Bhi08G000909 (gene) Wax gourd (B227) v1

Overview


Name	Bhi08G000909
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Unknown protein
Location	chr8: 34987460 .. 34988005 (+)
RNA-Seq Expression	Bhi08G000909
Synteny	Bhi08G000909

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGAGAAGGAAAGCTGATGCTGATAACTACAACTCCCATGGCTGCAATTGGAAAACTCGACACTGAAATTCAATTCGATCTTTGCAAATTCGACACCAAATTCGACGCAGCAAAAGCAGCGGAACCGCCGACGACGGAGACCAAAGCCACCGACACCTGCAACGCGATCTGCCAAACACTATCCTCCGGCACCAAATACACACACGAAGGCCCTAATAACAACAGCCCTAAGCTCAGGCTCAGTAGCGCCCCGGGAGTTCCTGGATCTGTCGCCGCCGATAAAATCCCCAATTCCTCAGCCTTCGACAGAAGCCCTAATTTCTCAATCGACGACAGAGACAACCCGGCTTTCTCTGCCGCAGACAGAAGACCGGCCTTCTCCGCCTTGCTCAGTAGCTTCAATTGCTCCACTCTCGTCAGTAGCTTAATCGGCGGGGAAGTCGAGAGCGAGATGCTGGTCCTCGGTCCTTTCTCGCCGAGAGGGAACACCGTGGAGTTTATCTGCACAATGCTGGCTCTTCAGTCATTCCAGCGAAATTGA

mRNA sequence

ATGGAAGGAGAAGGAAAGCTGATGCTGATAACTACAACTCCCATGGCTGCAATTGGAAAACTCGACACTGAAATTCAATTCGATCTTTGCAAATTCGACACCAAATTCGACGCAGCAAAAGCAGCGGAACCGCCGACGACGGAGACCAAAGCCACCGACACCTGCAACGCGATCTGCCAAACACTATCCTCCGGCACCAAATACACACACGAAGGCCCTAATAACAACAGCCCTAAGCTCAGGCTCAGTAGCGCCCCGGGAGTTCCTGGATCTGTCGCCGCCGATAAAATCCCCAATTCCTCAGCCTTCGACAGAAGCCCTAATTTCTCAATCGACGACAGAGACAACCCGGCTTTCTCTGCCGCAGACAGAAGACCGGCCTTCTCCGCCTTGCTCAGTAGCTTCAATTGCTCCACTCTCGTCAGTAGCTTAATCGGCGGGGAAGTCGAGAGCGAGATGCTGGTCCTCGGTCCTTTCTCGCCGAGAGGGAACACCGTGGAGTTTATCTGCACAATGCTGGCTCTTCAGTCATTCCAGCGAAATTGA

Coding sequence (CDS)

ATGGAAGGAGAAGGAAAGCTGATGCTGATAACTACAACTCCCATGGCTGCAATTGGAAAACTCGACACTGAAATTCAATTCGATCTTTGCAAATTCGACACCAAATTCGACGCAGCAAAAGCAGCGGAACCGCCGACGACGGAGACCAAAGCCACCGACACCTGCAACGCGATCTGCCAAACACTATCCTCCGGCACCAAATACACACACGAAGGCCCTAATAACAACAGCCCTAAGCTCAGGCTCAGTAGCGCCCCGGGAGTTCCTGGATCTGTCGCCGCCGATAAAATCCCCAATTCCTCAGCCTTCGACAGAAGCCCTAATTTCTCAATCGACGACAGAGACAACCCGGCTTTCTCTGCCGCAGACAGAAGACCGGCCTTCTCCGCCTTGCTCAGTAGCTTCAATTGCTCCACTCTCGTCAGTAGCTTAATCGGCGGGGAAGTCGAGAGCGAGATGCTGGTCCTCGGTCCTTTCTCGCCGAGAGGGAACACCGTGGAGTTTATCTGCACAATGCTGGCTCTTCAGTCATTCCAGCGAAATTGA

Protein sequence

MEGEGKLMLITTTPMAAIGKLDTEIQFDLCKFDTKFDAAKAAEPPTTETKATDTCNAICQTLSSGTKYTHEGPNNNSPKLRLSSAPGVPGSVAADKIPNSSAFDRSPNFSIDDRDNPAFSAADRRPAFSALLSSFNCSTLVSSLIGGEVESEMLVLGPFSPRGNTVEFICTMLALQSFQRN

Homology

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BLAST of Bhi08G000909 vs. ExPASy TrEMBL
Match: A0A5K1FJ12 (Uncharacterized protein (Fragment) OS=Nymphaea colorata OX=210225 GN=NYM_LOCUS26126 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 3.2e-21
Identity = 60/99 (60.61%), Postives = 72/99 (72.73%), Query Frame = 0


Query: 48  ETKATDTCNAICQTLSSGTKYTHEGPNNNSPKLRLSSAPGVPGSVAADKIPNSSAFDRSP 107
           ET+AT TC  I    SSGTK T  GP ++SP+LRL+ A GVPGSVAAD+ PNSSAF+  P
Sbjct: 2   ETRATTTCTTISSVFSSGTKKTQRGPKSSSPRLRLNRAVGVPGSVAADRTPNSSAFESKP 61

Query: 108 NFSIDDRDNPAFSAADRRPAFSALLSSFNCSTLVSSLIG 147
           +FS  + D+P FSAAD +PAFSALL+S N  TL  SL G
Sbjct: 62  SFSTVESDSPNFSAADSKPAFSALLNSLNSCTLDRSLTG 100

The following BLAST results are available for this feature:

BLAST of Bhi08G000909 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi08G000909 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi08G000909 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5K1FJ12	3.2e-21	60.61	Uncharacterized protein (Fragment) OS=Nymphaea colorata OX=210225 GN=NYM_LOCUS26...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..82
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..85

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi08M000909	Bhi08M000909	mRNA