVKIPAGKRCGFVQFSDRSCAEEALRILNGTQIGGQNIRLSWGRSP 360
           EHLRQVFS YGELVHVKI AGKRCGFVQF  R+ AE+AL  LNGTQ+GGQ+IRLSWGRSP
Sbjct: 301 EHLRQVFSPYGELVHVKIVAGKRCGFVQFGTRASAEQALSSLNGTQLGGQSIRLSWGRSP 360

Query: 361 SNKQPQADPNQWNGGGGGGGYYGYGQGYENYSYAPAAQDPNMFYGGYGGYGNYQQP 395
           S+K  Q D  QW  GG GG YYGYGQGYE Y YAP AQDPNM+YG Y GY NYQQP
Sbjct: 361 SSK--QTDQTQW--GGSGGAYYGYGQGYEAYGYAPPAQDPNMYYGNYPGYANYQQP 407

[Close]

BLAST of Bhi08G001518 vs. ExPASy Swiss-Prot
Match: Q0J9Y2 (RNA-binding protein L OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-L PE=1 SV=1)

HSP 1 Score: 482.6 bits (1241), Expect = 4.3e-135
Identity = 272/427 (63.70%), Postives = 309/427 (72.37%), Query Frame = 0


Query: 2   QPAPGVA-----PHNMPHQAPQYQQQQPPYMMMPPQ---PPQPQPVPQMWPQ-QPQAVSP 61
           QP PG+      P     Q PQ+    PP   MPP     P PQ  P MW Q  PQA   
Sbjct: 7   QPQPGMGGPPPPPQGAAGQPPQWGAIPPP---MPPHQYGAPPPQQPPAMWGQPPPQAHYG 66

Query: 62  QGQPPQ-------------PASADEVRTLWIGDLQYWMDENYLFNCFAHTGEISSVKVIR 121
           Q  PPQ             PA+ADEV+TLWIGDLQ WMDE+Y++NCFA TGE+ SVK+IR
Sbjct: 67  QVPPPQPYYAAPPPQAMPAPAAADEVKTLWIGDLQPWMDESYIYNCFAATGEVQSVKLIR 126

Query: 122 NKQTGQSEGYGFLEFLTRPAAERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTI 181
           +KQ+GQ +GYGF+EF +R AA+R+LQTYNG  MPN    FRLNWASAGEKR DD+PDYTI
Sbjct: 127 DKQSGQLQGYGFVEFTSRAAADRILQTYNGQMMPNVEMVFRLNWASAGEKR-DDTPDYTI 186

Query: 182 FVGDLAGDVTDYVLQETFRARYTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEM 241
           FVGDLA DVTDY+LQETFR  Y SVKGAKVV D++T R+KGYGFVKFGD TEQ RAMTEM
Sbjct: 187 FVGDLAADVTDYLLQETFRVHYPSVKGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEM 246

Query: 242 NGVLCSSRPMRIGPAANKNTSGSQQYAKTSYQSTPGTQNENDPNNTTIFVGNLDSNVTDE 301
           NG+LCSSRPMRIGPAANK T+G Q+       +  G Q+ENDPNNTTIFVG LD NVT++
Sbjct: 247 NGMLCSSRPMRIGPAANKKTTGVQE----RVPNAQGAQSENDPNNTTIFVGGLDPNVTED 306

Query: 302 HLRQVFSQYGELVHVKIPAGKRCGFVQFSDRSCAEEALRILNGTQIGGQNIRLSWGRSPS 361
            L+QVF+ YGE+VHVKIP GKRCGFVQ+ +R  AE+AL +L GT IGGQN+RLSWGRS S
Sbjct: 307 VLKQVFAPYGEVVHVKIPVGKRCGFVQYVNRPSAEQALAVLQGTLIGGQNVRLSWGRSLS 366

Query: 362 NKQPQADPNQWNGGGGGGGYY-GYGQGYENYSYAPAAQDPNMF-YGGYGGYGNYQQP--A 403
           NKQPQ D NQW  G G GGYY GYGQGYE Y      QDPNM+ YG Y GY NYQQ   A
Sbjct: 367 NKQPQHDSNQWGAGAGAGGYYGGYGQGYEAYGGYAQPQDPNMYGYGAYAGYPNYQQQQVA 425

[Close]

BLAST of Bhi08G001518 vs. ExPASy Swiss-Prot
Match: Q9SAB3 (Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana OX=3702 GN=RBP45B PE=1 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 6.8e-133
Identity = 270/417 (64.75%), Postives = 311/417 (74.58%), Query Frame = 0


Query: 2   QPAP-GVAPHNMPHQAPQYQQ-QQPPYMMMPPQPPQPQPVPQMWPQQPQAVSPQGQPPQP 61
           QP P G+ PH+ P  + Q Q   Q PY +    PP     PQMW   PQA +P     QP
Sbjct: 4   QPPPGGILPHHAPPPSAQQQYGYQQPYGIAGAAPPP----PQMW--NPQAAAPPS--VQP 63

Query: 62  ASADEVRTLWIGDLQYWMDENYLFNCFAHTGEISSVKVIRNKQTGQSEGYGFLEFLTRPA 121
            +ADE+RTLWIGDLQYWMDEN+L+ CFAHTGE+ S KVIRNKQTGQ EGYGF+EF +  A
Sbjct: 64  TTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAA 123

Query: 122 AERVLQTYNGTPMPN-GAQNFRLNWA--SAGEKRQDDSPDYTIFVGDLAGDVTDYVLQET 181
           AERVLQT+N  P+P+   Q FRLNWA  S+G+KR DDSPDYTIFVGDLA DVTDY+L ET
Sbjct: 124 AERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKR-DDSPDYTIFVGDLAADVTDYILLET 183

Query: 182 FRARYTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAAN 241
           FRA Y SVKGAKVVIDR+TGRTKGYGFV+F DE+EQ+RAMTEMNGV CS+RPMRIGPAA+
Sbjct: 184 FRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPAAS 243

Query: 242 KNTSGSQQYAKTSYQST-PGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVK 301
           K     Q   + SYQS+  G   +NDPNNTT+FVG LD++VTD+HL+ VFSQYGE+VHVK
Sbjct: 244 KKGVTGQ---RDSYQSSAAGVTTDNDPNNTTVFVGGLDASVTDDHLKNVFSQYGEIVHVK 303

Query: 302 IPAGKRCGFVQFSDRSCAEEALRILNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGGGG 361
           IPAGKRCGFVQFS++SCAEEALR+LNG Q+GG  +RLSWGRSPSNKQ   DP+Q+     
Sbjct: 304 IPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGTTVRLSWGRSPSNKQ-SGDPSQFY---- 363

Query: 362 GGGYYGYGQGYENYSYAPAAQDPNMFYGGY--GGY-GNYQ------QPAPQQPSQQQ 404
              Y GYGQG E Y Y    QDPN +YGGY  GGY G YQ      Q  PQQP QQQ
Sbjct: 364 ---YGGYGQGQEQYGYT-MPQDPNAYYGGYSGGGYSGGYQQTPQAGQQPPQQPPQQQ 399

[Close]

BLAST of Bhi08G001518 vs. ExPASy Swiss-Prot
Match: Q93W34 (Polyadenylate-binding protein RBP45C OS=Arabidopsis thaliana OX=3702 GN=RBP45C PE=2 SV=1)

HSP 1 Score: 463.0 bits (1190), Expect = 3.5e-129
Identity = 258/419 (61.58%), Postives = 299/419 (71.36%), Query Frame = 0


Query: 2   QPAP-----GVAPHNMPHQAPQYQQQQPPYMMMPPQPPQPQPVPQMWPQQ--PQAVSPQ- 61
           QP P        P  +P     Y QQQ  +MM   Q  Q QP P  W QQ  P +  PQ 
Sbjct: 4   QPPPASNGAATGPGQIPSDQQAYLQQQQSWMMQHQQQQQGQP-PAGWNQQSAPSSGQPQQ 63

Query: 62  -----GQPPQPASADEVRTLWIGDLQYWMDENYLFNCFAHTGEISSVKVIRNKQTGQSEG 121
                G    P SA E+R+LWIGDLQ WMDENYL N F  TGE ++ KVIRNKQ G SEG
Sbjct: 64  QQYGGGGSQNPGSAGEIRSLWIGDLQPWMDENYLMNVFGLTGEATAAKVIRNKQNGYSEG 123

Query: 122 YGFLEFLTRPAAERVLQTYNGTPMPNGAQNFRLNWA--SAGEKRQDDSPDYTIFVGDLAG 181
           YGF+EF+    AER LQTYNG PMP+  Q FRLNWA   AGE+RQ + P++T+FVGDLA 
Sbjct: 124 YGFIEFVNHATAERNLQTYNGAPMPSSEQAFRLNWAQLGAGERRQAEGPEHTVFVGDLAP 183

Query: 182 DVTDYVLQETFRARYTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSS 241
           DVTD++L ETF+A Y+SVKGAKVV DR TGR+KGYGFV+F DE+EQ+RAMTEMNG  CSS
Sbjct: 184 DVTDHMLTETFKAVYSSVKGAKVVNDRTTGRSKGYGFVRFADESEQIRAMTEMNGQYCSS 243

Query: 242 RPMRIGPAANKNTSGSQQYAKTSYQSTPGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFS 301
           RPMR GPAANK     Q     SYQ+T G   E+DP NTTIFVG +D +VT++ L+ VF 
Sbjct: 244 RPMRTGPAANKKPLTMQ---PASYQNTQGNSGESDPTNTTIFVGAVDQSVTEDDLKSVFG 303

Query: 302 QYGELVHVKIPAGKRCGFVQFSDRSCAEEALRILNGTQIGGQNIRLSWGRSPSNKQPQAD 361
           Q+GELVHVKIPAGKRCGFVQ+++R+CAE+AL +LNGTQ+GGQ+IRLSWGRSPSNKQ Q D
Sbjct: 304 QFGELVHVKIPAGKRCGFVQYANRACAEQALSVLNGTQLGGQSIRLSWGRSPSNKQTQPD 363

Query: 362 PNQWNGGGGGGGYYGY-GQGYENYSYAPAAQDPNMFYGGY--GGYGNYQQPAPQQPSQQ 403
             Q+   GGGGGYYGY  QGYE Y YAP  QDPN +YGGY  GGYGNYQQP   Q  QQ
Sbjct: 364 QAQY---GGGGGYYGYPPQGYEAYGYAPPPQDPNAYYGGYAGGGYGNYQQPGGYQQQQQ 415

[Close]

BLAST of Bhi08G001518 vs. ExPASy Swiss-Prot
Match: Q9FPJ8 (Polyadenylate-binding protein RBP45A OS=Arabidopsis thaliana OX=3702 GN=RBP45A PE=2 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 3.6e-118
Identity = 234/381 (61.42%), Postives = 277/381 (72.70%), Query Frame = 0


Query: 22  QQPPYMMMPPQPPQPQPVPQMWP--QQPQAVSPQGQPPQPASADEVRTLWIGDLQYWMDE 81
           QQ  +MMM  Q  Q Q      P  Q    +  Q     P SA +V++LWIGDLQ WMDE
Sbjct: 18  QQHLWMMMQQQQQQQQMQLSAAPLGQHQYGIGSQ----NPGSASDVKSLWIGDLQQWMDE 77

Query: 82  NYLFNCFAHTGEISSVKVIRNKQTGQSEGYGFLEFLTRPAAERVLQTYNGTPMPNGAQNF 141
           NY+ + FA +GE +S KVIRNK TGQSEGYGF+EF++   AERVLQTYNG PMP+  Q F
Sbjct: 78  NYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHSVAERVLQTYNGAPMPSTEQTF 137

Query: 142 RLNW--ASAGEKR-QDDSPDYTIFVGDLAGDVTDYVLQETFRARYTSVKGAKVVIDRLTG 201
           RLNW  A AGEKR Q + PD+TIFVGDLA +VTDY+L +TF+  Y SVKGAKVV+DR TG
Sbjct: 138 RLNWAQAGAGEKRFQTEGPDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLDRTTG 197

Query: 202 RTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGSQQYAKTSYQSTPGT 261
           R+KGYGFV+F DE EQMRAMTEMNG  CS+RPMRIGPAANKN    Q      YQ+T G 
Sbjct: 198 RSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAANKNALPMQ---PAMYQNTQGA 257

Query: 262 Q-NENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCGFVQFSDRSCAEE 321
              +NDPNNTTIFVG LD+NVTD+ L+ +F Q+GEL+HVKIP GKRCGFVQ+++++ AE 
Sbjct: 258 NAGDNDPNNTTIFVGGLDANVTDDELKSIFGQFGELLHVKIPPGKRCGFVQYANKASAEH 317

Query: 322 ALRILNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGGGGGGGYYGY---GQGYENYSYA 381
           AL +LNGTQ+GGQ+IRLSWGRSP+    Q+D  QWN    GGGYYGY    QG   Y+  
Sbjct: 318 ALSVLNGTQLGGQSIRLSWGRSPNK---QSDQAQWN----GGGYYGYPPQPQGGYGYAAQ 377

Query: 382 PAAQDPNMFYGGYGGYGNYQQ 394
           P  QDPN +YGGY GYGNYQQ
Sbjct: 378 PPTQDPNAYYGGYTGYGNYQQ 384

[Close]

BLAST of Bhi08G001518 vs. ExPASy TrEMBL
Match: A0A5A7UNS2 (Polyadenylate-binding protein RBP45-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005850 PE=4 SV=1)

HSP 1 Score: 789.3 bits (2037), Expect = 7.9e-225
Identity = 387/407 (95.09%), Postives = 397/407 (97.54%), Query Frame = 0


Query: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQPQPVPQMWPQQPQAVSPQGQPPQPA 60
           MQPAPGVAPHNMPHQAPQYQQQQPPYMMM PQPPQ QPVPQMWPQQPQA SPQGQPPQPA
Sbjct: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQGQPPQPA 60

Query: 61  SADEVRTLWIGDLQYWMDENYLFNCFAHTGEISSVKVIRNKQTGQSEGYGFLEFLTRPAA 120
           + DEVRTLWIGDLQYWMDENY+FNCFAHTGE+SSVKVIRNKQTGQSEGYGF+EFLTRPAA
Sbjct: 61  NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120

Query: 121 ERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180
           ERVLQTYNGT MPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR
Sbjct: 121 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180

Query: 181 YTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTS 240
           Y SVKGAKVVIDRLTGRTKGYGFVKFGDE+EQ+RAMTEMNGV CSSRPMRIGPAANKNTS
Sbjct: 181 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQIRAMTEMNGVHCSSRPMRIGPAANKNTS 240

Query: 241 GSQQYAKTSYQSTPGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGK 300
           GSQQ++KTSYQ+ PGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGK
Sbjct: 241 GSQQFSKTSYQNPPGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGK 300

Query: 301 RCGFVQFSDRSCAEEALRILNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGGGGGGGYY 360
           RCGFVQFSDRSCAEEALR+LNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGGGGGGGYY
Sbjct: 301 RCGFVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGGGGGGGYY 360

Query: 361 GYGQGYENYSYAPAAQDPNMFYGGYGGYGNYQQPAPQQPSQQQGGYM 408
           GYGQGYENYSYAPAAQDPNMFY GYGGYGNYQQPA QQPSQQQGGYM
Sbjct: 361 GYGQGYENYSYAPAAQDPNMFYSGYGGYGNYQQPAAQQPSQQQGGYM 407

[Close]

BLAST of Bhi08G001518 vs. ExPASy TrEMBL
Match: A0A1S3B3F4 (polyadenylate-binding protein RBP45-like OS=Cucumis melo OX=3656 GN=LOC103485380 PE=4 SV=1)

HSP 1 Score: 789.3 bits (2037), Expect = 7.9e-225
Identity = 387/407 (95.09%), Postives = 397/407 (97.54%), Query Frame = 0


Query: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQPQPVPQMWPQQPQAVSPQGQPPQPA 60
           MQPAPGVAPHNMPHQAPQYQQQQPPYMMM PQPPQ QPVPQMWPQQPQA SPQGQPPQPA
Sbjct: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQGQPPQPA 60

Query: 61  SADEVRTLWIGDLQYWMDENYLFNCFAHTGEISSVKVIRNKQTGQSEGYGFLEFLTRPAA 120
           + DEVRTLWIGDLQYWMDENY+FNCFAHTGE+SSVKVIRNKQTGQSEGYGF+EFLTRPAA
Sbjct: 61  NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120

Query: 121 ERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180
           ERVLQTYNGT MPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR
Sbjct: 121 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180

Query: 181 YTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTS 240
           Y SVKGAKVVIDRLTGRTKGYGFVKFGDE+EQ+RAMTEMNGV CSSRPMRIGPAANKNTS
Sbjct: 181 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQIRAMTEMNGVHCSSRPMRIGPAANKNTS 240

Query: 241 GSQQYAKTSYQSTPGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGK 300
           GSQQ++KTSYQ+ PGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGK
Sbjct: 241 GSQQFSKTSYQNPPGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGK 300

Query: 301 RCGFVQFSDRSCAEEALRILNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGGGGGGGYY 360
           RCGFVQFSDRSCAEEALR+LNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGGGGGGGYY
Sbjct: 301 RCGFVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGGGGGGGYY 360

Query: 361 GYGQGYENYSYAPAAQDPNMFYGGYGGYGNYQQPAPQQPSQQQGGYM 408
           GYGQGYENYSYAPAAQDPNMFY GYGGYGNYQQPA QQPSQQQGGYM
Sbjct: 361 GYGQGYENYSYAPAAQDPNMFYSGYGGYGNYQQPAAQQPSQQQGGYM 407

[Close]

BLAST of Bhi08G001518 vs. ExPASy TrEMBL
Match: A0A6J1F4A1 (polyadenylate-binding protein RBP45-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111440051 PE=4 SV=1)

HSP 1 Score: 782.7 bits (2020), Expect = 7.4e-223
Identity = 387/408 (94.85%), Postives = 394/408 (96.57%), Query Frame = 0


Query: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQPQPVPQMWPQQPQAVSPQGQPPQPA 60
           MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQ QPVPQMWPQQPQA SPQGQPPQPA
Sbjct: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQTQPVPQMWPQQPQAASPQGQPPQPA 60

Query: 61  SADEVRTLWIGDLQYWMDENYLFNCFAHTGEISSVKVIRNKQTGQSEGYGFLEFLTRPAA 120
           S DEVRTLWIGDLQYWMDEN LFNCFAHTGEISSVKVIRNKQTGQSEGYGF+EFLTRPAA
Sbjct: 61  SGDEVRTLWIGDLQYWMDENALFNCFAHTGEISSVKVIRNKQTGQSEGYGFIEFLTRPAA 120

Query: 121 ERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180
           ERVLQTYNGTPMP GAQNFRLNWASAGEKRQDDSP+YTIFVGDLAGDVTDYVLQETFR R
Sbjct: 121 ERVLQTYNGTPMPIGAQNFRLNWASAGEKRQDDSPEYTIFVGDLAGDVTDYVLQETFRGR 180

Query: 181 YTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTS 240
           YTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGV+CSSRPMRIGPAANKNTS
Sbjct: 181 YTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVICSSRPMRIGPAANKNTS 240

Query: 241 GSQQYAKTSYQSTPGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGK 300
           G+QQYAKTSYQ+  GTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGK
Sbjct: 241 GTQQYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGK 300

Query: 301 RCGFVQFSDRSCAEEALRILNGTQIGGQNIRLSWGRSPSNKQPQADPNQWN---GGGGGG 360
           RCGFVQFSDRSCA+EALR+LNGTQIGGQ IRLSWGRSPSNKQPQADPNQWN   GGGGGG
Sbjct: 301 RCGFVQFSDRSCADEALRVLNGTQIGGQTIRLSWGRSPSNKQPQADPNQWNGGGGGGGGG 360

Query: 361 GYYGYGQGYENYSYAPAAQDPNMFYGGYGGYGNYQQPAPQQPSQQQGG 406
           GYYGYGQGYENYSYAPAAQDPNMFY GYGGYGNYQQP PQQPSQQQGG
Sbjct: 361 GYYGYGQGYENYSYAPAAQDPNMFYSGYGGYGNYQQPGPQQPSQQQGG 408

[Close]

BLAST of Bhi08G001518 vs. ExPASy TrEMBL
Match: A0A6J1JV65 (polyadenylate-binding protein RBP45-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111490024 PE=4 SV=1)

HSP 1 Score: 781.2 bits (2016), Expect = 2.1e-222
Identity = 390/408 (95.59%), Postives = 396/408 (97.06%), Query Frame = 0


Query: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQPQPVPQMWPQQPQAVSPQGQPPQPA 60
           MQPAPGVA HNMPHQAPQYQQQQPPYMMM   PPQ QPVPQMWPQQPQAVSPQGQPPQPA
Sbjct: 1   MQPAPGVALHNMPHQAPQYQQQQPPYMMM---PPQAQPVPQMWPQQPQAVSPQGQPPQPA 60

Query: 61  SADEVRTLWIGDLQYWMDENYLFNCFAHTGEISSVKVIRNKQTGQSEGYGFLEFLTRPAA 120
           +ADEVRTLWIGDLQYWMDENYLFNCFAHTGE+SSVKVIRNKQTGQSEGYGF+EFLTRPAA
Sbjct: 61  NADEVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120

Query: 121 ERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180
           ERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR
Sbjct: 121 ERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180

Query: 181 YTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTS 240
           YTS+KGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTS
Sbjct: 181 YTSLKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTS 240

Query: 241 GSQQYAKTSYQSTPGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGK 300
           G QQYAKTSYQ+  GTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGK
Sbjct: 241 GGQQYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGK 300

Query: 301 RCGFVQFSDRSCAEEALRILNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGGGGGGGYY 360
           RCGFVQFSDRSCAEEALR+LNGTQIGGQNIRLSWGRSPSNKQPQADPNQWN   GGGGYY
Sbjct: 301 RCGFVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSNKQPQADPNQWN---GGGGYY 360

Query: 361 GYGQGYENYSYAPAAQDPNMFYGGY-GGYGNYQQPAPQQPSQQQGGYM 408
           GYGQGYENYSYAPAAQDPNMFYGGY GGYGNYQQPAPQQPSQQQGGYM
Sbjct: 361 GYGQGYENYSYAPAAQDPNMFYGGYGGGYGNYQQPAPQQPSQQQGGYM 402

[Close]

BLAST of Bhi08G001518 vs. ExPASy TrEMBL
Match: A0A6J1GRK0 (polyadenylate-binding protein RBP45-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456823 PE=4 SV=1)

HSP 1 Score: 778.9 bits (2010), Expect = 1.1e-221
Identity = 389/408 (95.34%), Postives = 395/408 (96.81%), Query Frame = 0


Query: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQPQPVPQMWPQQPQAVSPQGQPPQPA 60
           MQPAPGVA HNMPHQAPQYQQQQPPYMMM   PPQ QPVPQMWPQQPQAVSPQGQPPQPA
Sbjct: 1   MQPAPGVALHNMPHQAPQYQQQQPPYMMM---PPQAQPVPQMWPQQPQAVSPQGQPPQPA 60

Query: 61  SADEVRTLWIGDLQYWMDENYLFNCFAHTGEISSVKVIRNKQTGQSEGYGFLEFLTRPAA 120
           +ADEVRTLWIGDLQYWMDENYLFNCFAHTGE+SSVKVIRNKQTGQSEGYGF+EFLTRPAA
Sbjct: 61  NADEVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120

Query: 121 ERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180
           ERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR
Sbjct: 121 ERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180

Query: 181 YTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTS 240
           YTS+KGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTS
Sbjct: 181 YTSLKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTS 240

Query: 241 GSQQYAKTSYQSTPGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGK 300
           G QQYAKTSYQ+  GTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGK
Sbjct: 241 GGQQYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGK 300

Query: 301 RCGFVQFSDRSCAEEALRILNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGGGGGGGYY 360
           RCGFVQFSDRSCAEEALR+LNGTQIGGQNIRLSWGRSPSNKQPQADPNQWN   GGGGYY
Sbjct: 301 RCGFVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSNKQPQADPNQWN---GGGGYY 360

Query: 361 GYGQGYENYSYAPAAQDPNMFYGGY-GGYGNYQQPAPQQPSQQQGGYM 408
           GYGQGYENYSYAPAAQDPNMFY GY GGYGNYQQPAPQQPSQQQGGYM
Sbjct: 361 GYGQGYENYSYAPAAQDPNMFYSGYGGGYGNYQQPAPQQPSQQQGGYM 402

The following BLAST results are available for this feature:

BLAST of Bhi08G001518 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G11650.2	4.8e-134	64.75	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G27000.1	2.5e-130	61.58	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G54900.1	2.6e-119	61.42	RNA-binding protein 45A	[more]
AT1G11650.1	1.5e-106	66.67	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G19350.2	1.8e-104	55.41	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

BLAST of Bhi08G001518 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LEB4	1.2e-140	66.59	Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP4...	[more]
Q0J9Y2	4.3e-135	63.70	RNA-binding protein L OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-L PE=1 SV=...	[more]
Q9SAB3	6.8e-133	64.75	Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana OX=3702 GN=RBP45B P...	[more]
Q93W34	3.5e-129	61.58	Polyadenylate-binding protein RBP45C OS=Arabidopsis thaliana OX=3702 GN=RBP45C P...	[more]
Q9FPJ8	3.6e-118	61.42	Polyadenylate-binding protein RBP45A OS=Arabidopsis thaliana OX=3702 GN=RBP45A P...	[more]

BLAST of Bhi08G001518 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UNS2	7.9e-225	95.09	Polyadenylate-binding protein RBP45-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3B3F4	7.9e-225	95.09	polyadenylate-binding protein RBP45-like OS=Cucumis melo OX=3656 GN=LOC103485380...	[more]
A0A6J1F4A1	7.4e-223	94.85	polyadenylate-binding protein RBP45-like isoform X1 OS=Cucurbita moschata OX=366...	[more]
A0A6J1JV65	2.1e-222	95.59	polyadenylate-binding protein RBP45-like isoform X2 OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1GRK0	1.1e-221	95.34	polyadenylate-binding protein RBP45-like isoform X2 OS=Cucurbita moschata OX=366...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 266..333 e-value: 9.9E-24 score: 94.8 coord: 67..142 e-value: 1.9E-13 score: 60.7 coord: 158..232 e-value: 1.9E-17 score: 74.0
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 267..331 e-value: 1.7E-17 score: 63.0 coord: 159..227 e-value: 1.5E-11 score: 43.9 coord: 68..132 e-value: 4.7E-12 score: 45.6
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 66..146 score: 15.54503
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 265..337 score: 18.205673
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 157..236 score: 16.022581
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 8..150 e-value: 3.9E-23 score: 83.9 coord: 151..243 e-value: 1.4E-19 score: 72.4
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 244..373 e-value: 1.4E-29 score: 104.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 333..349
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 387..407
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 232..265
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 333..353
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 391..407
None	No IPR available	PANTHER	PTHR47640	TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED	coord: 17..399
None	No IPR available	PANTHER	PTHR47640:SF48	POLYADENYLATE-BINDING PROTEIN RBP45B	coord: 17..399
None	No IPR available	CDD	cd12346	RRM3_NGR1_NAM8_like	coord: 264..335 e-value: 3.15888E-38 score: 130.501
None	No IPR available	CDD	cd12344	RRM1_SECp43_like	coord: 67..145 e-value: 1.84296E-46 score: 152.417
None	No IPR available	CDD	cd12345	RRM2_SECp43_like	coord: 156..235 e-value: 3.32176E-48 score: 157.055
None	No IPR available	SUPERFAMILY	81995	beta-sandwich domain of Sec23/24	coord: 2..62
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 252..365
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 65..239

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi08M001518	Bhi08M001518	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding