Bhi08G001048 (gene) Wax gourd (B227) v1

Overview
NameBhi08G001048
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionNon-specific lipid-transfer protein 2
Locationchr8: 38681874 .. 38682146 (-)
RNA-Seq ExpressionBhi08G001048
SyntenyBhi08G001048
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGCATCACAGATTGCACTAAGTATGTTAGTGATGTTTATCATGGTTGAGATTTCATTGGCAGTGACATGCAGTCCAGTGGAACTGAGTTCCTGTGTTAGTGCACTCATATCTTCAGTTCCACCATCTAAGCTCTGTTGCTCTAAGATTAAGGAACAGAAACCCTGCCTCTGCAAGTACATGCAGAACCCCACTCTAAAGAAGTTTGTGGCCTCTCCCAATGCCAGGAAAGTTGCTACCACTTGTGGAACTCCATTTCCCAAGTGCTAG

mRNA sequence

ATGAAGGCATCACAGATTGCACTAAGTATGTTAGTGATGTTTATCATGGTTGAGATTTCATTGGCAGTGACATGCAGTCCAGTGGAACTGAGTTCCTGTGTTAGTGCACTCATATCTTCAGTTCCACCATCTAAGCTCTGTTGCTCTAAGATTAAGGAACAGAAACCCTGCCTCTGCAAGTACATGCAGAACCCCACTCTAAAGAAGTTTGTGGCCTCTCCCAATGCCAGGAAAGTTGCTACCACTTGTGGAACTCCATTTCCCAAGTGCTAG

Coding sequence (CDS)

ATGAAGGCATCACAGATTGCACTAAGTATGTTAGTGATGTTTATCATGGTTGAGATTTCATTGGCAGTGACATGCAGTCCAGTGGAACTGAGTTCCTGTGTTAGTGCACTCATATCTTCAGTTCCACCATCTAAGCTCTGTTGCTCTAAGATTAAGGAACAGAAACCCTGCCTCTGCAAGTACATGCAGAACCCCACTCTAAAGAAGTTTGTGGCCTCTCCCAATGCCAGGAAAGTTGCTACCACTTGTGGAACTCCATTTCCCAAGTGCTAG

Protein sequence

MKASQIALSMLVMFIMVEISLAVTCSPVELSSCVSALISSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVATTCGTPFPKC
Homology
BLAST of Bhi08G001048 vs. TAIR 10
Match: AT3G18280.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 103.2 bits (256), Expect = 1.1e-22
Identity = 47/87 (54.02%), Postives = 69/87 (79.31%), Query Frame = 0

Query: 4  SQIALSMLVMFIMVEISLAVTCSPVELSSCVSALISSVPPSKLCCSKIKEQKPCLCKYMQ 63
          S  AL+ +++ I+   + AVTCSP++LS C +A+ SS PPS LCC+K+KEQ+PCLC YM+
Sbjct: 10 SLFALAAVLLMILAPAAEAVTCSPMQLSPCATAITSSSPPSALCCAKLKEQRPCLCGYMR 69

Query: 64 NPTLKKFVASPNARKVATTCGTPFPKC 91
          NP+L++FV++PNARKV+ +C  P P+C
Sbjct: 70 NPSLRRFVSTPNARKVSKSCKLPIPRC 96

BLAST of Bhi08G001048 vs. TAIR 10
Match: AT1G48750.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 102.1 bits (253), Expect = 2.5e-22
Identity = 46/90 (51.11%), Postives = 70/90 (77.78%), Query Frame = 0

Query: 1  MKASQIALSMLVMFIMVEISLAVTCSPVELSSCVSALISSVPPSKLCCSKIKEQKPCLCK 60
          M  S +AL+  ++ + V ++  VTCSP++L+SC +A+ SS PPS+ CC+K++EQ+PCLC 
Sbjct: 5  MWVSVLALAAAILLLTVPVAEGVTCSPMQLASCAAAMTSSSPPSEACCTKLREQQPCLCG 64

Query: 61 YMQNPTLKKFVASPNARKVATTCGTPFPKC 91
          YM+NPTL+++V+SPNARKV+ +C  P P C
Sbjct: 65 YMRNPTLRQYVSSPNARKVSNSCKIPSPSC 94

BLAST of Bhi08G001048 vs. TAIR 10
Match: AT1G73780.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 80.5 bits (197), Expect = 7.7e-16
Identity = 36/83 (43.37%), Postives = 56/83 (67.47%), Query Frame = 0

Query: 10 MLVMFIMVEISLAVT--CSPVELSSCVSALISSVPPSKLCCSKIKEQKPCLCKYMQNPTL 69
          +L++ +  E  +A    C+P +LS C+  ++    PS LCCSK+KEQ+ C+C+Y++NP  
Sbjct: 16 LLILIVAQENRVAAVDPCNPAQLSPCLETIMKGSEPSDLCCSKVKEQQHCICQYLKNPNF 75

Query: 70 KKFVASPNARKVATTCGTPFPKC 91
          K F+ SPNA+ +AT C  P+PKC
Sbjct: 76 KSFLNSPNAKIIATDCHCPYPKC 98

BLAST of Bhi08G001048 vs. TAIR 10
Match: AT5G38170.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 79.3 bits (194), Expect = 1.7e-15
Identity = 41/103 (39.81%), Postives = 62/103 (60.19%), Query Frame = 0

Query: 1   MKASQIALSMLVMFIMV--------EISLA-----VTCSPVELSSCVSALISSVPPSKLC 60
           MK + +   + V+ +MV        E+ L+     VTC  V+LSSC + +++ VPPS  C
Sbjct: 1   MKFTALVFIVFVVGVMVSPVSIRATEVKLSGGEADVTCDAVQLSSCATPMLTGVPPSTEC 60

Query: 61  CSKIKEQKPCLCKYMQNPTLKKFVASPNARKVATTCGTPFPKC 91
           C K+KEQ+PC C Y+++P   ++V S NA+K   TCG P+P C
Sbjct: 61  CGKLKEQQPCFCTYIKDPRYSQYVGSANAKKTLATCGVPYPTC 103

BLAST of Bhi08G001048 vs. TAIR 10
Match: AT5G38160.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 78.2 bits (191), Expect = 3.8e-15
Identity = 34/68 (50.00%), Postives = 43/68 (63.24%), Query Frame = 0

Query: 23  VTCSPVELSSCVSALISSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVATT 82
           VTC   +LSSCV+A+ +  PPS  CC K+KE + CLC Y+QNP    +V SPNARK    
Sbjct: 36  VTCDATQLSSCVTAVSTGAPPSTDCCGKLKEHETCLCTYIQNPLYSSYVTSPNARKTLAA 95

Query: 83  CGTPFPKC 91
           C   +P C
Sbjct: 96  CDVAYPTC 103

BLAST of Bhi08G001048 vs. ExPASy Swiss-Prot
Match: P82353 (Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 1.8e-17
Identity = 37/68 (54.41%), Postives = 52/68 (76.47%), Query Frame = 0

Query: 23 VTCSPVELSSCVSALISSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVATT 82
          VTCSPV+LS C+  + S  P    CC K++EQ+PCLC Y++NP+L+++V SPNARK+A+ 
Sbjct: 1  VTCSPVQLSPCLGPINSGAPSPTTCCQKLREQRPCLCGYLKNPSLRQYVNSPNARKLASN 60

Query: 83 CGTPFPKC 91
          CG P P+C
Sbjct: 61 CGVPVPQC 68

BLAST of Bhi08G001048 vs. ExPASy Swiss-Prot
Match: Q43681 (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 PE=2 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 3.0e-17
Identity = 43/93 (46.24%), Postives = 63/93 (67.74%), Query Frame = 0

Query: 1  MKASQIALSMLVMFIMVE---ISLAVTCSPVELSSCVSALISSVPPSKLCCSKIKEQKPC 60
          MK S +   ++V   +++   ++ AVTC+P ELSSCV A+     PS  CCSK+K Q+PC
Sbjct: 7  MKMSVVCAVVVVALFLIDVGPVAEAVTCNPTELSSCVPAITGGSKPSSTCCSKLKVQEPC 66

Query: 61 LCKYMQNPTLKKFVASPNARKVATTCGTPFPKC 91
          LC Y++NP+LK++V SP A+KV + CG  +P C
Sbjct: 67 LCNYIKNPSLKQYVNSPGAKKVLSNCGVTYPNC 99

BLAST of Bhi08G001048 vs. ExPASy Swiss-Prot
Match: P86809 (Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum OX=278110 PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 2.2e-15
Identity = 37/67 (55.22%), Postives = 50/67 (74.63%), Query Frame = 0

Query: 24 TCSPVELSSCVSALISSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVATTC 83
          TCS V+LS C++A+  + PPS  CC+K+KEQKPCLC Y+++P LK +V SP ARK A++C
Sbjct: 2  TCSAVQLSPCLAAITKNTPPSAACCNKLKEQKPCLCGYLKDPNLKNYVNSPGARKTASSC 61

Query: 84 GTPFPKC 91
          G    KC
Sbjct: 62 GVAL-KC 67

BLAST of Bhi08G001048 vs. ExPASy Swiss-Prot
Match: P82901 (Non-specific lipid-transfer protein 2P OS=Triticum aestivum OX=4565 PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 2.3e-09
Identity = 25/66 (37.88%), Postives = 40/66 (60.61%), Query Frame = 0

Query: 25 CSPVELSSCVSALISSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVATTCG 84
          C   +L+ C SA++S   PS  CC  ++ Q+PC C+Y ++PT  +++ SP+AR    +CG
Sbjct: 2  CQASQLAVCASAILSGAKPSGECCGNLRAQQPCFCQYAKDPTYGQYIRSPHARDTLQSCG 61

Query: 85 TPFPKC 91
             P C
Sbjct: 62 LAVPHC 67

BLAST of Bhi08G001048 vs. ExPASy Swiss-Prot
Match: P82900 (Non-specific lipid-transfer protein 2G OS=Triticum aestivum OX=4565 PE=1 SV=2)

HSP 1 Score: 58.2 bits (139), Expect = 5.7e-08
Identity = 29/92 (31.52%), Postives = 48/92 (52.17%), Query Frame = 0

Query: 1  MKASQIALSMLVMFIMVEI--SLAVTCSPVELSSCVSALISSVPPSKLCCSKIKEQKPCL 60
          MK   +   ML + ++          C   +L+ C SA++S   PS  CC  ++ Q+ C 
Sbjct: 5  MKKQVVTALMLALVVLAAAPGGARAACQASQLAVCASAILSGAKPSGECCGNLRAQQGCF 64

Query: 61 CKYMQNPTLKKFVASPNARKVATTCGTPFPKC 91
          C+Y ++PT  +++ SP+AR   T+CG   P C
Sbjct: 65 CQYAKDPTYGQYIRSPHARDTLTSCGLAVPHC 96

BLAST of Bhi08G001048 vs. ExPASy TrEMBL
Match: A0A0A0LVT5 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G042560 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 3.0e-36
Identity = 80/90 (88.89%), Postives = 87/90 (96.67%), Query Frame = 0

Query: 1  MKASQIALSMLVMFIMVEISLAVTCSPVELSSCVSALISSVPPSKLCCSKIKEQKPCLCK 60
          MKASQIALS++VMF+ VEI++AVTCSPV+LSSCVSA+ SSVPPSKLCCSKIKEQKPCLCK
Sbjct: 1  MKASQIALSIIVMFMTVEITMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 60

Query: 61 YMQNPTLKKFVASPNARKVATTCGTPFPKC 91
          YMQNPTLKKFVASPNARKVA TCGTPFPKC
Sbjct: 61 YMQNPTLKKFVASPNARKVANTCGTPFPKC 90

BLAST of Bhi08G001048 vs. ExPASy TrEMBL
Match: A0A5D3BJV8 (Non-specific lipid-transfer protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002150 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 4.0e-36
Identity = 79/90 (87.78%), Postives = 88/90 (97.78%), Query Frame = 0

Query: 1  MKASQIALSMLVMFIMVEISLAVTCSPVELSSCVSALISSVPPSKLCCSKIKEQKPCLCK 60
          MKASQIALS++VMF+MVEIS+AVTCSPV+LSSCVSA+ SSVPPS LCCSKIKEQ+PCLCK
Sbjct: 1  MKASQIALSIIVMFMMVEISMAVTCSPVQLSSCVSAITSSVPPSSLCCSKIKEQRPCLCK 60

Query: 61 YMQNPTLKKFVASPNARKVATTCGTPFPKC 91
          YMQNPTLKKFVASPNA+KVA+TCGTPFPKC
Sbjct: 61 YMQNPTLKKFVASPNAKKVASTCGTPFPKC 90

BLAST of Bhi08G001048 vs. ExPASy TrEMBL
Match: A0A6J1ECM2 (non-specific lipid-transfer protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111431330 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 8.8e-36
Identity = 78/90 (86.67%), Postives = 87/90 (96.67%), Query Frame = 0

Query: 1  MKASQIALSMLVMFIMVEISLAVTCSPVELSSCVSALISSVPPSKLCCSKIKEQKPCLCK 60
          MKASQIA+S+LVMF+M E+S+AVTCSP++LSSCVSA+ SSVPPSKLCCSKIKEQKPCLCK
Sbjct: 1  MKASQIAVSILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 60

Query: 61 YMQNPTLKKFVASPNARKVATTCGTPFPKC 91
          YMQNPTL+KFVASPNARKVA TCGTPFPKC
Sbjct: 61 YMQNPTLRKFVASPNARKVANTCGTPFPKC 90

BLAST of Bhi08G001048 vs. ExPASy TrEMBL
Match: A0A6J1KNT4 (probable non-specific lipid-transfer protein AKCS9 OS=Cucurbita maxima OX=3661 GN=LOC111495166 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 2.0e-35
Identity = 77/90 (85.56%), Postives = 87/90 (96.67%), Query Frame = 0

Query: 1   MKASQIALSMLVMFIMVEISLAVTCSPVELSSCVSALISSVPPSKLCCSKIKEQKPCLCK 60
           MKASQIA+++LVMF+M E+S+AVTCSP++LSSCVSA+ SSVPPSKLCCSKIKEQKPCLCK
Sbjct: 51  MKASQIAVTILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 110

Query: 61  YMQNPTLKKFVASPNARKVATTCGTPFPKC 91
           YMQNPTL+KFVASPNARKVA TCGTPFPKC
Sbjct: 111 YMQNPTLRKFVASPNARKVANTCGTPFPKC 140

BLAST of Bhi08G001048 vs. ExPASy TrEMBL
Match: V7C3M6 (AAI domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_004G154200g PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 6.1e-29
Identity = 68/92 (73.91%), Postives = 81/92 (88.04%), Query Frame = 0

Query: 1  MKASQIALSMLVMFIM--VEISLAVTCSPVELSSCVSALISSVPPSKLCCSKIKEQKPCL 60
          MKA+ IAL  LV+ ++  V++S+AVTCSPV+LSSCVSA+ SS PPS LCCSKIKEQKPCL
Sbjct: 1  MKAAHIALCTLVVLLVAEVQVSMAVTCSPVQLSSCVSAITSSTPPSNLCCSKIKEQKPCL 60

Query: 61 CKYMQNPTLKKFVASPNARKVATTCGTPFPKC 91
          CKY++NP LKKFV SPNARKVA+TCGTPFP+C
Sbjct: 61 CKYLKNPNLKKFVDSPNARKVASTCGTPFPRC 92

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT3G18280.11.1e-2254.02Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT1G48750.12.5e-2251.11Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT1G73780.17.7e-1643.37Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT5G38170.11.7e-1539.81Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT5G38160.13.8e-1550.00Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
Match NameE-valueIdentityDescription
P823531.8e-1754.41Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1[more]
Q436813.0e-1746.24Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 ... [more]
P868092.2e-1555.22Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum OX=27811... [more]
P829012.3e-0937.88Non-specific lipid-transfer protein 2P OS=Triticum aestivum OX=4565 PE=1 SV=1[more]
P829005.7e-0831.52Non-specific lipid-transfer protein 2G OS=Triticum aestivum OX=4565 PE=1 SV=2[more]
Match NameE-valueIdentityDescription
A0A0A0LVT53.0e-3688.89AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G042560 PE=4 SV... [more]
A0A5D3BJV84.0e-3687.78Non-specific lipid-transfer protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A6J1ECM28.8e-3686.67non-specific lipid-transfer protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC1... [more]
A0A6J1KNT42.0e-3585.56probable non-specific lipid-transfer protein AKCS9 OS=Cucurbita maxima OX=3661 G... [more]
V7C3M66.1e-2973.91AAI domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_004G154200g... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainPFAMPF14368LTP_2coord: 22..86
e-value: 1.0E-6
score: 28.8
IPR036312Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamilyGENE3D1.10.110.10coord: 23..90
e-value: 1.7E-22
score: 81.4
IPR036312Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamilySUPERFAMILY47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 24..90
NoneNo IPR availablePANTHERPTHR33214:SF30BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEINcoord: 2..90
IPR033872Non-specific lipid-transfer protein type 2PANTHERPTHR33214BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEINcoord: 2..90
IPR033872Non-specific lipid-transfer protein type 2CDDcd01959nsLTP2coord: 25..90
e-value: 7.83771E-26
score: 88.9098

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi08M001048Bhi08M001048mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006869 lipid transport