Bhi08G000973 (gene) Wax gourd (B227) v1

Overview


Name	Bhi08G000973
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Disulfide bond formation protein B 2, putative
Location	chr8: 36540976 .. 36542655 (+)
RNA-Seq Expression	Bhi08G000973
Synteny	Bhi08G000973

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATACTCCCACTACCCCATTGACCTTATAAATGAGTGCACACCATGAGTTTGCCCTTCTCATATTCTCCTGTCATCCTCCACTTTCCCACAGTGTCTTCCAACTTTTCTCGCCATATTGACTTTTAAAATATCATAATTTTTCCTTTTCCCCCACTTCCCAAGTTTTCATCTTTCATTTTCCACACAGAATCCTAAGCTTTAATTAAAACCACCCCTGTCAAAACATTCAAACATACAGACAAACCACCTCCATATAATATGTTTCTTGTTGCTGTCACTTTCTTTTTGACTTGGTGTGTAACAATCTGATAAATTGCCCTCTAGCTAGACCACCCATCAAACACGTTTTCTTTTTCCCCTTTAAACCAATCAGCTTTGAGATTTCATTTATAAATACCTCCATTCTCTTCCTCTGCTTTGAAGCAGAGAGCAGTTTCATCATCAATGGCAGCAGCCACTCATTTCCTTCGTTTACTTGTCATATTCTTGGGACTTTGTAGCCTTCTTTGTTCAAATGCTGTCCCAACTTCAAGTAAGCCTCTCAAATCAATCCCTTTTCTCTTCTTTTCTTTCTTCTTCTTGCAAAATGAACTAAACACTTCTGATCTGATTCTGTAGGAAGTGTCAGCCTCTTGCGCGGATCTCATCCATTTCTTCTTGTTTCAAGCAACACCCACATGGTATATTACATTATCCATCAACCTCAATGTCATTATCCCTCCAAGGTTTTAGCTTTCGTGTTAATTTTACATAGGATCAGAGAAGGAGATTATGTGTTGAAACTCTATATTGTCCTTTCTTCTCCCAGTACTAGGGTTAAGAAATTGACCATCTATCACGAAACGTAAAACAATATAGAATCGACATACAGATTTGTGGTTTACTAATAGTGTATTAACTACATCCTCCGCGGATTGGAGGAGAAAGCAGTTTTATTAGAGAGAAAATCATCAGTAGGTTTAGAAAATTTATATAGTGCATTTCTCTAAATCCTTTAACCAAAATTGTAAATAGCGCAAATAACATAATATGAATACAACTTAGATTTCGGGGGCGTTTGAAACGTTAGATTACAGATTCAAGACATTCCAACAACTAGCAATGACCACTAGGGTTTTGAAAATTAGAGTGTTACGAGAATAAATTTATCATAACTTATCTGTTTATGTTATAACATGGAAGGTTTTCTGTTTGTGCAGGTGACTGCAACAGAGGAAGAAGTGAGTCGTGGAAGAATGGTTGTGGCACTAAATGACTATCCAGGGTCAGGAGCCAACAATCGTCATACACCAAGGCCACAATTTAGGGGCTGTGCTGATTGTTGATTATATTTTGCATTACATATTTTAGGGATTGGTTGGGCTTTAGAATTATAATATATATTGGTTTGAAATATCTATCTATCTATAACTATTTTATATGTATTATATGGGAATATGGAGGCAGGGTTTGAGCTTCTTCATCACTCTATTAAGCTGTTGAAAAGCTGAGGAAAGAGGTGGGTAGAGAATTTTATGAGATTAGGTGAAAAATGAGTACCAAAAATATGTGTACTTTTGTAAAACAAAGAGACATTACTTGGCTTCTTTATTCAGTAATATATGATTTTGAGGGCTGAAATTAACGCCATTGGATCTGTTTATTAAATTTATTGCTGCTGCAGATTCTAATCAATTTG

mRNA sequence

TTATACTCCCACTACCCCATTGACCTTATAAATGAGTGCACACCATGAGTTTGCCCTTCTCATATTCTCCTGTCATCCTCCACTTTCCCACAGTGTCTTCCAACTTTTCTCGCCATATTGACTTTTAAAATATCATAATTTTTCCTTTTCCCCCACTTCCCAAGTTTTCATCTTTCATTTTCCACACAGAATCCTAAGCTTTAATTAAAACCACCCCTGTCAAAACATTCAAACATACAGACAAACCACCTCCATATAATATGTTTCTTGTTGCTGTCACTTTCTTTTTGACTTGGTGTGTAACAATCTGATAAATTGCCCTCTAGCTAGACCACCCATCAAACACGTTTTCTTTTTCCCCTTTAAACCAATCAGCTTTGAGATTTCATTTATAAATACCTCCATTCTCTTCCTCTGCTTTGAAGCAGAGAGCAGTTTCATCATCAATGGCAGCAGCCACTCATTTCCTTCGTTTACTTGTCATATTCTTGGGACTTTGTAGCCTTCTTTGTTCAAATGCTGTCCCAACTTCAAGAAGTGTCAGCCTCTTGCGCGGATCTCATCCATTTCTTCTTGTTTCAAGCAACACCCACATGGTGACTGCAACAGAGGAAGAAGTGAGTCGTGGAAGAATGGTTGTGGCACTAAATGACTATCCAGGGTCAGGAGCCAACAATCGTCATACACCAAGGCCACAATTTAGGGGCTGTGCTGATTGTTGATTATATTTTGCATTACATATTTTAGGGATTGGTTGGGCTTTAGAATTATAATATATATTGGTTTGAAATATCTATCTATCTATAACTATTTTATATGTATTATATGGGAATATGGAGGCAGGGTTTGAGCTTCTTCATCACTCTATTAAGCTGTTGAAAAGCTGAGGAAAGAGGTGGGTAGAGAATTTTATGAGATTAGGTGAAAAATGAGTACCAAAAATATGTGTACTTTTGTAAAACAAAGAGACATTACTTGGCTTCTTTATTCAGTAATATATGATTTTGAGGGCTGAAATTAACGCCATTGGATCTGTTTATTAAATTTATTGCTGCTGCAGATTCTAATCAATTTG

Coding sequence (CDS)

ATGGCAGCAGCCACTCATTTCCTTCGTTTACTTGTCATATTCTTGGGACTTTGTAGCCTTCTTTGTTCAAATGCTGTCCCAACTTCAAGAAGTGTCAGCCTCTTGCGCGGATCTCATCCATTTCTTCTTGTTTCAAGCAACACCCACATGGTGACTGCAACAGAGGAAGAAGTGAGTCGTGGAAGAATGGTTGTGGCACTAAATGACTATCCAGGGTCAGGAGCCAACAATCGTCATACACCAAGGCCACAATTTAGGGGCTGTGCTGATTGTTGA

Protein sequence

MAAATHFLRLLVIFLGLCSLLCSNAVPTSRSVSLLRGSHPFLLVSSNTHMVTATEEEVSRGRMVVALNDYPGSGANNRHTPRPQFRGCADC

Homology

[Close]

BLAST of Bhi08G000973 vs. TAIR 10
Match: AT3G47510.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; Has 15 Blast hits to 15 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.1 bits (105), Expect = 3.6e-05
Identity = 36/85 (42.35%), Postives = 44/85 (51.76%), Query Frame = 0


Query: 8  LRLLVIFLGLCSLLCSNAVPTSRSVSLLRGSHPFLLVSSNTHMVTATEEEVSRGRMVVAL 67
          + LLVIF    S +       SR  SL+       +V      +   ++EV   RMV+ L
Sbjct: 7  IHLLVIFFLALSHIFFFPSHASRLGSLMEKPK---IVRPQQDTLMDVKKEVEE-RMVMEL 66

Query: 68 NDYPGSGANNRHTPRPQFRGC-ADC 92
          NDYPGSGANNRH PR   RGC  DC
Sbjct: 67 NDYPGSGANNRHLPRQ--RGCVVDC 85

[Close]

BLAST of Bhi08G000973 vs. TAIR 10
Match: AT1G74458.1 (unknown protein; LOCATED IN: endomembrane system; Has 9 Blast hits to 9 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 40.8 bits (94), Expect = 6.8e-04
Identity = 17/25 (68.00%), Postives = 19/25 (76.00%), Query Frame = 0


Query: 67 LNDYPGSGANNRHTPRPQFRGCADC 92
          +NDYPGSGANNRHTP      C+DC
Sbjct: 75 INDYPGSGANNRHTPH-----CSDC 94

[Close]

BLAST of Bhi08G000973 vs. ExPASy TrEMBL
Match: A0A5D3BKK4 (Putative Disulfide bond formation protein B 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00920 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 3.1e-36
Identity = 81/91 (89.01%), Postives = 84/91 (92.31%), Query Frame = 0


Query: 1  MAAATHFLRLLVIFLGLCSLLCSNAVPTSRSVSLLRGSHPFLLVSSNTHMVTATEEEVSR 60
          MAAA+HFLRLLVIFLGL +LLCSNAVPTSRSVSLL GS PFL VSS+THMVT TEEE S 
Sbjct: 1  MAAASHFLRLLVIFLGLYNLLCSNAVPTSRSVSLLHGSLPFLHVSSDTHMVTKTEEEESH 60

Query: 61 GRMVVALNDYPGSGANNRHTPRPQFRGCADC 92
          GRMVVALNDYPGSGANNRHTPRPQFRGCADC
Sbjct: 61 GRMVVALNDYPGSGANNRHTPRPQFRGCADC 91

[Close]

BLAST of Bhi08G000973 vs. ExPASy TrEMBL
Match: A0A1S3B758 (uncharacterized protein LOC103486492 OS=Cucumis melo OX=3656 GN=LOC103486492 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 3.1e-36
Identity = 81/91 (89.01%), Postives = 84/91 (92.31%), Query Frame = 0


Query: 1  MAAATHFLRLLVIFLGLCSLLCSNAVPTSRSVSLLRGSHPFLLVSSNTHMVTATEEEVSR 60
          MAAA+HFLRLLVIFLGL +LLCSNAVPTSRSVSLL GS PFL VSS+THMVT TEEE S 
Sbjct: 1  MAAASHFLRLLVIFLGLYNLLCSNAVPTSRSVSLLHGSLPFLHVSSDTHMVTKTEEEESH 60

Query: 61 GRMVVALNDYPGSGANNRHTPRPQFRGCADC 92
          GRMVVALNDYPGSGANNRHTPRPQFRGCADC
Sbjct: 61 GRMVVALNDYPGSGANNRHTPRPQFRGCADC 91

[Close]

BLAST of Bhi08G000973 vs. ExPASy TrEMBL
Match: A0A5A7T3C3 (Putative Disulfide bond formation protein B 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold112G00820 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 6.8e-36
Identity = 80/91 (87.91%), Postives = 84/91 (92.31%), Query Frame = 0


Query: 1  MAAATHFLRLLVIFLGLCSLLCSNAVPTSRSVSLLRGSHPFLLVSSNTHMVTATEEEVSR 60
          MAAA+HFLRLLVIFLGL +LLCSNAVPTSRSVSLL GS PFL VS++THMVT TEEE S 
Sbjct: 1  MAAASHFLRLLVIFLGLYNLLCSNAVPTSRSVSLLHGSLPFLHVSTDTHMVTKTEEEESH 60

Query: 61 GRMVVALNDYPGSGANNRHTPRPQFRGCADC 92
          GRMVVALNDYPGSGANNRHTPRPQFRGCADC
Sbjct: 61 GRMVVALNDYPGSGANNRHTPRPQFRGCADC 91

[Close]

BLAST of Bhi08G000973 vs. ExPASy TrEMBL
Match: A0A0A0LQ59 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G033240 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 9.9e-35
Identity = 80/91 (87.91%), Postives = 82/91 (90.11%), Query Frame = 0


Query: 1  MAAATHFLRLLVIFLGLCSLLCSNAVPTSRSVSLLRGSHPFLLVSSNTHMVTATEEEVSR 60
          MAAA+HFLRLLVIFLGL +LLCSNAVPTSRSVSLL GS PF  VSSNT MVT TEEE S 
Sbjct: 1  MAAASHFLRLLVIFLGLYNLLCSNAVPTSRSVSLLHGSLPFPHVSSNTLMVTKTEEEESH 60

Query: 61 GRMVVALNDYPGSGANNRHTPRPQFRGCADC 92
          GRMVVALNDYPGSGANNRHTPRPQFRGCADC
Sbjct: 61 GRMVVALNDYPGSGANNRHTPRPQFRGCADC 91

[Close]

BLAST of Bhi08G000973 vs. ExPASy TrEMBL
Match: A0A6J1CAG5 (uncharacterized protein LOC111008913 OS=Momordica charantia OX=3673 GN=LOC111008913 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 4.6e-32
Identity = 74/91 (81.32%), Postives = 77/91 (84.62%), Query Frame = 0


Query: 1  MAAATHFLRLLVIFLGLCSLLCSNAVPTSRSVSLLRGSHPFLLVSSNTHMVTATEEEVSR 60
          MAA T  LRLLVIFLG CSLL SNAVPTSRSVSL+ G+  FL VSS THMV+  EEEV  
Sbjct: 1  MAAPTPLLRLLVIFLGFCSLLSSNAVPTSRSVSLIHGADQFLQVSSKTHMVSGGEEEVKH 60

Query: 61 GRMVVALNDYPGSGANNRHTPRPQFRGCADC 92
          GRMVVALNDYPGSGANNRHTPRPQFRGCADC
Sbjct: 61 GRMVVALNDYPGSGANNRHTPRPQFRGCADC 91

The following BLAST results are available for this feature:

BLAST of Bhi08G000973 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47510.1	3.6e-05	42.35	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G74458.1	6.8e-04	68.00	unknown protein; LOCATED IN: endomembrane system; Has 9 Blast hits to 9 proteins...	[more]

BLAST of Bhi08G000973 vs. TAIR 10


Match Name	E-value	Identity	Description

BLAST of Bhi08G000973 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BKK4	3.1e-36	89.01	Putative Disulfide bond formation protein B 2 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A1S3B758	3.1e-36	89.01	uncharacterized protein LOC103486492 OS=Cucumis melo OX=3656 GN=LOC103486492 PE=...	[more]
A0A5A7T3C3	6.8e-36	87.91	Putative Disulfide bond formation protein B 2 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A0A0LQ59	9.9e-35	87.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G033240 PE=4 SV=1	[more]
A0A6J1CAG5	4.6e-32	81.32	uncharacterized protein LOC111008913 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33474:SF2	TRANSMEMBRANE PROTEIN	coord: 2..86
None	No IPR available	PANTHER	PTHR33474	TRANSMEMBRANE PROTEIN	coord: 2..86

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi08M000973	Bhi08M000973	mRNA