Bhi08G001062 (gene) Wax gourd (B227) v1

Overview


Name	Bhi08G001062
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	pre-mRNA-splicing factor SPF27 homolog
Location	chr8: 39169331 .. 39173126 (-)
RNA-Seq Expression	Bhi08G001062
Synteny	Bhi08G001062

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATAAAAATACATAAAGTTGAAATGAAACAAAGAAAATCCAATCAATTTGCGAAGCGGGCCGCGGAATCTCCATCTCCTCGCACTTGACCTTCTGTAAGACTGAAACTCGAAACCTCTGTTGTTCGTCGCGGTGGCAATGGCGACTAACAACATTAATGGGGATATCCTAATGCTCGAAGCTCCACCGCAGCCGTCTCAACCAGCGTGGCGCGTTGCTGCGGATGCCGAGGTAGTCGACGCCCTGCCCTACATCGACGACGACTATGCAGACCCAAGGGTCAAAGCAGAGGTCGACCGCTTAGTCGAGGAAGAGATGCGCCGTAGCTCCAAACGACCGGCCGACTTTCTCAAAGACTTGCCTCCCGTTCCTAAGTTCAAGTTCGAAGTAAGTTACGCTGCAATTTCATTTCCCACCGGAGTTTCCTCTAGGTTTTGCACTTATAGTTCCGCTTGATTTCAGAGTTATTATGCCTAAAAAAACAAATTACTTTTCTCCGCTGGATATATTTGCTAGACACGTACTAATTGCCGAGTTTGGAAGTGTTTAGAAGCTCCATCTGCTGGTTCTGTTTTCGTTTACTCGAAAACGAGCTAAAGAAATTCGAATAAAAATTAATCGATTGACAAGAACACAGATATTGCCATATTGCTTATCCGCAACTCCCACTGTGTCATCCAATGTCTATAGGACGCGCCGCTCTACATAAATTCTCTAACCATTACATATGATAGATCTTGAGAATATTACAAAATGTGGTAATATTAGTGATAGTCTATTCAACTGACGAAGTTTGAATTCAGGATCATCCAATGCTTGCTAGAGAGTACGAACGTGTAAGAGCTGGGAGACCTCCAGTGCCTCTCGATGTTGCAAGATATAAGTTAGAGACACCACCTCCAAATAAAAAAAATGACGAAACTGCTTGGAAGCAGACACTTCAGAAAGCTCAATGCTTACTCCGTCATCAAGTACTGAGGTGAAGTGTTAATACGTTTCTATTGTTCTAGGAATTTAAGACTTGTCTTTTGGAAAACTTAATTTTATGGAGAACAGGTAGAGTTGGCTACTTCAACTCATACAGGTCTTCTAATATCTGCAATACTGAGTTAGTATTTTCACGGATGCTCTTAATTTATTAATTTTATGGTCTATATTTAGCTGAAAACTCCGTTGACATAGATCACTTTAAATACTTTATGTTACTTGACCCTAAAACTCACCTTCTTCATATAGCTCTTTCCCATTCGTCATATTTCTATCCCTTTTCTAGGTTGCAGTTGCTTTCTTATATCTAGTTTCTGTACCTATGGGCCATGCTTATGAGAGGTGTGGTGTGATTTATACAATTTTGGTAAGGAAAAAACAAAATACTGAAGATTATGCACCCTACCATGAAAACAAACATTAGAGAGGTTTTGATGATTCATTAGGAGATAATAAGAATATGACAACCTAACTACTGGTGGTGGTGCTTTTGTGTCATACTGCAGGCTGGAAAATTTGGATCTGATGTCAAAATATGGCCCTGATATATGGAAGCAACACAACAAACAGTTGGAAGCACTTCTATCAAGGTTTGTTAATATATTTTGTTTTGATGTTCTATATTTTCTGTGTACTAATTATGTTTTTATTTTATCAACAGTTCCTAGTCAAATCCTTTTCTTTATAACTTTATATAGTGTAAATTGTCCCGTTACTTGCAAGAAAAAATAATTTCAAATGGAAAATAGTTATTTTACACTGAGTTTTTGTATCTCTCTTTCTATCACATACTGCTGGTTGGTTTTATTTTTATTTTTATTTTCATCATTAATCGTCTTTATAATTAATACCCGAACTTTCATTGAGAAAAAATGAAAGAATACGAGGACATTAAAAAAAAAAAATGAAGTTATGCAGTATCTTGTTGCCATTGGTGCAGACACGAACCATGTAAAGTTGGTCCTGCCTATGGCTCTTTCTTTCATGAATTTAGGCTTGCATCCATGCTTGAAGACTAGGCTTCAATATTTGAGTAGGGTTAGCACTTCACATCGGTAATCGTTAACTGATGAAATGAATAAAGACTGGTGAAACAAATTTTATGATTTTGTGCATTGTTGACAATCCATTGGTGGTTTCTATTTTTCTTTCTATTCATGCCAACCAATCTATGTACAGATTGGGATAGGTTTTAATCTACGGTGGTTGCAAAGATCTACTTGCAGACTAAGAATTGATCCTGTTAAATGTATAAAACAAGATACACAAGAACTTAATGTTTGGACCTTCATGGTATAACGACAATAGGATTCTGCGTTTGCATATTATCCATGGTAGATTCAAACATTCACTTGCATGGTCATATTATCTGAGCCAGGACTGTTGCTATGCAAACTGAAAACTATTGCATCACAGGCATTGGTTTTATGGAACACTTGGCCACATTTTATCTGTCATTTCTGAGAGAAGTGAACATGAATGTACTCGGTACATCTGCGATCTGACCAAAGTGATCTTATATAATTGTTACTTATATTGTCATGATGTTAATTGTTATCAGAATGCAAAAATTAGCTCAAGAACAGAATGAGAAGATTGAAAAGGTGAACCGTGAAAGGAAATTCCATCAAGTAAGTAACATCCCTGTAATTCATATTACAATAGGGCAGAGGTCAATTCTTTGAATATTTGGTTGATTTTTTGTGCAATGATCAGCAAAACGCTGCATATGAGCTTCATGCTTTGTCCACGCAATGGAAGGAGCTTTGTGAGAAAAATATGGAAATCCAAGTGGCATGCTTTCAATTAGAGGGTCAAATCGAGGAACTAAGGAGAGAGGCAACAGAAAAGTAGTATTGTCTTTTCTATTTGATCTATTTTCGTGCTTCGTGTGTTGTCATATTTACAACTGATCTGTGGTTTACGATTCCAGAGGCTGGAATTTGGAAGTCAATGTAGAGAATGGTTCTGTTTCGCTTCCCGTATCATAAGGTATGCGTTAGATGCCATCTTTTATTTTTGATATCCAATGTTTAACTCATAATTTACTTCCATTTCCCTCGTATATTAGAATTTCTAACTTAACACTACTCGTACCATGTTTTGTTTTTTGTTTCTTTTCAATATCTTGTGTTAAAAGGATATGTCATCTCCGGTCACCTACTTTAGGTCCTGTCTACGAATATCACATGTTACTGTTTTATGATATAAACCGTATGTGTGCATCCGTCTTCGAGTCAATTTTGATTTTTAGCAATCTCATGGCCTGAACTGAAATGAATTCTACTCTACCATTAATATGCTCATGCCATGAGATTGCAGAAAATACAATAATTCAGTCTAACTTTCTCAAGTTGGTATGAGAAAGCTCAGTTTAGTGATGGCAGAAAATTTAAGCTTCACAATATTGTATCAGATTAATTATACTGGTAGATTATGACATGATTTTTTATCATCTCAATGGAAAAGGGGAGCGTCACTTCCAACGTCATTTGATGCTATTATGAGATGCCTTACATGGAAGATGAGTTAGATTTCTGCTTATATGGGAGAGGATGGTTGCTCCAAAGTTTGTCTTTAGTCATTTTCAAATTTTGCATTGAATTGATCGTATCTGTACCTTTAGTGAAGTAATTCGAAGTACACTTGCTTCCTCTAACCGTGTTATTTTGGTGACTCTCTGACTTGAATATAGTTTATAACTTTATAATGTACAAATTATTGAACTACCAGACTATCTATCAAATGTATAACAATTGATATTAGTTCTTAATTCTTTCGAAATAAACCGAGGTAGGATTGATTGACTA

mRNA sequence

AATAAAAATACATAAAGTTGAAATGAAACAAAGAAAATCCAATCAATTTGCGAAGCGGGCCGCGGAATCTCCATCTCCTCGCACTTGACCTTCTGTAAGACTGAAACTCGAAACCTCTGTTGTTCGTCGCGGTGGCAATGGCGACTAACAACATTAATGGGGATATCCTAATGCTCGAAGCTCCACCGCAGCCGTCTCAACCAGCGTGGCGCGTTGCTGCGGATGCCGAGGTAGTCGACGCCCTGCCCTACATCGACGACGACTATGCAGACCCAAGGGTCAAAGCAGAGGTCGACCGCTTAGTCGAGGAAGAGATGCGCCGTAGCTCCAAACGACCGGCCGACTTTCTCAAAGACTTGCCTCCCGTTCCTAAGTTCAAGTTCGAAGATCATCCAATGCTTGCTAGAGAGTACGAACGTGTAAGAGCTGGGAGACCTCCAGTGCCTCTCGATGTTGCAAGATATAAGTTAGAGACACCACCTCCAAATAAAAAAAATGACGAAACTGCTTGGAAGCAGACACTTCAGAAAGCTCAATGCTTACTCCGTCATCAAGTACTGAGGCTGGAAAATTTGGATCTGATGTCAAAATATGGCCCTGATATATGGAAGCAACACAACAAACAGTTGGAAGCACTTCTATCAAGAATGCAAAAATTAGCTCAAGAACAGAATGAGAAGATTGAAAAGGTGAACCGTGAAAGGAAATTCCATCAACAAAACGCTGCATATGAGCTTCATGCTTTGTCCACGCAATGGAAGGAGCTTTGTGAGAAAAATATGGAAATCCAAGTGGCATGCTTTCAATTAGAGGGTCAAATCGAGGAACTAAGGAGAGAGGCAACAGAAAAAGGCTGGAATTTGGAAGTCAATGTAGAGAATGGTTCTGTTTCGCTTCCCGTATCATAAGGGGAGCGTCACTTCCAACGTCATTTGATGCTATTATGAGATGCCTTACATGGAAGATGAGTTAGATTTCTGCTTATATGGGAGAGGATGGTTGCTCCAAAGTTTGTCTTTAGTCATTTTCAAATTTTGCATTGAATTGATCGTATCTGTACCTTTAGTGAAGTAATTCGAAGTACACTTGCTTCCTCTAACCGTGTTATTTTGGTGACTCTCTGACTTGAATATAGTTTATAACTTTATAATGTACAAATTATTGAACTACCAGACTATCTATCAAATGTATAACAATTGATATTAGTTCTTAATTCTTTCGAAATAAACCGAGGTAGGATTGATTGACTA

Coding sequence (CDS)

ATGGCGACTAACAACATTAATGGGGATATCCTAATGCTCGAAGCTCCACCGCAGCCGTCTCAACCAGCGTGGCGCGTTGCTGCGGATGCCGAGGTAGTCGACGCCCTGCCCTACATCGACGACGACTATGCAGACCCAAGGGTCAAAGCAGAGGTCGACCGCTTAGTCGAGGAAGAGATGCGCCGTAGCTCCAAACGACCGGCCGACTTTCTCAAAGACTTGCCTCCCGTTCCTAAGTTCAAGTTCGAAGATCATCCAATGCTTGCTAGAGAGTACGAACGTGTAAGAGCTGGGAGACCTCCAGTGCCTCTCGATGTTGCAAGATATAAGTTAGAGACACCACCTCCAAATAAAAAAAATGACGAAACTGCTTGGAAGCAGACACTTCAGAAAGCTCAATGCTTACTCCGTCATCAAGTACTGAGGCTGGAAAATTTGGATCTGATGTCAAAATATGGCCCTGATATATGGAAGCAACACAACAAACAGTTGGAAGCACTTCTATCAAGAATGCAAAAATTAGCTCAAGAACAGAATGAGAAGATTGAAAAGGTGAACCGTGAAAGGAAATTCCATCAACAAAACGCTGCATATGAGCTTCATGCTTTGTCCACGCAATGGAAGGAGCTTTGTGAGAAAAATATGGAAATCCAAGTGGCATGCTTTCAATTAGAGGGTCAAATCGAGGAACTAAGGAGAGAGGCAACAGAAAAAGGCTGGAATTTGGAAGTCAATGTAGAGAATGGTTCTGTTTCGCTTCCCGTATCATAA

Protein sequence

MATNNINGDILMLEAPPQPSQPAWRVAADAEVVDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPVPKFKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIEELRREATEKGWNLEVNVENGSVSLPVS

Homology

[Close]

BLAST of Bhi08G001062 vs. TAIR 10
Match: AT3G18165.1 (modifier of snc1,4 )

HSP 1 Score: 330.5 bits (846), Expect = 1.2e-90
Identity = 164/249 (65.86%), Postives = 208/249 (83.53%), Query Frame = 0


Query: 1   MATNNINGDILMLEAPPQPSQPAWRVAADAEVVDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MATN  NGD+LMLEA P+ ++P W  AA+AEV+DALPYIDDDY +P +K+EVDRLVEEEM
Sbjct: 1   MATN--NGDVLMLEATPEAARP-WASAANAEVIDALPYIDDDYGNPLIKSEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPVPKFKFEDHPMLAREYERVRAGRPPVPLDV-ARYKLETPPPNKK 120
           RRSSK+PADFLKDLPP+PKF F++ P+L +EYERVRAG+PPV +D  +RYKLE PP NK+
Sbjct: 61  RRSSKKPADFLKDLPPLPKFDFKNCPVLGKEYERVRAGKPPVRIDFESRYKLEMPPANKR 120

Query: 121 NDETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQN 180
           ND+ AWKQ LQK Q  L+ +++ LENL+LMSK GP++W+Q+N +LE  L+RMQ+LAQEQN
Sbjct: 121 NDDAAWKQYLQKNQRSLQQKLIELENLELMSKLGPELWRQNNHRLEVFLTRMQRLAQEQN 180

Query: 181 EKIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIEELRREATEKG 240
           E+IEKVNRERK+HQQ  +YEL+ALS +W++LC KNMEIQ AC  LE QI+  ++EA E+G
Sbjct: 181 EEIEKVNRERKYHQQTTSYELNALSQEWRQLCVKNMEIQSACAMLETQIDSFKKEAAERG 240

Query: 241 WNLEVNVEN 249
           WNLE  +EN
Sbjct: 241 WNLEEKLEN 246

[Close]

BLAST of Bhi08G001062 vs. ExPASy Swiss-Prot
Match: Q949S9 (Pre-mRNA-splicing factor SPF27 homolog OS=Arabidopsis thaliana OX=3702 GN=MOS4 PE=1 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 1.7e-89
Identity = 164/249 (65.86%), Postives = 208/249 (83.53%), Query Frame = 0


Query: 1   MATNNINGDILMLEAPPQPSQPAWRVAADAEVVDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MATN  NGD+LMLEA P+ ++P W  AA+AEV+DALPYIDDDY +P +K+EVDRLVEEEM
Sbjct: 1   MATN--NGDVLMLEATPEAARP-WASAANAEVIDALPYIDDDYGNPLIKSEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPVPKFKFEDHPMLAREYERVRAGRPPVPLDV-ARYKLETPPPNKK 120
           RRSSK+PADFLKDLPP+PKF F++ P+L +EYERVRAG+PPV +D  +RYKLE PP NK+
Sbjct: 61  RRSSKKPADFLKDLPPLPKFDFKNCPVLGKEYERVRAGKPPVRIDFESRYKLEMPPANKR 120

Query: 121 NDETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQN 180
           ND+ AWKQ LQK Q  L+ +++ LENL+LMSK GP++W+Q+N +LE  L+RMQ+LAQEQN
Sbjct: 121 NDDAAWKQYLQKNQRSLQQKLIELENLELMSKLGPELWRQNNHRLEVFLTRMQRLAQEQN 180

Query: 181 EKIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIEELRREATEKG 240
           E+IEKVNRERK+HQQ  +YEL+ALS +W++LC KNMEIQ AC  LE QI+  ++EA E+G
Sbjct: 181 EEIEKVNRERKYHQQTTSYELNALSQEWRQLCVKNMEIQSACAMLETQIDSFKKEAAERG 240

Query: 241 WNLEVNVEN 249
           WNLE  +EN
Sbjct: 241 WNLEEKLEN 246

[Close]

BLAST of Bhi08G001062 vs. ExPASy Swiss-Prot
Match: Q6PBE2 (Pre-mRNA-splicing factor SPF27 OS=Xenopus tropicalis OX=8364 GN=bcas2 PE=2 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 3.2e-27
Identity = 77/218 (35.32%), Postives = 119/218 (54.59%), Query Frame = 0


Query: 26  VAADAEVVDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPVPKFKFEDH 85
           VA D  VVDALPY D  Y    V+     LVEEE RR   RP        P P +   + 
Sbjct: 7   VAGDV-VVDALPYFDQGYDAQGVREAAAALVEEETRR--YRPTKNYLSYLPTPDYSAFET 66

Query: 86  PMLAREYERVRAGRPPVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLEN 145
            ++  E+ER+ + +P   L + RY+L  P   ++ND TAW++ +  +   L HQ +R+EN
Sbjct: 67  EIMRNEFERLSSRQPLELLSMKRYELPAPLSGQRNDITAWQECVNNSMAQLEHQAVRIEN 126

Query: 146 LDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALST 205
           L+LMS++G + WK +N+ L  ++   QK  Q+  +KI+ +N +RK  Q  A   L  + +
Sbjct: 127 LELMSQHGCNAWKVYNENLLHMIDCAQKDLQKLRKKIQDLNWQRKNSQLTAGARLREMES 186

Query: 206 QWKELCEKNMEIQVACFQLEGQIEELRREATEKGWNLE 244
            W  L  KN EI+ A  Q+E ++ +L+  + E   N+E
Sbjct: 187 TWVSLVSKNYEIERAIVQMENEVYQLKERSGENKENIE 221

[Close]

BLAST of Bhi08G001062 vs. ExPASy Swiss-Prot
Match: Q5RKQ0 (Pre-mRNA-splicing factor SPF27 OS=Danio rerio OX=7955 GN=bcas2 PE=2 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 4.1e-27
Identity = 75/209 (35.89%), Postives = 111/209 (53.11%), Query Frame = 0


Query: 26  VAADAEVVDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPVPKFKFEDH 85
           VA D   VDALPY D  Y    V+     LVEEE RR   RP        P P F   + 
Sbjct: 7   VAGDV-FVDALPYFDQGYDATGVREAAAALVEEETRR--YRPTKNYLSYLPTPDFSAFET 66

Query: 86  PMLAREYERVRAGRPPVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLEN 145
            ++  E+ER+ A +P   L + RY+L  P   +KND TAW+  +  +   L HQ +R+EN
Sbjct: 67  EIMRNEFERLAARQPMELLSMKRYELPAPSSGQKNDMTAWQDCVNNSMAQLEHQAVRIEN 126

Query: 146 LDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALST 205
           L+LM++YG + WK  N  L  ++   QK  Q   ++I+ +N +RK  Q     +L  L +
Sbjct: 127 LELMAQYGTNAWKMSNDNLALMIENSQKELQNVRKEIQDLNWQRKNDQLAGGAKLRELES 186

Query: 206 QWKELCEKNMEIQVACFQLEGQIEELRRE 235
            W  L  KN EI+ A  QLE ++ +++++
Sbjct: 187 NWVSLVSKNYEIERAIVQLENEVAQMKQQ 212

[Close]

BLAST of Bhi08G001062 vs. ExPASy Swiss-Prot
Match: O75934 (Pre-mRNA-splicing factor SPF27 OS=Homo sapiens OX=9606 GN=BCAS2 PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 7.0e-27
Identity = 74/212 (34.91%), Postives = 115/212 (54.25%), Query Frame = 0


Query: 26  VAADAEVVDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPVPKFKFEDH 85
           + A   VVDALPY D  Y  P V+     LVEEE RR   RP          P +   + 
Sbjct: 6   LVAGEVVVDALPYFDQGYEAPGVREAAAALVEEETRR--YRPTKNYLSYLTAPDYSAFET 65

Query: 86  PMLAREYERVRAGRPPVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLEN 145
            ++  E+ER+ A +P   L + RY+L  P   +KND TAW++ +  +   L HQ +R+EN
Sbjct: 66  DIMRNEFERLAARQPIELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVRIEN 125

Query: 146 LDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALST 205
           L+LMS++G + WK +N+ L  ++   QK  Q+  + I+ +N +RK  Q  A  +L  + +
Sbjct: 126 LELMSQHGCNAWKVYNENLVHMIEHAQKELQKLRKHIQDLNWQRKNMQLTAGSKLREMES 185

Query: 206 QWKELCEKNMEIQVACFQLEGQIEELRREATE 238
            W  L  KN EI+    QLE +I +++++  E
Sbjct: 186 NWVSLVSKNYEIERTIVQLENEIYQIKQQHGE 215

[Close]

BLAST of Bhi08G001062 vs. ExPASy Swiss-Prot
Match: Q9D287 (Pre-mRNA-splicing factor SPF27 OS=Mus musculus OX=10090 GN=Bcas2 PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 7.0e-27
Identity = 74/212 (34.91%), Postives = 115/212 (54.25%), Query Frame = 0


Query: 26  VAADAEVVDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPVPKFKFEDH 85
           + A   VVDALPY D  Y  P V+     LVEEE RR   RP          P +   + 
Sbjct: 6   LVAGEVVVDALPYFDQGYEAPGVREAAAALVEEETRR--YRPTKNYLSYLTAPDYSAFET 65

Query: 86  PMLAREYERVRAGRPPVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLEN 145
            ++  E+ER+ A +P   L + RY+L  P   +KND TAW++ +  +   L HQ +R+EN
Sbjct: 66  DIMRNEFERLAARQPIELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVRIEN 125

Query: 146 LDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALST 205
           L+LMS++G + WK +N+ L  ++   QK  Q+  + I+ +N +RK  Q  A  +L  + +
Sbjct: 126 LELMSQHGCNAWKVYNENLVHMIEHAQKELQKLRKHIQDLNWQRKNMQLTAGSKLREMES 185

Query: 206 QWKELCEKNMEIQVACFQLEGQIEELRREATE 238
            W  L  KN EI+    QLE +I +++++  E
Sbjct: 186 NWVSLVSKNYEIERTIVQLENEIYQIKQQHGE 215

[Close]

BLAST of Bhi08G001062 vs. ExPASy TrEMBL
Match: A0A0A0LQG2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042680 PE=4 SV=1)

HSP 1 Score: 501.5 bits (1290), Expect = 2.1e-138
Identity = 249/256 (97.27%), Postives = 253/256 (98.83%), Query Frame = 0


Query: 1   MATNNINGDILMLEAPPQPSQPAWRVAADAEVVDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MA NN NGDILMLEAPPQPSQPAWRV+ADAEV+DALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPVPKFKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120
           RRSSKRPADFLKDLPP+PKFKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIEELRREATEKGW 240
           KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQI+ELRREA EKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW 240

Query: 241 NLEVNVENGSVSLPVS 257
           NLEVNVENGSVSLPVS
Sbjct: 241 NLEVNVENGSVSLPVS 256

[Close]

BLAST of Bhi08G001062 vs. ExPASy TrEMBL
Match: A0A1S3CHH7 (pre-mRNA-splicing factor SPF27 homolog OS=Cucumis melo OX=3656 GN=LOC103500959 PE=4 SV=1)

HSP 1 Score: 499.2 bits (1284), Expect = 1.0e-137
Identity = 248/256 (96.88%), Postives = 252/256 (98.44%), Query Frame = 0


Query: 1   MATNNINGDILMLEAPPQPSQPAWRVAADAEVVDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MA NN NGDILMLEAPPQPSQPAWRV+ADAEV+DALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPVPKFKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120
           RRSSKRPADFLKDLPP+PK KFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIEELRREATEKGW 240
           KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQI+ELRREA EKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW 240

Query: 241 NLEVNVENGSVSLPVS 257
           NLEVNVENGSVSLPVS
Sbjct: 241 NLEVNVENGSVSLPVS 256

[Close]

BLAST of Bhi08G001062 vs. ExPASy TrEMBL
Match: A0A6J1EDE4 (pre-mRNA-splicing factor SPF27 homolog OS=Cucurbita moschata OX=3662 GN=LOC111431514 PE=4 SV=1)

HSP 1 Score: 483.8 bits (1244), Expect = 4.4e-133
Identity = 239/256 (93.36%), Postives = 249/256 (97.27%), Query Frame = 0


Query: 1   MATNNINGDILMLEAPPQPSQPAWRVAADAEVVDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MA NN +GDILMLEAPPQPSQPAWRV+ADAEV+DALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MAINNNSGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPVPKFKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120
           RRSSKRPADFLKDLPP+PKFKFEDHPMLAREYERVRAGRPP+PLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQ+AQCLL+HQVLRLENL+LMSKY PDIWKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQRAQCLLQHQVLRLENLELMSKYAPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIEELRREATEKGW 240
           KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVAC Q+EGQI+ELR EA EKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGW 240

Query: 241 NLEVNVENGSVSLPVS 257
           NLEVNVENGSVS PVS
Sbjct: 241 NLEVNVENGSVSFPVS 256

[Close]

BLAST of Bhi08G001062 vs. ExPASy TrEMBL
Match: A0A6J1CB04 (pre-mRNA-splicing factor SPF27 homolog OS=Momordica charantia OX=3673 GN=LOC111009059 PE=4 SV=1)

HSP 1 Score: 480.7 bits (1236), Expect = 3.8e-132
Identity = 237/256 (92.58%), Postives = 246/256 (96.09%), Query Frame = 0


Query: 1   MATNNINGDILMLEAPPQPSQPAWRVAADAEVVDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MATN+ NGDILMLEAPPQPSQP W VAADAEV+DALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MATNSNNGDILMLEAPPQPSQPTWHVAADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPVPKFKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120
           RRS KRPADFLKDLPPVPK KFEDHP+LAREYERVRAGRPPVPLDVARYKLETPPPNKKN
Sbjct: 61  RRSFKRPADFLKDLPPVPKVKFEDHPLLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQ+AQCLLRHQVLRLENL+LMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQRAQCLLRHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIEELRREATEKGW 240
           KIEKVNRERKFHQQNAAYELHALSTQWK+LC KNMEIQVAC Q+EGQI+ELRREA E GW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKDLCHKNMEIQVACSQIEGQIQELRREAAENGW 240

Query: 241 NLEVNVENGSVSLPVS 257
           NLE N+ENGSVSLPVS
Sbjct: 241 NLEANIENGSVSLPVS 256

[Close]

BLAST of Bhi08G001062 vs. ExPASy TrEMBL
Match: A0A6J1KLZ4 (pre-mRNA-splicing factor SPF27 homolog OS=Cucurbita maxima OX=3661 GN=LOC111495390 PE=4 SV=1)

HSP 1 Score: 480.3 bits (1235), Expect = 4.9e-132
Identity = 238/256 (92.97%), Postives = 248/256 (96.88%), Query Frame = 0


Query: 1   MATNNINGDILMLEAPPQPSQPAWRVAADAEVVDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MA NN +GDILMLEAPP PSQPAWRV+ADAEV+DALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MAINNNSGDILMLEAPPLPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPVPKFKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120
           RRSSKRPADFLKDLPP+PKFKFEDHPMLAREYERVRAGRPP+PLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQ+AQCLL+HQVLRLENL+LMSKYG DIWKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQRAQCLLQHQVLRLENLELMSKYGSDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIEELRREATEKGW 240
           KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVAC Q+EGQI+ELR EA EKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGW 240

Query: 241 NLEVNVENGSVSLPVS 257
           NLEVNVENGSVS PVS
Sbjct: 241 NLEVNVENGSVSFPVS 256

The following BLAST results are available for this feature:

BLAST of Bhi08G001062 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18165.1	1.2e-90	65.86	modifier of snc1,4	[more]

BLAST of Bhi08G001062 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q949S9	1.7e-89	65.86	Pre-mRNA-splicing factor SPF27 homolog OS=Arabidopsis thaliana OX=3702 GN=MOS4 P...	[more]
Q6PBE2	3.2e-27	35.32	Pre-mRNA-splicing factor SPF27 OS=Xenopus tropicalis OX=8364 GN=bcas2 PE=2 SV=1	[more]
Q5RKQ0	4.1e-27	35.89	Pre-mRNA-splicing factor SPF27 OS=Danio rerio OX=7955 GN=bcas2 PE=2 SV=1	[more]
O75934	7.0e-27	34.91	Pre-mRNA-splicing factor SPF27 OS=Homo sapiens OX=9606 GN=BCAS2 PE=1 SV=1	[more]
Q9D287	7.0e-27	34.91	Pre-mRNA-splicing factor SPF27 OS=Mus musculus OX=10090 GN=Bcas2 PE=1 SV=1	[more]

BLAST of Bhi08G001062 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQG2	2.1e-138	97.27	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042680 PE=4 SV=1	[more]
A0A1S3CHH7	1.0e-137	96.88	pre-mRNA-splicing factor SPF27 homolog OS=Cucumis melo OX=3656 GN=LOC103500959 P...	[more]
A0A6J1EDE4	4.4e-133	93.36	pre-mRNA-splicing factor SPF27 homolog OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A6J1CB04	3.8e-132	92.58	pre-mRNA-splicing factor SPF27 homolog OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1KLZ4	4.9e-132	92.97	pre-mRNA-splicing factor SPF27 homolog OS=Cucurbita maxima OX=3661 GN=LOC1114953...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 157..195
None	No IPR available	COILS	Coil	Coil	coord: 214..234
None	No IPR available	PANTHER	PTHR13296:SF0	PRE-MRNA-SPLICING FACTOR SPF27	coord: 15..239
IPR008409	Pre-mRNA-splicing factor SPF27	PFAM	PF05700	BCAS2	coord: 31..237 e-value: 5.7E-74 score: 248.2
IPR008409	Pre-mRNA-splicing factor SPF27	PANTHER	PTHR13296	BCAS2 PROTEIN	coord: 15..239

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi08M001062	Bhi08M001062	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042742	defense response to bacterium
biological_process	GO:0050832	defense response to fungus
biological_process	GO:0002758	innate immune response-activating signal transduction
biological_process	GO:0006397	mRNA processing
biological_process	GO:0008380	RNA splicing
cellular_component	GO:0071013	catalytic step 2 spliceosome
cellular_component	GO:0000974	Prp19 complex