Bhi08G001456 (gene) Wax gourd (B227) v1

Overview


Name	Bhi08G001456
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Tryptophan synthase
Location	chr8: 51579091 .. 51580518 (+)
RNA-Seq Expression	Bhi08G001456
Synteny	Bhi08G001456

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCTATTATTTGACGGGCACAGTGGTAGGGCCGCATCCATGTCCAGATATGGTTAGGGAGTTTCAGTCCGTGATTGGGAAAGAGACGAGGAGACAAGCCATGGACAAATGGGGGGGCAAACCAGATGTGCTTTTGGCTTGCATTGGGAGTGGCTCAAATGCCTTGGGTCTCTTCCATGACTTCATCAAAGAACAAGATGTGAGGCTGATCGGAGTCGAGGCCGCCGGCTTTGGGTTGGACAGTGGAAAGCACTCTGCAACTTTATCTAAAGGTCATGTTGGGGTTTACCATGGTGCTTTGAGCTACCTTTTGCAAGATGATGAAGGCCAGATTTTGAACCCTCATTCCGTTGGTGTAGGGTAAGAAAAAAAACACCACTCTTAAAAAATATAGCAAAATTTAGATTCAACATTTGAAATCTATCTTGAATAGACTATATATATCACTAATAAGAGTTTATTATTAGTAAGATACACTAATTTACTATATCCTTTATGATTAATTCTTTCAAAATATTGATATGCACTTTTTAATTAACCCTAAAAGTAATATCTTTTGCATTTTTTTCCTTCTTTAATAAATGAAAATGAAAACTTATATATTACCAATAAATTCCAAAATTTATAATATACTGTTCTGGATTTTGTAAATCTTCTATTGAATTTTGTTGTTTGTTATCATTTCAAAAGGATTGATTTGAAATATGAAGTGATGTCACATCATATTTTTATATAGAAAAAATGCTCCTCTAGAATGGGCAGGATTTAAATTTAAAATTTGAAGACATACTTAACTAGCATCATTTGATTATATAACTATTTGGTTTTTTTAGTTTTAGTTTTTAGAAATGGTGCATATTTTCAAAGCTATGCAGACAACAAAATTTAGAAAGGAGCAAATGAAACTAGTATTGACTATAGAATTTAAATTTCAAATAACAAATAATTAATTATCAAATTGAGCCTAATTAGTAGATTTTCGAAACAAAAACTGAGATTCATTTCTGGAACATTCTTAATTACATTTAGGTGAGGGATATCGTCTTTGAATACACATTAATTAGAATTAATTGAGGTGTGCTCAATTTCGCATTAAATGGAGATAATTAGGCTTATCAAGATTTTAACAAGTTAGGAAAAGTAATTTGATCGATGGTGGTATTGAAATTGAACGCGCAGGCTGGAATATCCAGGAGTAGGGCCGGAACTGAGCTTTCTGAAAGAAAGTGGGAGAGCTGAATTCCACACGGCGTCCGACACGGAGGCGGTAGAAGCTTACAAACGGCTTTGCAAGTTGGAAGGCATATTCCCATCGTTGGAGGCTTCTCATGCCTTTGCTTATCTTAATAAGCTTTGCCCCACTCTGCCAGACGGCTCCAAGGTGGTAGTTAATTGCAGTGGTCGTGGTGATAAAGACGCTGCTATT

mRNA sequence

ATGAGCTATTATTTGACGGGCACAGTGGTAGGGCCGCATCCATGTCCAGATATGGTTAGGGAGTTTCAGTCCGTGATTGGGAAAGAGACGAGGAGACAAGCCATGGACAAATGGGGGGGCAAACCAGATGTGCTTTTGGCTTGCATTGGGAGTGGCTCAAATGCCTTGGGTCTCTTCCATGACTTCATCAAAGAACAAGATGTGAGGCTGATCGGAGTCGAGGCCGCCGGCTTTGGGTTGGACAGTGGAAAGCACTCTGCAACTTTATCTAAAGGTCATGTTGGGGTTTACCATGGTGCTTTGAGCTACCTTTTGCAAGATGATGAAGGCCAGATTTTGAACCCTCATTCCGTTGGTGTAGGGCTGGAATATCCAGGAGTAGGGCCGGAACTGAGCTTTCTGAAAGAAAGTGGGAGAGCTGAATTCCACACGGCGTCCGACACGGAGGCGGTAGAAGCTTACAAACGGCTTTGCAAGTTGGAAGGCATATTCCCATCGTTGGAGGCTTCTCATGCCTTTGCTTATCTTAATAAGCTTTGCCCCACTCTGCCAGACGGCTCCAAGGTGGTAGTTAATTGCAGTGGTCGTGGTGATAAAGACGCTGCTATT

Coding sequence (CDS)

ATGAGCTATTATTTGACGGGCACAGTGGTAGGGCCGCATCCATGTCCAGATATGGTTAGGGAGTTTCAGTCCGTGATTGGGAAAGAGACGAGGAGACAAGCCATGGACAAATGGGGGGGCAAACCAGATGTGCTTTTGGCTTGCATTGGGAGTGGCTCAAATGCCTTGGGTCTCTTCCATGACTTCATCAAAGAACAAGATGTGAGGCTGATCGGAGTCGAGGCCGCCGGCTTTGGGTTGGACAGTGGAAAGCACTCTGCAACTTTATCTAAAGGTCATGTTGGGGTTTACCATGGTGCTTTGAGCTACCTTTTGCAAGATGATGAAGGCCAGATTTTGAACCCTCATTCCGTTGGTGTAGGGCTGGAATATCCAGGAGTAGGGCCGGAACTGAGCTTTCTGAAAGAAAGTGGGAGAGCTGAATTCCACACGGCGTCCGACACGGAGGCGGTAGAAGCTTACAAACGGCTTTGCAAGTTGGAAGGCATATTCCCATCGTTGGAGGCTTCTCATGCCTTTGCTTATCTTAATAAGCTTTGCCCCACTCTGCCAGACGGCTCCAAGGTGGTAGTTAATTGCAGTGGTCGTGGTGATAAAGACGCTGCTATT

Protein sequence

MSYYLTGTVVGPHPCPDMVREFQSVIGKETRRQAMDKWGGKPDVLLACIGSGSNALGLFHDFIKEQDVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILNPHSVGVGLEYPGVGPELSFLKESGRAEFHTASDTEAVEAYKRLCKLEGIFPSLEASHAFAYLNKLCPTLPDGSKVVVNCSGRGDKDAAI

Homology

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BLAST of Bhi08G001456 vs. TAIR 10
Match: AT5G28237.1 (Pyridoxal-5'-phosphate-dependent enzyme family protein )

HSP 1 Score: 340.1 bits (871), Expect = 1.2e-93
Identity = 156/199 (78.39%), Postives = 182/199 (91.46%), Query Frame = 0


Query: 2   SYYLTGTVVGPHPCPDMVREFQSVIGKETRRQAMDKWGGKPDVLLACIGSGSNALGLFHD 61
           +YYL+GTVVGPHPCP +VREFQSVIGKETRRQA   WGGKPDVL+AC+GSGSNALGLFH+
Sbjct: 253 TYYLSGTVVGPHPCPIIVREFQSVIGKETRRQAKQLWGGKPDVLVACVGSGSNALGLFHE 312

Query: 62  FIKEQDVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILNPHSVGVG 121
           F+ ++DVRL+GVEAAG GLDSGKHSATL+ G VGVYHG++SYLLQDD+GQIL PHSVGVG
Sbjct: 313 FVGDEDVRLVGVEAAGLGLDSGKHSATLAFGDVGVYHGSMSYLLQDDQGQILKPHSVGVG 372

Query: 122 LEYPGVGPELSFLKESGRAEFHTASDTEAVEAYKRLCKLEGIFPSLEASHAFAYLNKLCP 181
           LEYPGVGPE+SF+KE+GRAEF+TA+D EA++A  RL +LEGI P+LEASHA A+L+KL P
Sbjct: 373 LEYPGVGPEISFMKETGRAEFYTATDEEAIQACMRLSRLEGIIPALEASHALAFLDKLVP 432

Query: 182 TLPDGSKVVVNCSGRGDKD 201
           TL DG+KVVVNCSGRGDKD
Sbjct: 433 TLRDGAKVVVNCSGRGDKD 451

[Close]

BLAST of Bhi08G001456 vs. TAIR 10
Match: AT4G27070.1 (tryptophan synthase beta-subunit 2 )

HSP 1 Score: 315.5 bits (807), Expect = 3.2e-86
Identity = 139/199 (69.85%), Postives = 175/199 (87.94%), Query Frame = 0


Query: 2   SYYLTGTVVGPHPCPDMVREFQSVIGKETRRQAMDKWGGKPDVLLACIGSGSNALGLFHD 61
           ++Y+ G+V GPHP P MVR+F +VIGKETR+QAM+KWGGKPDVL+AC+G GSNA+GLFH+
Sbjct: 267 THYILGSVAGPHPYPMMVRDFHAVIGKETRKQAMEKWGGKPDVLVACVGGGSNAMGLFHE 326

Query: 62  FIKEQDVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILNPHSVGVG 121
           F+ + +VR+IGVEAAGFGLDSGKH+ATL+KG VGV HGA+SYLLQDD+GQI+ PHS+  G
Sbjct: 327 FVDDTEVRMIGVEAAGFGLDSGKHAATLTKGDVGVLHGAMSYLLQDDDGQIIEPHSISAG 386

Query: 122 LEYPGVGPELSFLKESGRAEFHTASDTEAVEAYKRLCKLEGIFPSLEASHAFAYLNKLCP 181
           L+YPGVGPE SFLK+ GRAE+ + +D EA+EA+KR+ +LEGI P+LE SHA A+L KLCP
Sbjct: 387 LDYPGVGPEHSFLKDVGRAEYFSVTDEEALEAFKRVSRLEGIIPALETSHALAHLEKLCP 446

Query: 182 TLPDGSKVVVNCSGRGDKD 201
           TLPDG++VV+N SGRGDKD
Sbjct: 447 TLPDGARVVLNFSGRGDKD 465

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BLAST of Bhi08G001456 vs. TAIR 10
Match: AT5G54810.1 (tryptophan synthase beta-subunit 1 )

HSP 1 Score: 313.2 bits (801), Expect = 1.6e-85
Identity = 137/199 (68.84%), Postives = 174/199 (87.44%), Query Frame = 0


Query: 2   SYYLTGTVVGPHPCPDMVREFQSVIGKETRRQAMDKWGGKPDVLLACIGSGSNALGLFHD 61
           ++Y+ G+V GPHP P MVR+F +VIGKETR+QA++KWGGKPDVL+AC+G GSNA+GLFH+
Sbjct: 262 THYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKWGGKPDVLVACVGGGSNAMGLFHE 321

Query: 62  FIKEQDVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILNPHSVGVG 121
           F+ + +VR+IGVEAAGFGLDSGKH+ATL+KG VGV HGA+SYLLQDD+GQI+ PHS+  G
Sbjct: 322 FVNDTEVRMIGVEAAGFGLDSGKHAATLTKGDVGVLHGAMSYLLQDDDGQIIEPHSISAG 381

Query: 122 LEYPGVGPELSFLKESGRAEFHTASDTEAVEAYKRLCKLEGIFPSLEASHAFAYLNKLCP 181
           L+YPGVGPE SF K+ GRAE+++ +D EA+EA+KR+ +LEGI P+LE SHA AYL KLCP
Sbjct: 382 LDYPGVGPEHSFFKDMGRAEYYSITDEEALEAFKRVSRLEGIIPALETSHALAYLEKLCP 441

Query: 182 TLPDGSKVVVNCSGRGDKD 201
           TL DG++VV+N SGRGDKD
Sbjct: 442 TLSDGTRVVLNFSGRGDKD 460

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BLAST of Bhi08G001456 vs. TAIR 10
Match: AT5G38530.1 (tryptophan synthase beta type 2 )

HSP 1 Score: 62.0 bits (149), Expect = 6.4e-10
Identity = 49/164 (29.88%), Postives = 76/164 (46.34%), Query Frame = 0


Query: 23  QSVIGKETRRQAMDKWGGKPDVLLACIGSGSNALGLFHDFIKEQDVRLIGVEAAGFGLDS 82
           Q++IG+E  +Q M+ +G  PD+++ C G GSN  GL   FI+E   +L G          
Sbjct: 292 QTIIGEECIQQ-MENFGETPDLIIGCTGGGSNFAGLSFPFIRE---KLKGKINPVIRAVE 351

Query: 83  GKHSATLSKGHVGVYHGALSYLLQDDEG--QILNPHSVG----------VGLEYPGVGPE 142
                +L+K   GVY    +Y   D  G   ++  H++G           GL Y G+ P 
Sbjct: 352 PSACPSLTK---GVY----AYDFGDTAGLTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPL 411

Query: 143 LSFLKESGRAEFHTASDTEAVEAYKRLCKLEGIFPSLEASHAFA 175
           +S + E G  E  +    E  +   +  + EGI P+ E +HA A
Sbjct: 412 ISHVYEQGFMEAISIPQIECFQGAIQFARTEGIIPAPEPTHAIA 444

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BLAST of Bhi08G001456 vs. ExPASy Swiss-Prot
Match: O50046 (Tryptophan synthase beta chain 2, chloroplastic OS=Camptotheca acuminata OX=16922 GN=TSB PE=2 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 1.7e-87
Identity = 142/199 (71.36%), Postives = 177/199 (88.94%), Query Frame = 0


Query: 2   SYYLTGTVVGPHPCPDMVREFQSVIGKETRRQAMDKWGGKPDVLLACIGSGSNALGLFHD 61
           ++Y+ G+V GPHP P MVREF +VIGKETR+QA++KWGGKPDVL+AC+G GSNA+GLFH+
Sbjct: 258 THYILGSVAGPHPYPMMVREFHAVIGKETRKQALEKWGGKPDVLVACVGGGSNAMGLFHE 317

Query: 62  FIKEQDVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILNPHSVGVG 121
           F+ ++DVR+IGVEAAGFGLDSGKH+ATL+KG VGV HGA+SYLLQDD+GQI+ PHS+  G
Sbjct: 318 FVDDKDVRMIGVEAAGFGLDSGKHAATLTKGEVGVLHGAMSYLLQDDDGQIIEPHSISAG 377

Query: 122 LEYPGVGPELSFLKESGRAEFHTASDTEAVEAYKRLCKLEGIFPSLEASHAFAYLNKLCP 181
           L+YPGVGPE SFLK+ GRAE++  +D EA+EA+KRL +LEGI P+LE SHA A+L KLCP
Sbjct: 378 LDYPGVGPEHSFLKDIGRAEYYCCTDEEALEAFKRLSRLEGIIPALETSHALAFLEKLCP 437

Query: 182 TLPDGSKVVVNCSGRGDKD 201
           TLP+G+KVV+NCSGRGDKD
Sbjct: 438 TLPNGTKVVLNCSGRGDKD 456

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BLAST of Bhi08G001456 vs. ExPASy Swiss-Prot
Match: P43283 (Tryptophan synthase beta chain 1 (Fragment) OS=Zea mays OX=4577 GN=TSB1 PE=2 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 2.0e-85
Identity = 139/199 (69.85%), Postives = 173/199 (86.93%), Query Frame = 0


Query: 2   SYYLTGTVVGPHPCPDMVREFQSVIGKETRRQAMDKWGGKPDVLLACIGSGSNALGLFHD 61
           ++Y+ G+V GPHP P MVREF  VIGKETRRQAM KWGGKPDVL+AC+G GSNA+GLFH+
Sbjct: 181 THYILGSVAGPHPYPMMVREFHKVIGKETRRQAMHKWGGKPDVLVACVGGGSNAMGLFHE 240

Query: 62  FIKEQDVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILNPHSVGVG 121
           F+++QDVRLIGVEAAG G+D+ KH+ATL+KG VGV HG++SYLLQDD+GQ++ PHS+  G
Sbjct: 241 FVEDQDVRLIGVEAAGHGVDTDKHAATLTKGQVGVLHGSMSYLLQDDDGQVIEPHSISAG 300

Query: 122 LEYPGVGPELSFLKESGRAEFHTASDTEAVEAYKRLCKLEGIFPSLEASHAFAYLNKLCP 181
           L+YPGVGPE SFLK+ GRAE+ + +D EA++A+KR+ +LEGI P+LE SHA AYL KLCP
Sbjct: 301 LDYPGVGPEHSFLKDIGRAEYDSVTDQEALDAFKRVSRLEGIIPALETSHALAYLEKLCP 360

Query: 182 TLPDGSKVVVNCSGRGDKD 201
           TLPDG +VV+NCSGRGDKD
Sbjct: 361 TLPDGVRVVLNCSGRGDKD 379

[Close]

BLAST of Bhi08G001456 vs. ExPASy Swiss-Prot
Match: P43284 (Tryptophan synthase beta chain 2, chloroplastic (Fragment) OS=Zea mays OX=4577 GN=TSB2 PE=2 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 3.4e-85
Identity = 138/199 (69.35%), Postives = 173/199 (86.93%), Query Frame = 0


Query: 2   SYYLTGTVVGPHPCPDMVREFQSVIGKETRRQAMDKWGGKPDVLLACIGSGSNALGLFHD 61
           ++Y+ G+V GPHP P MVREF  VIGKETRRQAMDKWGGKPDVL+AC+G GSNA+GLFH+
Sbjct: 235 THYILGSVAGPHPYPMMVREFHKVIGKETRRQAMDKWGGKPDVLVACVGGGSNAMGLFHE 294

Query: 62  FIKEQDVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILNPHSVGVG 121
           F+++QDVRL+G+EAAG G+D+ KH+ATL+KG VGV HG++SYLLQDD+GQ++ PHS+  G
Sbjct: 295 FVEDQDVRLVGLEAAGHGVDTDKHAATLTKGQVGVLHGSMSYLLQDDDGQVIEPHSISAG 354

Query: 122 LEYPGVGPELSFLKESGRAEFHTASDTEAVEAYKRLCKLEGIFPSLEASHAFAYLNKLCP 181
           L+YPGVGPE SFLK+ GRAE+ + +D EA++A+KR+ +LEGI P+LE SHA AYL KLCP
Sbjct: 355 LDYPGVGPEHSFLKDIGRAEYDSVTDQEALDAFKRVSRLEGIIPALETSHALAYLEKLCP 414

Query: 182 TLPDGSKVVVNCSGRGDKD 201
           TL DG +VVVNCSGRGDKD
Sbjct: 415 TLADGVRVVVNCSGRGDKD 433

[Close]

BLAST of Bhi08G001456 vs. ExPASy Swiss-Prot
Match: P25269 (Tryptophan synthase beta chain 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TSB2 PE=1 SV=2)

HSP 1 Score: 315.5 bits (807), Expect = 4.5e-85
Identity = 139/199 (69.85%), Postives = 175/199 (87.94%), Query Frame = 0


Query: 2   SYYLTGTVVGPHPCPDMVREFQSVIGKETRRQAMDKWGGKPDVLLACIGSGSNALGLFHD 61
           ++Y+ G+V GPHP P MVR+F +VIGKETR+QAM+KWGGKPDVL+AC+G GSNA+GLFH+
Sbjct: 267 THYILGSVAGPHPYPMMVRDFHAVIGKETRKQAMEKWGGKPDVLVACVGGGSNAMGLFHE 326

Query: 62  FIKEQDVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILNPHSVGVG 121
           F+ + +VR+IGVEAAGFGLDSGKH+ATL+KG VGV HGA+SYLLQDD+GQI+ PHS+  G
Sbjct: 327 FVDDTEVRMIGVEAAGFGLDSGKHAATLTKGDVGVLHGAMSYLLQDDDGQIIEPHSISAG 386

Query: 122 LEYPGVGPELSFLKESGRAEFHTASDTEAVEAYKRLCKLEGIFPSLEASHAFAYLNKLCP 181
           L+YPGVGPE SFLK+ GRAE+ + +D EA+EA+KR+ +LEGI P+LE SHA A+L KLCP
Sbjct: 387 LDYPGVGPEHSFLKDVGRAEYFSVTDEEALEAFKRVSRLEGIIPALETSHALAHLEKLCP 446

Query: 182 TLPDGSKVVVNCSGRGDKD 201
           TLPDG++VV+N SGRGDKD
Sbjct: 447 TLPDGARVVLNFSGRGDKD 465

[Close]

BLAST of Bhi08G001456 vs. ExPASy Swiss-Prot
Match: P14671 (Tryptophan synthase beta chain 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TSB1 PE=2 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 2.2e-84
Identity = 137/199 (68.84%), Postives = 174/199 (87.44%), Query Frame = 0


Query: 2   SYYLTGTVVGPHPCPDMVREFQSVIGKETRRQAMDKWGGKPDVLLACIGSGSNALGLFHD 61
           ++Y+ G+V GPHP P MVR+F +VIGKETR+QA++KWGGKPDVL+AC+G GSNA+GLFH+
Sbjct: 262 THYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKWGGKPDVLVACVGGGSNAMGLFHE 321

Query: 62  FIKEQDVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILNPHSVGVG 121
           F+ + +VR+IGVEAAGFGLDSGKH+ATL+KG VGV HGA+SYLLQDD+GQI+ PHS+  G
Sbjct: 322 FVNDTEVRMIGVEAAGFGLDSGKHAATLTKGDVGVLHGAMSYLLQDDDGQIIEPHSISAG 381

Query: 122 LEYPGVGPELSFLKESGRAEFHTASDTEAVEAYKRLCKLEGIFPSLEASHAFAYLNKLCP 181
           L+YPGVGPE SF K+ GRAE+++ +D EA+EA+KR+ +LEGI P+LE SHA AYL KLCP
Sbjct: 382 LDYPGVGPEHSFFKDMGRAEYYSITDEEALEAFKRVSRLEGIIPALETSHALAYLEKLCP 441

Query: 182 TLPDGSKVVVNCSGRGDKD 201
           TL DG++VV+N SGRGDKD
Sbjct: 442 TLSDGTRVVLNFSGRGDKD 460

[Close]

BLAST of Bhi08G001456 vs. ExPASy TrEMBL
Match: A0A5D3BMJ6 (Tryptophan synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005960 PE=3 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 9.7e-107
Identity = 190/202 (94.06%), Postives = 195/202 (96.53%), Query Frame = 0


Query: 2   SYYLTGTVVGPHPCPDMVREFQSVIGKETRRQAMDKWGGKPDVLLACIGSGSNALGLFHD 61
           SYYLTGTVVGP+PCP MVREFQSVIGKETRRQA +KWG KPDVLLACIGSGSNALGLFH+
Sbjct: 246 SYYLTGTVVGPYPCPAMVREFQSVIGKETRRQAKEKWGAKPDVLLACIGSGSNALGLFHE 305

Query: 62  FIKEQDVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILNPHSVGVG 121
           FI E+DVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILNPHSVGVG
Sbjct: 306 FINEKDVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILNPHSVGVG 365

Query: 122 LEYPGVGPELSFLKESGRAEFHTASDTEAVEAYKRLCKLEGIFPSLEASHAFAYLNKLCP 181
           LEYPGVGPELSFLKESGRAEF TASDTEAVEAYKRL KLEGIFPSLEASHAFAYL+KLCP
Sbjct: 366 LEYPGVGPELSFLKESGRAEFETASDTEAVEAYKRLAKLEGIFPSLEASHAFAYLHKLCP 425

Query: 182 TLPDGSKVVVNCSGRGDKDAAI 204
           TLPDG KVVVNCSGRGDKDAAI
Sbjct: 426 TLPDGCKVVVNCSGRGDKDAAI 447

[Close]

BLAST of Bhi08G001456 vs. ExPASy TrEMBL
Match: A0A1S3B3A1 (Tryptophan synthase OS=Cucumis melo OX=3656 GN=LOC103485497 PE=3 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 9.7e-107
Identity = 190/202 (94.06%), Postives = 195/202 (96.53%), Query Frame = 0


Query: 2   SYYLTGTVVGPHPCPDMVREFQSVIGKETRRQAMDKWGGKPDVLLACIGSGSNALGLFHD 61
           SYYLTGTVVGP+PCP MVREFQSVIGKETRRQA +KWG KPDVLLACIGSGSNALGLFH+
Sbjct: 245 SYYLTGTVVGPYPCPAMVREFQSVIGKETRRQAKEKWGAKPDVLLACIGSGSNALGLFHE 304

Query: 62  FIKEQDVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILNPHSVGVG 121
           FI E+DVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILNPHSVGVG
Sbjct: 305 FINEKDVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILNPHSVGVG 364

Query: 122 LEYPGVGPELSFLKESGRAEFHTASDTEAVEAYKRLCKLEGIFPSLEASHAFAYLNKLCP 181
           LEYPGVGPELSFLKESGRAEF TASDTEAVEAYKRL KLEGIFPSLEASHAFAYL+KLCP
Sbjct: 365 LEYPGVGPELSFLKESGRAEFETASDTEAVEAYKRLAKLEGIFPSLEASHAFAYLHKLCP 424

Query: 182 TLPDGSKVVVNCSGRGDKDAAI 204
           TLPDG KVVVNCSGRGDKDAAI
Sbjct: 425 TLPDGCKVVVNCSGRGDKDAAI 446

[Close]

BLAST of Bhi08G001456 vs. ExPASy TrEMBL
Match: A0A0A0LUA1 (Tryptophan synthase OS=Cucumis sativus OX=3659 GN=Csa_1G064170 PE=3 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 1.3e-106
Identity = 189/202 (93.56%), Postives = 195/202 (96.53%), Query Frame = 0


Query: 2   SYYLTGTVVGPHPCPDMVREFQSVIGKETRRQAMDKWGGKPDVLLACIGSGSNALGLFHD 61
           SYYLTGTVVGPHPCP MVREFQSVIGKETRRQAM+KWG KPDVLLACIGSGSNALGLFH+
Sbjct: 245 SYYLTGTVVGPHPCPAMVREFQSVIGKETRRQAMEKWGAKPDVLLACIGSGSNALGLFHE 304

Query: 62  FIKEQDVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILNPHSVGVG 121
           FI E+DVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILNPHSVGVG
Sbjct: 305 FINEKDVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILNPHSVGVG 364

Query: 122 LEYPGVGPELSFLKESGRAEFHTASDTEAVEAYKRLCKLEGIFPSLEASHAFAYLNKLCP 181
           LEYPGVGPELSFLK+SGRAEF TASDTEAVEAYK L KLEGIFP+LEASHAFAYL+KLCP
Sbjct: 365 LEYPGVGPELSFLKDSGRAEFETASDTEAVEAYKLLAKLEGIFPALEASHAFAYLHKLCP 424

Query: 182 TLPDGSKVVVNCSGRGDKDAAI 204
           TLPDG KVVVNCSGRGDKDAAI
Sbjct: 425 TLPDGCKVVVNCSGRGDKDAAI 446

[Close]

BLAST of Bhi08G001456 vs. ExPASy TrEMBL
Match: A0A6J1GTV6 (Tryptophan synthase OS=Cucurbita moschata OX=3662 GN=LOC111457069 PE=3 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 5.3e-105
Identity = 186/202 (92.08%), Postives = 195/202 (96.53%), Query Frame = 0


Query: 2   SYYLTGTVVGPHPCPDMVREFQSVIGKETRRQAMDKWGGKPDVLLACIGSGSNALGLFHD 61
           SYYLTGTVVGPHPCP MVREFQSVIGKETR+QAM+KWGG PDVL+ACIGSGSNALGLF++
Sbjct: 248 SYYLTGTVVGPHPCPAMVREFQSVIGKETRKQAMEKWGGLPDVLVACIGSGSNALGLFNE 307

Query: 62  FIKEQDVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILNPHSVGVG 121
           FIKE+DVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQIL PHSVGVG
Sbjct: 308 FIKEEDVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILVPHSVGVG 367

Query: 122 LEYPGVGPELSFLKESGRAEFHTASDTEAVEAYKRLCKLEGIFPSLEASHAFAYLNKLCP 181
           LEYPGVGPELSFLKESGRAEFHTA D EAVEAYKR+C+LEGIFPSLEASHAFAYL+KLCP
Sbjct: 368 LEYPGVGPELSFLKESGRAEFHTAIDKEAVEAYKRVCRLEGIFPSLEASHAFAYLDKLCP 427

Query: 182 TLPDGSKVVVNCSGRGDKDAAI 204
           TL DG KVVVNCSGRGDKDAAI
Sbjct: 428 TLRDGCKVVVNCSGRGDKDAAI 449

[Close]

BLAST of Bhi08G001456 vs. ExPASy TrEMBL
Match: A0A6J1K0T4 (Tryptophan synthase OS=Cucurbita maxima OX=3661 GN=LOC111490065 PE=3 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 9.0e-105
Identity = 186/203 (91.63%), Postives = 195/203 (96.06%), Query Frame = 0


Query: 1   MSYYLTGTVVGPHPCPDMVREFQSVIGKETRRQAMDKWGGKPDVLLACIGSGSNALGLFH 60
           MSYYL GTVVGPHPCP MVREFQSVIGKETR+QAM+KWGG PDVL+ACIGSGSNALGLF+
Sbjct: 247 MSYYLMGTVVGPHPCPAMVREFQSVIGKETRKQAMEKWGGLPDVLVACIGSGSNALGLFN 306

Query: 61  DFIKEQDVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILNPHSVGV 120
           +FIKE+DVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQD+EGQIL PHSVGV
Sbjct: 307 EFIKEEDVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDEEGQILVPHSVGV 366

Query: 121 GLEYPGVGPELSFLKESGRAEFHTASDTEAVEAYKRLCKLEGIFPSLEASHAFAYLNKLC 180
           GLEYPGVGPELSFLKESGRAEFHTA D EAVEAYKR+CKLEGIFPSLEASHAFAYL+KLC
Sbjct: 367 GLEYPGVGPELSFLKESGRAEFHTAIDKEAVEAYKRVCKLEGIFPSLEASHAFAYLDKLC 426

Query: 181 PTLPDGSKVVVNCSGRGDKDAAI 204
           PTL DG KVVVNCSGRGDKDAAI
Sbjct: 427 PTLRDGCKVVVNCSGRGDKDAAI 449

The following BLAST results are available for this feature:

BLAST of Bhi08G001456 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G28237.1	1.2e-93	78.39	Pyridoxal-5'-phosphate-dependent enzyme family protein	[more]
AT4G27070.1	3.2e-86	69.85	tryptophan synthase beta-subunit 2	[more]
AT5G54810.1	1.6e-85	68.84	tryptophan synthase beta-subunit 1	[more]
AT5G38530.1	6.4e-10	29.88	tryptophan synthase beta type 2	[more]

BLAST of Bhi08G001456 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O50046	1.7e-87	71.36	Tryptophan synthase beta chain 2, chloroplastic OS=Camptotheca acuminata OX=1692...	[more]
P43283	2.0e-85	69.85	Tryptophan synthase beta chain 1 (Fragment) OS=Zea mays OX=4577 GN=TSB1 PE=2 SV=...	[more]
P43284	3.4e-85	69.35	Tryptophan synthase beta chain 2, chloroplastic (Fragment) OS=Zea mays OX=4577 G...	[more]
P25269	4.5e-85	69.85	Tryptophan synthase beta chain 2, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
P14671	2.2e-84	68.84	Tryptophan synthase beta chain 1, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Bhi08G001456 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BMJ6	9.7e-107	94.06	Tryptophan synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G...	[more]
A0A1S3B3A1	9.7e-107	94.06	Tryptophan synthase OS=Cucumis melo OX=3656 GN=LOC103485497 PE=3 SV=1	[more]
A0A0A0LUA1	1.3e-106	93.56	Tryptophan synthase OS=Cucumis sativus OX=3659 GN=Csa_1G064170 PE=3 SV=1	[more]
A0A6J1GTV6	5.3e-105	92.08	Tryptophan synthase OS=Cucurbita moschata OX=3662 GN=LOC111457069 PE=3 SV=1	[more]
A0A6J1K0T4	9.0e-105	91.63	Tryptophan synthase OS=Cucurbita maxima OX=3661 GN=LOC111490065 PE=3 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001926	Pyridoxal-phosphate dependent enzyme	PFAM	PF00291	PALP	coord: 10..195 e-value: 3.9E-17 score: 62.6
IPR036052	Tryptophan synthase beta subunit-like PLP-dependent enzyme	GENE3D	3.40.50.1100		coord: 21..203 e-value: 3.8E-76 score: 257.4
IPR036052	Tryptophan synthase beta subunit-like PLP-dependent enzyme	GENE3D	3.40.50.1100		coord: 1..20 e-value: 1.8E-5 score: 26.6
IPR036052	Tryptophan synthase beta subunit-like PLP-dependent enzyme	SUPERFAMILY	53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes	coord: 3..201
None	No IPR available	PANTHER	PTHR48077:SF4	TRYPTOPHAN SYNTHASE	coord: 2..202
None	No IPR available	PANTHER	PTHR48077	TRYPTOPHAN SYNTHASE-RELATED	coord: 2..202

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi08M001456	Bhi08M001456	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000162	tryptophan biosynthetic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0004834	tryptophan synthase activity