Bhi08G001050 (gene) Wax gourd (B227) v1

Overview
NameBhi08G001050
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionUnknown protein
Locationchr8: 38727203 .. 38727790 (+)
RNA-Seq ExpressionBhi08G001050
SyntenyBhi08G001050
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAAAAGAAACCAAGAACTCAACTGGGTTTCTTCTTTCTTTGAAACCCATCCTTAGAAAAAAAAAAAAAAAAAAAGGAGGGAAATTGTAAAAATGGCAAGACTAATTAGAGAAATTGGCAGTGAAAATGGAAGTTTTGGCCTCGCCGGCGGTGACATTTATTTGCTGTTTTGGGCGGCTCTGTTTACACTCTGCATAATTTCCACCATAATTTTCTCTTGCTCGGACGGCATGTCAAAAGAGAGGAACTCCACGGCCGACGTTGAGCTTTACGGCGGCGGTTGCGCCGCCGGATGCGGCGCTGGATGTGGTGCTTGAAAATTAGAGAACCCTCTTTTTCTTTTTCTTTTCTTTTTCCCCCTCATCTTTTTATAAAGATGAATTTCACAGGCAACAAATTATGTCTCAAAATTTTAAAGCCATGAGAGAAACAGAGAGAGCCTGCTGGAAGATACTGACATCAATTTTGTTTACATTTTAATTATGATTTATCAGGGCTGAGTTTAGTGCTTCTCATTTTTCTTTAATTAAAAGTGATTATAATGTCTATACAGATTGTTAGTGGTTCTAACAACATTTGCTTCTTTAA

mRNA sequence

GAAAAAGAAACCAAGAACTCAACTGGGTTTCTTCTTTCTTTGAAACCCATCCTTAGAAAAAAAAAAAAAAAAAAAGGAGGGAAATTGTAAAAATGGCAAGACTAATTAGAGAAATTGGCAGTGAAAATGGAAGTTTTGGCCTCGCCGGCGGTGACATTTATTTGCTGTTTTGGGCGGCTCTGTTTACACTCTGCATAATTTCCACCATAATTTTCTCTTGCTCGGACGGCATGTCAAAAGAGAGGAACTCCACGGCCGACGTTGAGCTTTACGGCGGCGGTTGCGCCGCCGGATGCGGCGCTGGATGTGGTGCTTGAAAATTAGAGAACCCTCTTTTTCTTTTTCTTTTCTTTTTCCCCCTCATCTTTTTATAAAGATGAATTTCACAGGCAACAAATTATGTCTCAAAATTTTAAAGCCATGAGAGAAACAGAGAGAGCCTGCTGGAAGATACTGACATCAATTTTGTTTACATTTTAATTATGATTTATCAGGGCTGAGTTTAGTGCTTCTCATTTTTCTTTAATTAAAAGTGATTATAATGTCTATACAGATTGTTAGTGGTTCTAACAACATTTGCTTCTTTAA

Coding sequence (CDS)

ATGGCAAGACTAATTAGAGAAATTGGCAGTGAAAATGGAAGTTTTGGCCTCGCCGGCGGTGACATTTATTTGCTGTTTTGGGCGGCTCTGTTTACACTCTGCATAATTTCCACCATAATTTTCTCTTGCTCGGACGGCATGTCAAAAGAGAGGAACTCCACGGCCGACGTTGAGCTTTACGGCGGCGGTTGCGCCGCCGGATGCGGCGCTGGATGTGGTGCTTGA

Protein sequence

MARLIREIGSENGSFGLAGGDIYLLFWAALFTLCIISTIIFSCSDGMSKERNSTADVELYGGGCAAGCGAGCGA
Homology
BLAST of Bhi08G001050 vs. TAIR 10
Match: AT1G68238.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 48.9 bits (115), Expect = 2.0e-06
Identity = 24/54 (44.44%), Postives = 33/54 (61.11%), Query Frame = 0

Query: 20 GDIYLLFWAALFTLCIISTIIFSCSDGMSKERNSTADVELYGGGCAAGCGAGCG 74
          G++ L  WAA+    +I+ +IFSCSD  SK   +    ++ G  CAAGCG GCG
Sbjct: 14 GEVSLYIWAAVVAFSVIAAVIFSCSDRASKPHTND---DVNGSSCAAGCGGGCG 64

BLAST of Bhi08G001050 vs. TAIR 10
Match: AT3G18250.1 (Putative membrane lipoprotein )

HSP 1 Score: 43.9 bits (102), Expect = 6.5e-05
Identity = 23/53 (43.40%), Postives = 35/53 (66.04%), Query Frame = 0

Query: 22 IYLLFWAALFTLCIISTIIFSCSDGMSKERNSTADVELYGGGC-AAGCGAGCG 74
          ++ + + A+   CI+S ++FSC+DG+S  R +T+     GGGC  AGCG GCG
Sbjct: 24 LFHVVFLAVIGCCILSALLFSCADGVSDNR-ATSGTSTGGGGCGGAGCGGGCG 75

BLAST of Bhi08G001050 vs. ExPASy TrEMBL
Match: A0A0A0LQU7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042580 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.9e-28
Identity = 64/74 (86.49%), Postives = 69/74 (93.24%), Query Frame = 0

Query: 1  MARLIREIGSENGSFGLAGGDIYLLFWAALFTLCIISTIIFSCSDGMSKERNSTADVELY 60
          MARL+REI S+NGSFGLAGG+ Y LFW ALFTLCIIST+IFSCSDGMSK+RNST DVELY
Sbjct: 1  MARLMREISSQNGSFGLAGGETYWLFWVALFTLCIISTLIFSCSDGMSKDRNSTVDVELY 60

Query: 61 GGGCAAGCGAGCGA 75
          GGGCAAGCGAGCGA
Sbjct: 61 GGGCAAGCGAGCGA 74

BLAST of Bhi08G001050 vs. ExPASy TrEMBL
Match: A0A6P3ZT85 (uncharacterized protein LOC107418606 OS=Ziziphus jujuba OX=326968 GN=LOC107418606 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 8.3e-16
Identity = 48/74 (64.86%), Postives = 58/74 (78.38%), Query Frame = 0

Query: 1  MARLIREIGSENGSFGLAGGDIYLLFWAALFTLCIISTIIFSCSDGMSKERNSTADVELY 60
          M RL R++ S +GS G AG   +++ W AL  +CIIS IIFSC+DG+SKE+ STAD ELY
Sbjct: 1  MVRLWRDLASVHGS-GSAG---FVVLWLALLGVCIISAIIFSCADGVSKEKTSTADTELY 60

Query: 61 GGGCAAGCGAGCGA 75
          GGGCAAGCGAGCGA
Sbjct: 61 GGGCAAGCGAGCGA 70

BLAST of Bhi08G001050 vs. ExPASy TrEMBL
Match: A0A803R005 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 2.4e-15
Identity = 44/74 (59.46%), Postives = 52/74 (70.27%), Query Frame = 0

Query: 1  MARLIREIGSENGSFGLAGGDIYLLFWAALFTLCIISTIIFSCSDGMSKERNSTADVELY 60
          M RL RE+ + +G  G   G   +     L TLCI+STIIFSC+DG+SKE+ S  D ELY
Sbjct: 1  MVRLWREVANVDGGVGTGSGAFLIFLLGFLVTLCILSTIIFSCADGVSKEKTSQGDTELY 60

Query: 61 GGGCAAGCGAGCGA 75
          GGGCAAGCGAGCGA
Sbjct: 61 GGGCAAGCGAGCGA 74

BLAST of Bhi08G001050 vs. ExPASy TrEMBL
Match: A0A803R004 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 2.4e-15
Identity = 44/74 (59.46%), Postives = 52/74 (70.27%), Query Frame = 0

Query: 1  MARLIREIGSENGSFGLAGGDIYLLFWAALFTLCIISTIIFSCSDGMSKERNSTADVELY 60
          M RL RE+ + +G  G   G   +     L TLCI+STIIFSC+DG+SKE+ S  D ELY
Sbjct: 1  MVRLWREVANVDGGVGTGSGAFLIFLLGFLVTLCILSTIIFSCADGVSKEKTSQGDTELY 60

Query: 61 GGGCAAGCGAGCGA 75
          GGGCAAGCGAGCGA
Sbjct: 61 GGGCAAGCGAGCGA 74

BLAST of Bhi08G001050 vs. ExPASy TrEMBL
Match: A0A2P5AQX4 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_308610 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.2e-14
Identity = 45/74 (60.81%), Postives = 54/74 (72.97%), Query Frame = 0

Query: 1  MARLIREIGSENGSFGLAGGDIYLLFWAALF-TLCIISTIIFSCSDGMSKERNSTADVEL 60
          M RL RE    +G  G +    +L+F+  L  TLCI+STIIFSC+DG+SKE+ S AD EL
Sbjct: 1  MVRLWREAAGVDGGVGSSHSGTFLVFFLGLLVTLCILSTIIFSCTDGVSKEKTSQADTEL 60

Query: 61 YGGGCAAGCGAGCG 74
          YGGGCAAGCGAGCG
Sbjct: 61 YGGGCAAGCGAGCG 74

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT1G68238.12.0e-0644.44unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G18250.16.5e-0543.40Putative membrane lipoprotein [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LQU71.9e-2886.49Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042580 PE=4 SV=1[more]
A0A6P3ZT858.3e-1664.86uncharacterized protein LOC107418606 OS=Ziziphus jujuba OX=326968 GN=LOC10741860... [more]
A0A803R0052.4e-1559.46Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803R0042.4e-1559.46Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A2P5AQX41.2e-1460.81Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_308610 PE... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37199TRANSMEMBRANE PROTEINcoord: 1..74
NoneNo IPR availablePANTHERPTHR37199:SF2MEMBRANE LIPOPROTEIN-RELATEDcoord: 1..74

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi08M001050Bhi08M001050mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane