Bhi08G001513 (gene) Wax gourd (B227) v1

Overview
NameBhi08G001513
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionDUF4228 domain-containing protein
Locationchr8: 53514452 .. 53514805 (+)
RNA-Seq ExpressionBhi08G001513
SyntenyBhi08G001513
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCAACTGTTGCCGGAGCCAATCTTCTACAATGGTCTTCGTAGGAGACGATTGGGGGTCCTTCAGTTCTAAGCACGGCCGTGGCCGCGGCGGAAACGCCACAACCTCCGGCGGCGATCCAGAGAAGTATAGACTACTTGGAGAGAAAGAAGCAGCGTCGTGTTCGCAGCCGCAAGTGAAAATCAAGATGTCGAAGAGAGAGCTTGAGGATCTGGTGAAGAAGCTGGAGATGCAAGGCATGAGTCTAGAACAAGTTATTGGCCGGATGGTGATGAACGGTGAAGATGAGTTTGAAGTTGAGCATCATCGATCATGGAGGCCTTCCCTTCAAAGCATTCCAGAGGATTACTGA

mRNA sequence

ATGGGCAACTGTTGCCGGAGCCAATCTTCTACAATGGTCTTCGTAGGAGACGATTGGGGGTCCTTCAGTTCTAAGCACGGCCGTGGCCGCGGCGGAAACGCCACAACCTCCGGCGGCGATCCAGAGAAGTATAGACTACTTGGAGAGAAAGAAGCAGCGTCGTGTTCGCAGCCGCAAGTGAAAATCAAGATGTCGAAGAGAGAGCTTGAGGATCTGGTGAAGAAGCTGGAGATGCAAGGCATGAGTCTAGAACAAGTTATTGGCCGGATGGTGATGAACGGTGAAGATGAGTTTGAAGTTGAGCATCATCGATCATGGAGGCCTTCCCTTCAAAGCATTCCAGAGGATTACTGA

Coding sequence (CDS)

ATGGGCAACTGTTGCCGGAGCCAATCTTCTACAATGGTCTTCGTAGGAGACGATTGGGGGTCCTTCAGTTCTAAGCACGGCCGTGGCCGCGGCGGAAACGCCACAACCTCCGGCGGCGATCCAGAGAAGTATAGACTACTTGGAGAGAAAGAAGCAGCGTCGTGTTCGCAGCCGCAAGTGAAAATCAAGATGTCGAAGAGAGAGCTTGAGGATCTGGTGAAGAAGCTGGAGATGCAAGGCATGAGTCTAGAACAAGTTATTGGCCGGATGGTGATGAACGGTGAAGATGAGTTTGAAGTTGAGCATCATCGATCATGGAGGCCTTCCCTTCAAAGCATTCCAGAGGATTACTGA

Protein sequence

MGNCCRSQSSTMVFVGDDWGSFSSKHGRGRGGNATTSGGDPEKYRLLGEKEAASCSQPQVKIKMSKRELEDLVKKLEMQGMSLEQVIGRMVMNGEDEFEVEHHRSWRPSLQSIPEDY
Homology
BLAST of Bhi08G001513 vs. TAIR 10
Match: AT4G21920.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20340.1); Has 40 Blast hits to 40 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 70.9 bits (172), Expect = 7.9e-13
Identity = 42/129 (32.56%), Postives = 74/129 (57.36%), Query Frame = 0

Query: 1   MGNC-CRSQSSTMVFVGDDWGSFSSKHGRGRGGNATTSGGDPEKYRLLGE-------KEA 60
           MGNC C ++ +T  + GDD GS++ +  R R         D EK  LLGE         +
Sbjct: 1   MGNCICVTEKTTTSWSGDDNGSYNKRRRRRRSTVVHDDNDDGEK--LLGETSNVTSTSSS 60

Query: 61  ASCSQPQVKIKMSKRELEDLVKKLEMQGMSLEQVIGRMVMNGEDEF------EVEHHRSW 116
           +S  + ++KI+++K+ELEDL++ + ++ ++ E+++ +++  G D+          HH+ W
Sbjct: 61  SSSERREIKIRITKKELEDLMRNIGLKSLTAEEILSKLIFEGGDQIGFSAVDVTNHHQPW 120

BLAST of Bhi08G001513 vs. TAIR 10
Match: AT3G20340.1 (Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. )

HSP 1 Score: 54.3 bits (129), Expect = 7.6e-08
Identity = 36/117 (30.77%), Postives = 60/117 (51.28%), Query Frame = 0

Query: 1   MGNCCRSQSSTMVFVGDDWGSFSSKHGRGRG-GNATTSGGDPEKYRLLGEKEAASCSQPQ 60
           MGNC R +S  M + G+DW  F ++        + TT  G P    ++     +S    +
Sbjct: 1   MGNCLRHESE-MHWAGEDWDEFITEDEEDHHYSSKTTRDGKPV---IVTRDSKSSVPSHE 60

Query: 61  VKIKMSKRELEDLVKKLEMQGMSL-EQVIGRMVMNGEDEFEVEHHRSWRPSLQSIPE 116
           +KI+++K++L DL+ K+ +  ++  +Q     ++N     E    R WRP LQSIPE
Sbjct: 61  IKIRLTKKQLHDLLSKVNVHDLTFQQQTFSCPILNNRGYEEANQQRLWRPVLQSIPE 113

BLAST of Bhi08G001513 vs. ExPASy TrEMBL
Match: A0A5A7UTK3 (DUF4228 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005800 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 6.9e-49
Identity = 103/118 (87.29%), Postives = 111/118 (94.07%), Query Frame = 0

Query: 1   MGNCCRSQSSTMVFVGDDWGSFSSKHGRGRGGNATTSGGDPEKYRLLG-EKEAASCSQPQ 60
           MGNCCRSQSSTMVF GDDWGSFSSKHGRG GGNATTSGGDPEK+RLLG +KEAASCSQP 
Sbjct: 1   MGNCCRSQSSTMVFAGDDWGSFSSKHGRGCGGNATTSGGDPEKHRLLGDQKEAASCSQPL 60

Query: 61  VKIKMSKRELEDLVKKLEMQGMSLEQVIGRMVMNGEDEFEVEHHRSWRPSLQSIPEDY 118
           VKIKM+KRELE LVKKLEMQG++LEQVIGRM M GE+E+E+EHHRSWRPSLQSIPEDY
Sbjct: 61  VKIKMTKRELEVLVKKLEMQGLTLEQVIGRM-MKGEEEYEIEHHRSWRPSLQSIPEDY 117

BLAST of Bhi08G001513 vs. ExPASy TrEMBL
Match: A0A6J1EYG4 (uncharacterized protein LOC111440057 OS=Cucurbita moschata OX=3662 GN=LOC111440057 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 3.4e-48
Identity = 98/115 (85.22%), Postives = 107/115 (93.04%), Query Frame = 0

Query: 1   MGNCCRSQSSTMVFVGDDWGSFSSKHGRGRGGNATTSGGDPEKYRLLGEKEAASCSQPQV 60
           MGNCCRSQSSTM+F GDDWGSFSSKHGRGRGGNA+TS GDPEKYRLLGEK+ +SC QPQV
Sbjct: 1   MGNCCRSQSSTMIFAGDDWGSFSSKHGRGRGGNASTSSGDPEKYRLLGEKQTSSCPQPQV 60

Query: 61  KIKMSKRELEDLVKKLEMQGMSLEQVIGRMVMNGEDEFEVEHHRSWRPSLQSIPE 116
           KIKM+KRELEDLVK LE++G+SLEQVIGRM MN EDEF+ EHHRSWRPSLQSIPE
Sbjct: 61  KIKMTKRELEDLVKNLEIEGLSLEQVIGRM-MNDEDEFQGEHHRSWRPSLQSIPE 114

BLAST of Bhi08G001513 vs. ExPASy TrEMBL
Match: A0A0A0LRL1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G063490 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 7.6e-48
Identity = 103/119 (86.55%), Postives = 108/119 (90.76%), Query Frame = 0

Query: 1   MGNCCRSQSSTMVFVGDDWGSFSSKHGRGRGGN--ATTSGGDPEKYRLLGEKEAASCSQP 60
           MGNCCRSQSSTMVF GDDWGSFSSKHGRG G N  A TSGGDPEK+RLLGEKEA SCSQP
Sbjct: 1   MGNCCRSQSSTMVFAGDDWGSFSSKHGRGCGRNVSAATSGGDPEKHRLLGEKEAGSCSQP 60

Query: 61  QVKIKMSKRELEDLVKKLEMQGMSLEQVIGRMVMNGEDEFEVEHHRSWRPSLQSIPEDY 118
            VKIKM+KRELE LVKKLEMQG+SLEQVIGRM M GE+EFE+EHHRSWRPSLQSIPEDY
Sbjct: 61  LVKIKMTKRELEVLVKKLEMQGLSLEQVIGRM-MKGEEEFEIEHHRSWRPSLQSIPEDY 118

BLAST of Bhi08G001513 vs. ExPASy TrEMBL
Match: A0A6J1KIA5 (uncharacterized protein LOC111495485 OS=Cucurbita maxima OX=3661 GN=LOC111495485 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.7e-47
Identity = 98/115 (85.22%), Postives = 106/115 (92.17%), Query Frame = 0

Query: 1   MGNCCRSQSSTMVFVGDDWGSFSSKHGRGRGGNATTSGGDPEKYRLLGEKEAASCSQPQV 60
           MGNCCRSQSSTMVF GDDWGSFSSKHGRGRGGNA+ S GDPEKYRLLGEK+ +SC QPQV
Sbjct: 1   MGNCCRSQSSTMVFAGDDWGSFSSKHGRGRGGNASASRGDPEKYRLLGEKQTSSCPQPQV 60

Query: 61  KIKMSKRELEDLVKKLEMQGMSLEQVIGRMVMNGEDEFEVEHHRSWRPSLQSIPE 116
           KIKM+KRELEDLVK LE++G+SLEQVIGRM MN EDEF+ EHHRSWRPSLQSIPE
Sbjct: 61  KIKMTKRELEDLVKNLEIEGLSLEQVIGRM-MNDEDEFQGEHHRSWRPSLQSIPE 114

BLAST of Bhi08G001513 vs. ExPASy TrEMBL
Match: A0A1S3BEX3 (uncharacterized protein LOC103489132 OS=Cucumis melo OX=3656 GN=LOC103489132 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 8.2e-42
Identity = 92/107 (85.98%), Postives = 100/107 (93.46%), Query Frame = 0

Query: 12  MVFVGDDWGSFSSKHGRGRGGNATTSGGDPEKYRLLG-EKEAASCSQPQVKIKMSKRELE 71
           MVF GDDWGSFSSKHGRG GGNATTSGGDPEK+RLLG +KEAASCSQP VKIKM+KRELE
Sbjct: 1   MVFAGDDWGSFSSKHGRGCGGNATTSGGDPEKHRLLGDQKEAASCSQPLVKIKMTKRELE 60

Query: 72  DLVKKLEMQGMSLEQVIGRMVMNGEDEFEVEHHRSWRPSLQSIPEDY 118
            LVKKLEMQG++LEQVIGRM M GE+E+E+EHHRSWRPSLQSIPEDY
Sbjct: 61  VLVKKLEMQGLTLEQVIGRM-MKGEEEYEIEHHRSWRPSLQSIPEDY 106

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT4G21920.17.9e-1332.56unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin... [more]
AT3G20340.17.6e-0830.77Expression of the gene is downregulated in the presence of paraquat, an inducer ... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7UTK36.9e-4987.29DUF4228 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A6J1EYG43.4e-4885.22uncharacterized protein LOC111440057 OS=Cucurbita moschata OX=3662 GN=LOC1114400... [more]
A0A0A0LRL17.6e-4886.55Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G063490 PE=4 SV=1[more]
A0A6J1KIA51.7e-4785.22uncharacterized protein LOC111495485 OS=Cucurbita maxima OX=3661 GN=LOC111495485... [more]
A0A1S3BEX38.2e-4285.98uncharacterized protein LOC103489132 OS=Cucumis melo OX=3656 GN=LOC103489132 PE=... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 66..86
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..42
NoneNo IPR availablePANTHERPTHR33647:SF10DOMAIN PROTEIN, PUTATIVE-RELATEDcoord: 1..115
NoneNo IPR availablePANTHERPTHR33647OS01G0793900 PROTEINcoord: 1..115

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi08M001513Bhi08M001513mRNA