Bhi08G001204 (gene) Wax gourd (B227) v1

Overview


Name	Bhi08G001204
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Ribosomal RNA small subunit methyltransferase G
Location	chr8: 42612429 .. 42616597 (-)
RNA-Seq Expression	Bhi08G001204
Synteny	Bhi08G001204

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCGCCGGGTCGGGTCTCGTTGCGTTGAGTTCGGGTTGGATTTTTGGGCTTTTAATGGGTCAACTCGTTGGGCTGAAAGTGGGCCGAGACGGAAGGCCCAGTTGGCAACCTATCGGACGACAAGTCGTCAAGATACGAAGGAGAAGAGAATCGGGGTGCGGAAGAGAGGCCAAAGAGCGCGGGAAGATGGCAACTACAGTCTCGTTCTCTTTGAGGACTTTTATCAAACAGTTTTCGGCTCTTTCGAAGCCAACGGCGTTCAATTTTCCCGTCAGAACCAGCTTCAAGCGACTCAACGTTACATGCAGTACTACGAGATATCTCCATTTTGAAACCCTAACTTCCCGCCAAAAAGACCAGGTTCATCTTTTCGTCGACGCTCTTCTTCAATGGAACCAGGTGCTTGGGTCGCTGTCTTACAGTGGTTTCATTTCCTGAAATTTATTGCTGTTTCTTGTCGTTAGCTTTAATTTGATGGCTGTATGGTTGAATTCTGGTAGAAAATGAATCTTACGGCTGTGACGGAAGTAAGCGAAGTGATGGAAAGGCACGTCGAGGATTCTCTCGCGATTATACCGCCAATTCGGAATCTGTACTTGTCGCATTGTTCGACTATTTCATGCGATGACATTAAACTCGTTGATGTTGGAACGGGGGCCGGGCTTCCTGGATTGATTATAGCTATTGCTTGCCCAGGTGAACATAATCGATTACTATGATGATGAAAATGCTTTATTTGCGCGAGGGATTATTCTGTGATATGAGCAATATTGATTGCATCCTTAACCTTTATTTTCTTTTGGGGATTTAACTATGGCTATTTGGATGGACTAGAATGGCAAGTAACGTTGATGGAGTCTATGAATAAGCGGTGTGTTTTCTTGGAGCATGCAGTGGGTCATACCGGTTTGACAAATGTTCAAGTTGTGCGAGGAAGGGCAGAGGTAAGTGGACATTGCGTTTACGCAATTAAACACCCTGGCCTGTTTAGCCATTCAAGTTTGATTCTCTTGTCTCGATTAGTTCATATACTTGGTAATTAGTCTCGATTTTATTGGATAATGAACAAAATTTCTTGATTTTTCGATGTACCAATGGTGCTTTTCTTCAAAAATGTGGAAGGGGTTTTTTGCTTGAGTTATGGTAAAGATATTTGCATGTTCAACAGTTCCTCTAGGATAGAGCTGGCAGCAGTCTCGAATTCATCATTATATTCACTGTATTGTAAATACTTGAAGAAGTTGAAGTTATAAATGAGGGTTACCTTTTATATATATATATATATATAAACAAATGAGGGTTGCCCTTGAGACTAATTTTTATTTTATCTTAGCATAATTGTAATGGATAGCACTTCTAAGGATAATAATTAAGTGTATAACAACATTTGAAAGAATTGCACATATAGCAAAATCTATCATTGATAAACTCTATTGCTGATAGACTCCTATCAATGATAGACTCTCTCGCTGATAAGCTCCTATCGGGGATATAGTCTATTGTTGATAAACTCCGAGAGTTGGATCTAAATTTTGATATATTTGTCAATTCTTTTGCACTGTGCTATATCTGCTAATACTTTAAGCATGATTCCTATATTTGCAATTGCACCTTCATATTATGTATTATTATCTTATTTTCATCGAGAGAATAGAGCGTCTATATTGAAATGGTTTTATTGTTCCGTTGCGGGCATATAACAAATCAATTTCTCTCTTCTTCGATCTGTAAGTTTGATTTTTCGTCAAGCAATTTACAGGTTCGATGAGGAAGGATTTCTACATTCGTTTCCTTTTTTCCTTATATTATGTATTGTTATCTTTTGAGAGAGAAGGGGAAGAACACCTGCTCATGTCTCCAAACTTTTTTGTTTAATATTTAATGTGGCAGTGATATATCCTGATGTAGGGCAGAATTTGGGACATGATCTTTGCTTACGAGAGAAATTTGATGTAGTAGTGGCTAGAGCTGTTGCAGAAATGAGAGTTTTAGGTACCATCTTACCTAAATGTGATATATATAACTTCTACAGATCTTCAAGGCATTTTTTGTTTTATGCTTCTTATTTTTCTTTGGTATCTTTTCTTTCAGCTGAATATTGTCTTCCTATGGTTCGTGTTGGTGGTTTGTTTTTAGCTGCCAAGGGTCATGATCCTCTCGTATGTTCTCCATCCATTAATATTATGAACGTCTACTCTCTTATCGCATTGTTCTATTTTATTGGGAGTCCGGGACTGTATGCACGTCATTACCATCATTGATACTGTTATAGCTGTTTTGAGGTAGAGGTATTTGATGTGAAAATCCCGTCCACTTCAATTATTTGCAGTTTCTTGTTTTATTGAAAGTACTTCCTTACAAATTATAATGCACAACAGGATATTAACTTTTATATTGTCAACCTGAAGTATACGGATAGATGCTATACAATATTGTAATGAATGATATAAATATATAGATATTGTGGTTGCGGATAGGTGGTAATTGTATATTTCTTACTACCATTGAAATAGACTCCTCTTGATTTAGGTCAGACCTCTTGTATACTTCGTGATATTGATGCTACGGAGAATCTTGTTTCAATTCAAATTATGTAGATTTCTCTGAACTGAATTATTTAGAGTTGGAATATATCTGTCTAATTCAGTTTGAGAATAGTAGGTTCATTTGGATTTTAATTTTTAATAATCTTGTTGATTTTTAGTTTGTTTCGTTTTTTGTTGCATGACTTATTCATTCTAGAATTGTTCGTATTGACAGGCAGAAGTAACAAATGCAGAAAAGGCAATTGAAATGATGGGTGCCTCCTTACTCCAAATATGCCCTGGTGCGTTTGTCTTTTTATTGGTCTTCCTGCAATGTGGTAATCGCATGTGTACAGTAATGAAGTCAGCAGATTTGTGTGTCCTTGAGGATTGCTTTATGGTACAGAGGTCTCCTCTTGAAAAGACACTCCCACTTTAAGCCCGTAGCCAGTTGGTTTTCTAGATACTTCTACTTAGTTATTCCAATGTGTACTTGAACTACAAGAAATTTTCTGACGCTGGCAATTTCTGCTACCATAGCATCTATATATGCACGTAATGTAAAAACTATAGGATTTGCCAGTAATCTTTGGAATTTGCACCCGTCCCAGTGAATTCTGTCAAGCTTATTTTGCTTGTCTTGTTTGGAAGAATTTGAATCTTTGTTTTAATGTTTGGTTTGATTTGACTGGATTTTCTTTGATCCTAACATATGGGTTCATCTAATTTGCATGCGGAACTCCCTAAATTGTAGTATTCTTGTGGAAAAATCTTTTTCTCGAGCAAAGTTTGATTTAGAATTATTTTCTCAAATAATCATACTGGATATTTTTATTTTTAGTTCGATCCATGAAGTATTTCCAACTTATGCTTTAGCTTAACTTTACCCTCCTCTCTATATTGTCTAATGATCCCTTATTTACTTATGCAGTGGAATCGCATAGTCCATATGGGCAGCGAACTGCGGTTGTTTGTTTAAAAGAACGACACACTCCGAGGAAGTATCCTCGTGATCCAGGTACTCCAGCGAAAGCCCCATTATAGATTCTCTGGGCGTTCAGTTTGGTTTCAGTGCATGTGTTCTTCACAACGTCAACCGGTTGTTCATTATGCAAAATGCTTCAAGAAAGTGAGTCTGCGATTATCACCTGAAGATAGGCACCTTATTATTTGTTGTGCATATAAAATATCATTTCACGCCGTATAATTCGCACGTGACATTTGTTTATTGAATTCGTATGAAGCATTTATTTCCTCAGCACCCGTTCTGGATTTACGTGTTGGTCTTTCTCCCTCCTGCCATTATCCCCATCAAGTTCATCTCTTTCTCTACACCGACATACATAACTCCACCCCCGAAAAGGAAGGGATGTGAAATTTGTACCGTTCTCAATCTCGTCCAGCTAAAAAATTGTCCAAAATCTAATCAATAAAATACCTAAAATTGGGCAACAAAAACTCTACCTAACTACAAAAACACTTGCCCCAAACAACAAATCAAATGGTTAAAGAAATGTACCAAATGTGCAAATCTAATTTTTAAAAAAATTTCCAAACACATACAAATTTAGGTCTCATTTGGTAATCATTTAGTTTTTTTTTTTTGTTTTTAAAAATTAAGCCTATAGACACTACTTCCAC

mRNA sequence

ATGTTCGCCGGGTCGGGTCTCGTTGCGTTGAGTTCGGGTTGGATTTTTGGGCTTTTAATGGGTCAACTCGTTGGGCTGAAAGTGGGCCGAGACGGAAGGCCCAGTTGGCAACCTATCGGACGACAAGTCGTCAAGATACGAAGGAGAAGAGAATCGGGGTGCGGAAGAGAGGCCAAAGAGCGCGGGAAGATGGCAACTACAGTCTCGTTCTCTTTGAGGACTTTTATCAAACAGTTTTCGGCTCTTTCGAAGCCAACGGCGTTCAATTTTCCCGTCAGAACCAGCTTCAAGCGACTCAACGTTACATGCAGTACTACGAGATATCTCCATTTTGAAACCCTAACTTCCCGCCAAAAAGACCAGGTTCATCTTTTCGTCGACGCTCTTCTTCAATGGAACCAGAAAATGAATCTTACGGCTGTGACGGAAGTAAGCGAAGTGATGGAAAGGCACGTCGAGGATTCTCTCGCGATTATACCGCCAATTCGGAATCTGTACTTGTCGCATTGTTCGACTATTTCATGCGATGACATTAAACTCGTTGATGTTGGAACGGGGGCCGGGCTTCCTGGATTGATTATAGCTATTGCTTGCCCAGAATGGCAAGTAACGTTGATGGAGTCTATGAATAAGCGGTGTGTTTTCTTGGAGCATGCAGTGGGTCATACCGGTTTGACAAATGTTCAAGTTGTGCGAGGAAGGGCAGAGAATTTGGGACATGATCTTTGCTTACGAGAGAAATTTGATGTAGTAGTGGCTAGAGCTGTTGCAGAAATGAGAGTTTTAGCTGAATATTGTCTTCCTATGGTTCGTGTTGGTGGTTTGTTTTTAGCTGCCAAGGGTCATGATCCTCTCGCAGAAGTAACAAATGCAGAAAAGGCAATTGAAATGATGGGTGCCTCCTTACTCCAAATATGCCCTGTGGAATCGCATAGTCCATATGGGCAGCGAACTGCGGTTGTTTGTTTAAAAGAACGACACACTCCGAGGAAGTATCCTCGTGATCCAGGTACTCCAGCGAAAGCCCCATTATAGATTCTCTGGGCGTTCAGTTTGGTTTCAGTGCATGTGTTCTTCACAACGTCAACCGGTTGTTCATTATGCAAAATGCTTCAAGAAAGTGAGTCTGCGATTATCACCTGAAGATAGGCACCTTATTATTTGTTGTGCATATAAAATATCATTTCACGCCGTATAATTCGCACGTGACATTTGTTTATTGAATTCGTATGAAGCATTTATTTCCTCAGCACCCGTTCTGGATTTACGTGTTGGTCTTTCTCCCTCCTGCCATTATCCCCATCAAGTTCATCTCTTTCTCTACACCGACATACATAACTCCACCCCCGAAAAGGAAGGGATGTGAAATTTGTACCGTTCTCAATCTCGTCCAGCTAAAAAATTGTCCAAAATCTAATCAATAAAATACCTAAAATTGGGCAACAAAAACTCTACCTAACTACAAAAACACTTGCCCCAAACAACAAATCAAATGGTTAAAGAAATGTACCAAATGTGCAAATCTAATTTTTAAAAAAATTTCCAAACACATACAAATTTAGGTCTCATTTGGTAATCATTTAGTTTTTTTTTTTTGTTTTTAAAAATTAAGCCTATAGACACTACTTCCAC

Coding sequence (CDS)

ATGTTCGCCGGGTCGGGTCTCGTTGCGTTGAGTTCGGGTTGGATTTTTGGGCTTTTAATGGGTCAACTCGTTGGGCTGAAAGTGGGCCGAGACGGAAGGCCCAGTTGGCAACCTATCGGACGACAAGTCGTCAAGATACGAAGGAGAAGAGAATCGGGGTGCGGAAGAGAGGCCAAAGAGCGCGGGAAGATGGCAACTACAGTCTCGTTCTCTTTGAGGACTTTTATCAAACAGTTTTCGGCTCTTTCGAAGCCAACGGCGTTCAATTTTCCCGTCAGAACCAGCTTCAAGCGACTCAACGTTACATGCAGTACTACGAGATATCTCCATTTTGAAACCCTAACTTCCCGCCAAAAAGACCAGGTTCATCTTTTCGTCGACGCTCTTCTTCAATGGAACCAGAAAATGAATCTTACGGCTGTGACGGAAGTAAGCGAAGTGATGGAAAGGCACGTCGAGGATTCTCTCGCGATTATACCGCCAATTCGGAATCTGTACTTGTCGCATTGTTCGACTATTTCATGCGATGACATTAAACTCGTTGATGTTGGAACGGGGGCCGGGCTTCCTGGATTGATTATAGCTATTGCTTGCCCAGAATGGCAAGTAACGTTGATGGAGTCTATGAATAAGCGGTGTGTTTTCTTGGAGCATGCAGTGGGTCATACCGGTTTGACAAATGTTCAAGTTGTGCGAGGAAGGGCAGAGAATTTGGGACATGATCTTTGCTTACGAGAGAAATTTGATGTAGTAGTGGCTAGAGCTGTTGCAGAAATGAGAGTTTTAGCTGAATATTGTCTTCCTATGGTTCGTGTTGGTGGTTTGTTTTTAGCTGCCAAGGGTCATGATCCTCTCGCAGAAGTAACAAATGCAGAAAAGGCAATTGAAATGATGGGTGCCTCCTTACTCCAAATATGCCCTGTGGAATCGCATAGTCCATATGGGCAGCGAACTGCGGTTGTTTGTTTAAAAGAACGACACACTCCGAGGAAGTATCCTCGTGATCCAGGTACTCCAGCGAAAGCCCCATTATAG

Protein sequence

MFAGSGLVALSSGWIFGLLMGQLVGLKVGRDGRPSWQPIGRQVVKIRRRRESGCGREAKERGKMATTVSFSLRTFIKQFSALSKPTAFNFPVRTSFKRLNVTCSTTRYLHFETLTSRQKDQVHLFVDALLQWNQKMNLTAVTEVSEVMERHVEDSLAIIPPIRNLYLSHCSTISCDDIKLVDVGTGAGLPGLIIAIACPEWQVTLMESMNKRCVFLEHAVGHTGLTNVQVVRGRAENLGHDLCLREKFDVVVARAVAEMRVLAEYCLPMVRVGGLFLAAKGHDPLAEVTNAEKAIEMMGASLLQICPVESHSPYGQRTAVVCLKERHTPRKYPRDPGTPAKAPL

Homology

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BLAST of Bhi08G001204 vs. TAIR 10
Match: AT5G50110.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein )

HSP 1 Score: 352.8 bits (904), Expect = 3.1e-97
Identity = 173/253 (68.38%), Postives = 206/253 (81.42%), Query Frame = 0


Query: 93  RTSFKRL-NVTCSTTRYLHFETLTSRQKDQVHLFVDALLQWNQKMNLTAVTEVSEVMERH 152
           R  +K L N T STT    F+TL+S Q+DQ+HL+VD LLQWNQKMNLTA  E  EVMERH
Sbjct: 42  RFHYKALSNATVSTTASC-FKTLSSSQQDQIHLYVDTLLQWNQKMNLTATKEADEVMERH 101

Query: 153 VEDSLAIIPPIRNLYLSHCSTISCDDIKLVDVGTGAGLPGLIIAIACPEWQVTLMESMNK 212
           +EDSLAI+PPI+  Y  H S +  D I L+DVG+GAGLPGL++AIACP+W+VTL+ES+NK
Sbjct: 102 IEDSLAILPPIKTCYNLHSSDL-FDHINLIDVGSGAGLPGLVLAIACPDWRVTLLESINK 161

Query: 213 RCVFLEHAVGHTGLTNVQVVRGRAENLGHDLCLREKFDVVVARAVAEMRVLAEYCLPMVR 272
           RCVFLEH V  TGLTNV +VRGRAE+ GHD+  REKFDV +ARAVAEMRVLAEYCLP+VR
Sbjct: 162 RCVFLEHVVNVTGLTNVTIVRGRAESCGHDVMYREKFDVAIARAVAEMRVLAEYCLPLVR 221

Query: 273 VGGLFLAAKGHDPLAEVTNAEKAIEMMGASLLQICPVESHSPYGQRTAVVCLKERHTPRK 332
           +GGLF+AAKGHDP  EV NAE A+ ++G S+LQI PV+SHSPYGQRT VVC K+  TP+K
Sbjct: 222 IGGLFVAAKGHDPKEEVQNAENAVRLLGGSILQISPVDSHSPYGQRTTVVCRKDHSTPQK 281

Query: 333 YPRDPGTPAKAPL 345
           YPR+ GTPAK PL
Sbjct: 282 YPREAGTPAKLPL 292

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BLAST of Bhi08G001204 vs. ExPASy Swiss-Prot
Match: A8MKR7 (Ribosomal RNA small subunit methyltransferase G OS=Alkaliphilus oremlandii (strain OhILAs) OX=350688 GN=rsmG PE=3 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 2.5e-43
Identity = 100/233 (42.92%), Postives = 143/233 (61.37%), Query Frame = 0


Query: 114 LTSRQKDQVHLFVDALLQWNQKMNLTAVTEVSEVMERHVEDSLAIIPPIRNLYLSHCSTI 173
           +T  Q +Q+  + D LL+WNQKMNLTA+ E  +VM +H  DSL+    I++ YL      
Sbjct: 18  ITDAQINQLIKYKDILLEWNQKMNLTAIEEEKDVMIKHFLDSLSC---IQSKYLKR---- 77

Query: 174 SCDDIKLVDVGTGAGLPGLIIAIACPEWQVTLMESMNKRCVFLEHAVGHTGLTNVQVVRG 233
              + K++DVGTGAG PG+ + IA P  ++TL++S+ KR  FLE     T L  V  V G
Sbjct: 78  ---EGKMIDVGTGAGFPGVPLKIALPGIELTLLDSLRKRISFLEEVCAETKLGQVDFVHG 137

Query: 234 RAENLGHDLCLREKFDVVVARAVAEMRVLAEYCLPMVRVGGLFLAAKGHDPLAEVTNAEK 293
           RAE++G     REK+D  V+RAVA + VL EYCLP V+VGG F+  KG   + E+ +AEK
Sbjct: 138 RAEDIGQSKDYREKYDYAVSRAVAALNVLVEYCLPFVKVGGYFICQKGPQIIEELPDAEK 197

Query: 294 AIEMMGASLLQICPVESHSPYGQRT--AVVCLKERHTPRKYPRDPGTPAKAPL 345
           AI+++G  +++   V+   P+   T   +V  K + TP KYPR  G P+K P+
Sbjct: 198 AIKVLGGEVVEQISVD--LPFSDITHHILVIKKIKQTPSKYPRKAGKPSKEPI 238

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BLAST of Bhi08G001204 vs. ExPASy Swiss-Prot
Match: C0ZA63 (Ribosomal RNA small subunit methyltransferase G OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) OX=358681 GN=rsmG PE=3 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 3.2e-43
Identity = 95/232 (40.95%), Postives = 135/232 (58.19%), Query Frame = 0


Query: 113 TLTSRQKDQVHLFVDALLQWNQKMNLTAVTEVSEVMERHVEDSLAIIPPIRNLYLSHCST 172
           +LT RQK+Q   F   L++WN+KMNLT +TE  +V  +H  DS   I P          +
Sbjct: 16  SLTDRQKEQFDHFFRLLVEWNEKMNLTGITEEGQVYNKHFYDS---ITPAFYFPFDQVQS 75

Query: 173 ISCDDIKLVDVGTGAGLPGLIIAIACPEWQVTLMESMNKRCVFLEHAVGHTGLTNVQVVR 232
           +       VD+G GAG P + + I  P  ++T+++S+NKR  FL+H     GL NV  V 
Sbjct: 76  V-------VDIGGGAGFPSIPLKICFPHLKMTIIDSLNKRMSFLQHVAKELGLENVNPVH 135

Query: 233 GRAENLGHDLCLREKFDVVVARAVAEMRVLAEYCLPMVRVGGLFLAAKGHDPLAEVTNAE 292
           GRAE+ G +   REKFD+VVARAVA + +L+E+CLP  +VGG F+A KG +   E+  A+
Sbjct: 136 GRAEDRGQEAMYREKFDLVVARAVARLNLLSEFCLPFAKVGGHFVALKGAEITPELAEAK 195

Query: 293 KAIEMMGASLLQICPVESHSPYGQRTAVVCLKERHTPRKYPRDPGTPAKAPL 345
           KAI+ +G    ++   +     G+R  V+  K   TP+ YPR  G PAK PL
Sbjct: 196 KAIKTLGGKTRKVETFQLLEEAGERNIVIMEKIEATPKSYPRKAGVPAKKPL 237

[Close]

BLAST of Bhi08G001204 vs. ExPASy Swiss-Prot
Match: A6TXE3 (Ribosomal RNA small subunit methyltransferase G OS=Alkaliphilus metalliredigens (strain QYMF) OX=293826 GN=rsmG PE=3 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 5.5e-43
Identity = 98/233 (42.06%), Postives = 140/233 (60.09%), Query Frame = 0


Query: 114 LTSRQKDQVHLFVDALLQWNQKMNLTAVTEVSEVMERHVEDSLAIIPPIRNLYLSHCSTI 173
           +   Q  Q+  + D LL+WN+KMNLTA+TE  EVM +H  DSL+    I++ YL    T 
Sbjct: 18  IDDNQVQQLLTYKDILLEWNEKMNLTAITEEEEVMVKHFLDSLSC---IQSQYLKEEGT- 77

Query: 174 SCDDIKLVDVGTGAGLPGLIIAIACPEWQVTLMESMNKRCVFLEHAVGHTGLTNVQVVRG 233
                 ++DVGTGAG PG+ + +  P+ ++TL++S+NKR  FL+      GL +V  V G
Sbjct: 78  ------MIDVGTGAGFPGIPLKVYFPKLKLTLLDSLNKRVEFLKEVSQELGLEDVNFVHG 137

Query: 234 RAENLGHDLCLREKFDVVVARAVAEMRVLAEYCLPMVRVGGLFLAAKGHDPLAEVTNAEK 293
           RAE  G +   RE++D  VARAVA + VL EYCLP V+VGG F+  KG     E+ N++ 
Sbjct: 138 RAEECGQEETHREQYDYAVARAVASLNVLVEYCLPFVKVGGYFICQKGPQLKEEIQNSQN 197

Query: 294 AIEMMGASLLQICPVESHSPYGQRT--AVVCLKERHTPRKYPRDPGTPAKAPL 345
           AI ++G  +++    E   P+   T   +V  K + TP KYPR PGTP+K P+
Sbjct: 198 AITVLGGKVVE--QKEITLPFSDITHSLLVIEKIKQTPTKYPRKPGTPSKKPI 238

[Close]

BLAST of Bhi08G001204 vs. ExPASy Swiss-Prot
Match: A3DHY6 (Ribosomal RNA small subunit methyltransferase G OS=Hungateiclostridium thermocellum (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=rsmG PE=3 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 5.5e-43
Identity = 98/233 (42.06%), Postives = 140/233 (60.09%), Query Frame = 0


Query: 114 LTSRQKDQVHLFVDALLQWNQKMNLTAVTEVSEVMERHVEDSLAIIPPIRNLYLSHCSTI 173
           L   Q D+   + D L +WNQKMNLTA+ +  E++ +H  DS++I P I++         
Sbjct: 23  LDDEQIDKFFAYKDVLKEWNQKMNLTAIEDDEEIILKHFIDSISICPIIKD--------- 82

Query: 174 SCDDIKLVDVGTGAGLPGLIIAIACPEWQVTLMESMNKRCVFLEHAVGHTGLTNVQVVRG 233
              ++ L+DVGTGAG PG+ + I  PE +V L++S+ KR  FL   +    L ++  V  
Sbjct: 83  --KNLALIDVGTGAGFPGIPVKIVFPELKVKLLDSLEKRTKFLNEVIERLDLKDISTVHA 142

Query: 234 RAENLGHDLCLREKFDVVVARAVAEMRVLAEYCLPMVRVGGLFLAAKGHDPLAEVTNAEK 293
           RAE  G D   REK+D+ VARAVA + VL EYCLP V+VGG F+A KG+    EV N++K
Sbjct: 143 RAEEKGVDPDYREKYDISVARAVASLPVLLEYCLPFVKVGGCFIAMKGNS-TEEVENSKK 202

Query: 294 AIEMMGASLLQICPVESHSPYG--QRTAVVCLKERHTPRKYPRDPGTPAKAPL 345
           A+E++G  +  I  +E + P+   +R  +V  K R TP KYPR  G P+K PL
Sbjct: 203 ALEILGGKIEDI--LEFNLPFSDIKRNVIVIKKFRQTPTKYPRKSGKPSKNPL 241

[Close]

BLAST of Bhi08G001204 vs. ExPASy Swiss-Prot
Match: Q1WRS8 (Ribosomal RNA small subunit methyltransferase G OS=Lactobacillus salivarius (strain UCC118) OX=362948 GN=rsmG PE=3 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 8.0e-42
Identity = 92/232 (39.66%), Postives = 139/232 (59.91%), Query Frame = 0


Query: 114 LTSRQKDQVHLFVDALLQWNQKMNLTAVTEVSEVMERHVEDSLAIIPPIRNLYLSHCSTI 173
           LT  Q  Q  L+ + L++ N+ +NLTA+TE +EV  +H  DSL +   +++L        
Sbjct: 17  LTDEQMQQFELYYEFLVETNKNLNLTAITEKNEVYLKHFYDSLLLALTVKDL-------- 76

Query: 174 SCDDIKLVDVGTGAGLPGLIIAIACPEWQVTLMESMNKRCVFLEHAVGHTGLTNVQVVRG 233
             +++ L DVG GAG P L + IA P+ ++T+++S+NKR  FL+       L +V     
Sbjct: 77  QTEELSLCDVGAGAGFPSLPVKIAFPQLKITIVDSLNKRIKFLQELTQKLNLQDVHFHHA 136

Query: 234 RAENLGHDLCL-REKFDVVVARAVAEMRVLAEYCLPMVRVGGLFLAAKGHDPLAEVTNAE 293
           RAE  G    + RE++D+V ARAVA M VL+E CLP+ +VGG F+A K      E+ NA+
Sbjct: 137 RAEEFGGKRSVHRERYDLVTARAVARMSVLSELCLPLAKVGGRFIALKAQKSDEELKNAQ 196

Query: 294 KAIEMMGASLLQICPVESHSPYGQRTAVVCLKERHTPRKYPRDPGTPAKAPL 345
           KAIE++G  ++     E    + +R  +V  KE+ TP+KYPR  GTPAK+P+
Sbjct: 197 KAIEVLGGKVIADYATELPQVHDERHIIVVAKEKETPKKYPRKAGTPAKSPI 240

[Close]

BLAST of Bhi08G001204 vs. ExPASy TrEMBL
Match: A0A1S3AV93 (ribosomal RNA small subunit methyltransferase G isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483237 PE=3 SV=1)

HSP 1 Score: 540.0 bits (1390), Expect = 7.0e-150
Identity = 270/318 (84.91%), Postives = 291/318 (91.51%), Query Frame = 0


Query: 20  MGQLVGLKVGRDGRPSWQPIGRQVVKIRRRRESGCGREAKERGKMATTVSFSLRTFIKQF 79
           MGQ++G K  +    +++  GRQ  K +R     C R+ +ERGKMA+T+SFSLRTFIKQF
Sbjct: 1   MGQVIGPKDEKAQSTTYRTTGRQDTKEKR----VCRRQTEERGKMASTLSFSLRTFIKQF 60

Query: 80  SALSKPTAFNFPVRTSFKRLNVTCSTTRYLHFETLTSRQKDQVHLFVDALLQWNQKMNLT 139
           S LSK T FNFP+RTSFKRLNVTC+++R+LHFETLTSRQKDQVHLFVDALLQWNQKMNLT
Sbjct: 61  SPLSKRTRFNFPIRTSFKRLNVTCNSSRFLHFETLTSRQKDQVHLFVDALLQWNQKMNLT 120

Query: 140 AVTEVSEVMERHVEDSLAIIPPIRNLYLSHCSTISCDDIKLVDVGTGAGLPGLIIAIACP 199
           A+TEV+EVMERHVEDSLAIIPPIRNLYLSHCSTI C+DIKLVDVGTGAGLPGLIIAIACP
Sbjct: 121 AITEVNEVMERHVEDSLAIIPPIRNLYLSHCSTIPCNDIKLVDVGTGAGLPGLIIAIACP 180

Query: 200 EWQVTLMESMNKRCVFLEHAVGHTGLTNVQVVRGRAENLGHDLCLREKFDVVVARAVAEM 259
           EW VTLMESMNKRC+FLEHAVGHTGLTNVQVVRGRAENLGHDL LREKFDVVVARAVAEM
Sbjct: 181 EWHVTLMESMNKRCLFLEHAVGHTGLTNVQVVRGRAENLGHDLSLREKFDVVVARAVAEM 240

Query: 260 RVLAEYCLPMVRVGGLFLAAKGHDPLAEVTNAEKAIEMMGASLLQICPVESHSPYGQRTA 319
           R+LAEYCLPMVRVGGLFLAAKGHDPLAEVTNA KAIEMMGASLLQICPVESHSPYGQRTA
Sbjct: 241 RILAEYCLPMVRVGGLFLAAKGHDPLAEVTNAGKAIEMMGASLLQICPVESHSPYGQRTA 300

Query: 320 VVCLKERHTPRKYPRDPG 338
           VVC KERHTPRKYPRDPG
Sbjct: 301 VVCFKERHTPRKYPRDPG 314

[Close]

BLAST of Bhi08G001204 vs. ExPASy TrEMBL
Match: A0A1S3AVW1 (ribosomal RNA small subunit methyltransferase G isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483237 PE=3 SV=1)

HSP 1 Score: 540.0 bits (1390), Expect = 7.0e-150
Identity = 270/318 (84.91%), Postives = 291/318 (91.51%), Query Frame = 0


Query: 20  MGQLVGLKVGRDGRPSWQPIGRQVVKIRRRRESGCGREAKERGKMATTVSFSLRTFIKQF 79
           MGQ++G K  +    +++  GRQ  K +R     C R+ +ERGKMA+T+SFSLRTFIKQF
Sbjct: 1   MGQVIGPKDEKAQSTTYRTTGRQDTKEKR----VCRRQTEERGKMASTLSFSLRTFIKQF 60

Query: 80  SALSKPTAFNFPVRTSFKRLNVTCSTTRYLHFETLTSRQKDQVHLFVDALLQWNQKMNLT 139
           S LSK T FNFP+RTSFKRLNVTC+++R+LHFETLTSRQKDQVHLFVDALLQWNQKMNLT
Sbjct: 61  SPLSKRTRFNFPIRTSFKRLNVTCNSSRFLHFETLTSRQKDQVHLFVDALLQWNQKMNLT 120

Query: 140 AVTEVSEVMERHVEDSLAIIPPIRNLYLSHCSTISCDDIKLVDVGTGAGLPGLIIAIACP 199
           A+TEV+EVMERHVEDSLAIIPPIRNLYLSHCSTI C+DIKLVDVGTGAGLPGLIIAIACP
Sbjct: 121 AITEVNEVMERHVEDSLAIIPPIRNLYLSHCSTIPCNDIKLVDVGTGAGLPGLIIAIACP 180

Query: 200 EWQVTLMESMNKRCVFLEHAVGHTGLTNVQVVRGRAENLGHDLCLREKFDVVVARAVAEM 259
           EW VTLMESMNKRC+FLEHAVGHTGLTNVQVVRGRAENLGHDL LREKFDVVVARAVAEM
Sbjct: 181 EWHVTLMESMNKRCLFLEHAVGHTGLTNVQVVRGRAENLGHDLSLREKFDVVVARAVAEM 240

Query: 260 RVLAEYCLPMVRVGGLFLAAKGHDPLAEVTNAEKAIEMMGASLLQICPVESHSPYGQRTA 319
           R+LAEYCLPMVRVGGLFLAAKGHDPLAEVTNA KAIEMMGASLLQICPVESHSPYGQRTA
Sbjct: 241 RILAEYCLPMVRVGGLFLAAKGHDPLAEVTNAGKAIEMMGASLLQICPVESHSPYGQRTA 300

Query: 320 VVCLKERHTPRKYPRDPG 338
           VVC KERHTPRKYPRDPG
Sbjct: 301 VVCFKERHTPRKYPRDPG 314

[Close]

BLAST of Bhi08G001204 vs. ExPASy TrEMBL
Match: A0A1S3AVY0 (ribosomal RNA small subunit methyltransferase G isoform X3 OS=Cucumis melo OX=3656 GN=LOC103483237 PE=3 SV=1)

HSP 1 Score: 538.5 bits (1386), Expect = 2.0e-149
Identity = 270/319 (84.64%), Postives = 291/319 (91.22%), Query Frame = 0


Query: 20  MGQLVGLKVGRDGRPSWQPIGRQVVKIRRRRESGCGREAKERGKMATTVSFSLRTFIKQF 79
           MGQ++G K  +    +++  GRQ  K +R     C R+ +ERGKMA+T+SFSLRTFIKQF
Sbjct: 1   MGQVIGPKDEKAQSTTYRTTGRQDTKEKR----VCRRQTEERGKMASTLSFSLRTFIKQF 60

Query: 80  SALSKPTAFNFPVRTSFKRLNVTCSTTRYLHFETLTSRQKDQVHLFVDALLQWNQKMNLT 139
           S LSK T FNFP+RTSFKRLNVTC+++R+LHFETLTSRQKDQVHLFVDALLQWNQKMNLT
Sbjct: 61  SPLSKRTRFNFPIRTSFKRLNVTCNSSRFLHFETLTSRQKDQVHLFVDALLQWNQKMNLT 120

Query: 140 AVTEVSEVMERHVEDSLAIIPPIRNLYLSHCSTISCDDIKLVDVGTGAGLPGLIIAIACP 199
           A+TEV+EVMERHVEDSLAIIPPIRNLYLSHCSTI C+DIKLVDVGTGAGLPGLIIAIACP
Sbjct: 121 AITEVNEVMERHVEDSLAIIPPIRNLYLSHCSTIPCNDIKLVDVGTGAGLPGLIIAIACP 180

Query: 200 EWQVTLMESMNKRCVFLEHAVGHTGLTNVQVVRGRAENLGHDLCLREKFDVVVARAVAEM 259
           EW VTLMESMNKRC+FLEHAVGHTGLTNVQVVRGRAENLGHDL LREKFDVVVARAVAEM
Sbjct: 181 EWHVTLMESMNKRCLFLEHAVGHTGLTNVQVVRGRAENLGHDLSLREKFDVVVARAVAEM 240

Query: 260 RVLAEYCLPMVRVGGLFLAAKGHDPLAEVTNAEKAIEMMGASLLQICPVESHSPYGQRTA 319
           R+LAEYCLPMVRVGGLFLAAKGHDPLAEVTNA KAIEMMGASLLQICPVESHSPYGQRTA
Sbjct: 241 RILAEYCLPMVRVGGLFLAAKGHDPLAEVTNAGKAIEMMGASLLQICPVESHSPYGQRTA 300

Query: 320 VVCLKERHTPRKYPRDPGT 339
           VVC KERHTPRKYPRDP T
Sbjct: 301 VVCFKERHTPRKYPRDPVT 315

[Close]

BLAST of Bhi08G001204 vs. ExPASy TrEMBL
Match: A0A5A7UNI8 (Ribosomal RNA small subunit methyltransferase G isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G00460 PE=3 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 2.5e-147
Identity = 261/281 (92.88%), Postives = 272/281 (96.80%), Query Frame = 0


Query: 64  MATTVSFSLRTFIKQFSALSKPTAFNFPVRTSFKRLNVTCSTTRYLHFETLTSRQKDQVH 123
           MA+T+SFSLRTFIKQFS LSK T FNFP+RTSFKRLNVTC+++R+LHFETLTSRQKDQVH
Sbjct: 1   MASTLSFSLRTFIKQFSPLSKRTRFNFPIRTSFKRLNVTCNSSRFLHFETLTSRQKDQVH 60

Query: 124 LFVDALLQWNQKMNLTAVTEVSEVMERHVEDSLAIIPPIRNLYLSHCSTISCDDIKLVDV 183
           LFVDALLQWNQKMNLTA+TEV+EVMERHVEDSLAIIPPIRNLYLSHCSTI CDDIKLVDV
Sbjct: 61  LFVDALLQWNQKMNLTAITEVNEVMERHVEDSLAIIPPIRNLYLSHCSTIPCDDIKLVDV 120

Query: 184 GTGAGLPGLIIAIACPEWQVTLMESMNKRCVFLEHAVGHTGLTNVQVVRGRAENLGHDLC 243
           GTGAGLPGLIIAIACPEW VTLMESMNKRC+FLEHAVGHTGLTNVQVVRGRAENLGHDL 
Sbjct: 121 GTGAGLPGLIIAIACPEWHVTLMESMNKRCLFLEHAVGHTGLTNVQVVRGRAENLGHDLS 180

Query: 244 LREKFDVVVARAVAEMRVLAEYCLPMVRVGGLFLAAKGHDPLAEVTNAEKAIEMMGASLL 303
           LREKFDVVVARAVAEMR+LAEYCLPMVRVGGLFLAAKGHDPLAEVTNA KAIEMMGASLL
Sbjct: 181 LREKFDVVVARAVAEMRILAEYCLPMVRVGGLFLAAKGHDPLAEVTNAGKAIEMMGASLL 240

Query: 304 QICPVESHSPYGQRTAVVCLKERHTPRKYPRDPGTPAKAPL 345
           QICPVESHSPYGQRTAVVC KERHTPRKYPRDPGTPAK PL
Sbjct: 241 QICPVESHSPYGQRTAVVCFKERHTPRKYPRDPGTPAKTPL 281

[Close]

BLAST of Bhi08G001204 vs. ExPASy TrEMBL
Match: A0A5D3BLB2 (Ribosomal RNA small subunit methyltransferase G isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G003410 PE=3 SV=1)

HSP 1 Score: 531.2 bits (1367), Expect = 3.3e-147
Identity = 261/281 (92.88%), Postives = 273/281 (97.15%), Query Frame = 0


Query: 64  MATTVSFSLRTFIKQFSALSKPTAFNFPVRTSFKRLNVTCSTTRYLHFETLTSRQKDQVH 123
           MA+T+SFSLRTFIKQFS LSK T FNFP+RTSFKRLNVTC+++R+LHFETLTSRQKDQVH
Sbjct: 1   MASTLSFSLRTFIKQFSPLSKRTRFNFPIRTSFKRLNVTCNSSRFLHFETLTSRQKDQVH 60

Query: 124 LFVDALLQWNQKMNLTAVTEVSEVMERHVEDSLAIIPPIRNLYLSHCSTISCDDIKLVDV 183
           LFVDALLQWNQKMNLTA+TEV+EVMERHVEDSLAIIPPIRNLYLSHCSTI C+DIKLVDV
Sbjct: 61  LFVDALLQWNQKMNLTAITEVNEVMERHVEDSLAIIPPIRNLYLSHCSTIPCNDIKLVDV 120

Query: 184 GTGAGLPGLIIAIACPEWQVTLMESMNKRCVFLEHAVGHTGLTNVQVVRGRAENLGHDLC 243
           GTGAGLPGLIIAIACPEW VTLMESMNKRC+FLEHAVGHTGLTNVQVVRGRAENLGHDL 
Sbjct: 121 GTGAGLPGLIIAIACPEWHVTLMESMNKRCLFLEHAVGHTGLTNVQVVRGRAENLGHDLS 180

Query: 244 LREKFDVVVARAVAEMRVLAEYCLPMVRVGGLFLAAKGHDPLAEVTNAEKAIEMMGASLL 303
           LREKFDVVVARAVAEMR+LAEYCLPMVRVGGLFLAAKGHDPLAEVTNA KAIEMMGASLL
Sbjct: 181 LREKFDVVVARAVAEMRILAEYCLPMVRVGGLFLAAKGHDPLAEVTNAGKAIEMMGASLL 240

Query: 304 QICPVESHSPYGQRTAVVCLKERHTPRKYPRDPGTPAKAPL 345
           QICPVESHSPYGQRTAVVC KERHTPRKYPRDPGTPAKAPL
Sbjct: 241 QICPVESHSPYGQRTAVVCFKERHTPRKYPRDPGTPAKAPL 281

The following BLAST results are available for this feature:

BLAST of Bhi08G001204 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G50110.1	3.1e-97	68.38	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	[more]

BLAST of Bhi08G001204 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A8MKR7	2.5e-43	42.92	Ribosomal RNA small subunit methyltransferase G OS=Alkaliphilus oremlandii (stra...	[more]
C0ZA63	3.2e-43	40.95	Ribosomal RNA small subunit methyltransferase G OS=Brevibacillus brevis (strain ...	[more]
A6TXE3	5.5e-43	42.06	Ribosomal RNA small subunit methyltransferase G OS=Alkaliphilus metalliredigens ...	[more]
A3DHY6	5.5e-43	42.06	Ribosomal RNA small subunit methyltransferase G OS=Hungateiclostridium thermocel...	[more]
Q1WRS8	8.0e-42	39.66	Ribosomal RNA small subunit methyltransferase G OS=Lactobacillus salivarius (str...	[more]

BLAST of Bhi08G001204 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AV93	7.0e-150	84.91	ribosomal RNA small subunit methyltransferase G isoform X1 OS=Cucumis melo OX=36...	[more]
A0A1S3AVW1	7.0e-150	84.91	ribosomal RNA small subunit methyltransferase G isoform X2 OS=Cucumis melo OX=36...	[more]
A0A1S3AVY0	2.0e-149	84.64	ribosomal RNA small subunit methyltransferase G isoform X3 OS=Cucumis melo OX=36...	[more]
A0A5A7UNI8	2.5e-147	92.88	Ribosomal RNA small subunit methyltransferase G isoform X2 OS=Cucumis melo var. ...	[more]
A0A5D3BLB2	3.3e-147	92.88	Ribosomal RNA small subunit methyltransferase G isoform X2 OS=Cucumis melo var. ...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.150	Vaccinia Virus protein VP39	coord: 99..344 e-value: 8.9E-83 score: 279.2
None	No IPR available	CDD	cd02440	AdoMet_MTases	coord: 179..277 e-value: 7.80507E-5 score: 39.3355
IPR003682	rRNA small subunit methyltransferase G	TIGRFAM	TIGR00138	TIGR00138	coord: 124..316 e-value: 4.5E-46 score: 154.8
IPR003682	rRNA small subunit methyltransferase G	PFAM	PF02527	GidB	coord: 119..305 e-value: 1.3E-48 score: 164.8
IPR003682	rRNA small subunit methyltransferase G	PANTHER	PTHR31760	S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN	coord: 66..344
IPR003682	rRNA small subunit methyltransferase G	HAMAP	MF_00074	16SrRNA_methyltr_G	coord: 111..321 score: 26.683296
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 108..343

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi08M001204	Bhi08M001204	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031167	rRNA methylation
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0008649	rRNA methyltransferase activity