Bhi08G000879 (gene) Wax gourd (B227) v1

Overview
NameBhi08G000879
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionGTPase IMAP family member 1, putative
Locationchr8: 34359478 .. 34360758 (-)
RNA-Seq ExpressionBhi08G000879
SyntenyBhi08G000879
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTAAAAGTATGATGATTATTAGAAGAGTTATAAGTGGTATCAGTAACATCTTTACACTATTTACAAACTTCTTTACCACTTCAATATTATTCTTTCAATCCCAACCGAATAACGACCTTGAAACAGAAACCCGTCACGAACCGCTGTTGAGGGCGGCAGAGATGGTAATGCAATGGGAGAAAATGATGGTAACATTTTGTGCAGGCTCAGCCATTGCCATAGCCACAGTATCTGTCCAGATTGAAAACAAGTTGTGTGTAATGTTTCATTTGTTGTCAGGTGCTTTGATGGGTTGCTTTGTTTTCACGGCCATAGCCAAAGTCATTATCGTTAAGCAACAAAGGGTTTCTCAAAATTTGTATTGTTTTGGTGGATTTTGGTTTGTGACTGCCTTCTTCATTGCCATTGCCATTCCTTATGCATTTGAGTTTCAGATTATAAGTTTGGTCATCTACCTTCTCTTCTTGATCATCATTTCAATATGCCATTTCTTCTCTTAGTGTCCTTGAACCCCACTTCACAATCTACCTTTCCCCTACCAAATATCTTAAATGTTTTATATTTTGCGTAAATATATATCAATTTATTTGTTTTATTTTCTATAGTTTTACTTTTAATTTAGTTACTATAATCGGTTTACAAGTTTCACTTATGACTACAATTTGTTGACACTTTTCAAACCTCAACGTAAAGTAATTACGATATGTTTTAGTTATAACTAATCCAAATAACCATCTAACTTTATCCATCTTTTTTACAATCTTTGACCATCAAATAAAGGGTAATATAGACATTTTTTTACCATCAATGATTTCTAAAAATCGTTAACTATACACTTTTTGTTGATGCTTTTTGATGGTTAGCAAGACTAAATTACTTTAATTTTAAATATTTTTATAATTAAAAATGAAATAAATAAATAAATAAAAGAAGTGGGGAAGAAAGAAAATCCCTCAATAAATCACCCTAAAAGTAGACATTTTACGATAGTTATTTTACAAGCCAAGTTACTAAGGTCTTGATTAATCCTACACATTTTCACTCAAATGTACCTATGCTCGAAAAATCTGGGACAAGCTTCACAATATTATCCATACAAACTCGAACAACTAGTATTTTCCTATGGAAGTCAAATTTCCAGTTCTTTCTGTACCAATTCTCAAGATCAATATATTGAGTTGGGGTGTGATGAGGGTACTAAAAATGTACCATCCTAAATGAGATGAGTTCCAAGACATTTATTGATCTTTCAGATCACTTGTATTTTTCGAAAAAAACGAC

mRNA sequence

CTAAAAGTATGATGATTATTAGAAGAGTTATAAGTGGTATCAGTAACATCTTTACACTATTTACAAACTTCTTTACCACTTCAATATTATTCTTTCAATCCCAACCGAATAACGACCTTGAAACAGAAACCCGTCACGAACCGCTGTTGAGGGCGGCAGAGATGGTAATGCAATGGGAGAAAATGATGGTAACATTTTGTGCAGGCTCAGCCATTGCCATAGCCACAGTATCTGTCCAGATTGAAAACAAGTTGTGTGTAATGTTTCATTTGTTGTCAGGTGCTTTGATGGGTTGCTTTGTTTTCACGGCCATAGCCAAAGTCATTATCGTTAAGCAACAAAGGGTTTCTCAAAATTTGTATTGTTTTGGTGGATTTTGGTTTGTGACTGCCTTCTTCATTGCCATTGCCATTCCTTATGCATTTGAGTTTCAGATTATAAGTTTGGTCATCTACCTTCTCTTCTTGATCATCATTTCAATATGCCATTTCTTCTCTTAGTGTCCTTGAACCCCACTTCACAATCTACCTTTCCCCTACCAAATATCTTAAATGTTTTATATTTTGCGTAAATATATATCAATTTATTTGTTTTATTTTCTATAGTTTTACTTTTAATTTAGTTACTATAATCGGTTTACAAGTTTCACTTATGACTACAATTTGTTGACACTTTTCAAACCTCAACGTAAAGTAATTACGATATGTTTTAGTTATAACTAATCCAAATAACCATCTAACTTTATCCATCTTTTTTACAATCTTTGACCATCAAATAAAGGGTAATATAGACATTTTTTTACCATCAATGATTTCTAAAAATCGTTAACTATACACTTTTTGTTGATGCTTTTTGATGGTTAGCAAGACTAAATTACTTTAATTTTAAATATTTTTATAATTAAAAATGAAATAAATAAATAAATAAAAGAAGTGGGGAAGAAAGAAAATCCCTCAATAAATCACCCTAAAAGTAGACATTTTACGATAGTTATTTTACAAGCCAAGTTACTAAGGTCTTGATTAATCCTACACATTTTCACTCAAATGTACCTATGCTCGAAAAATCTGGGACAAGCTTCACAATATTATCCATACAAACTCGAACAACTAGTATTTTCCTATGGAAGTCAAATTTCCAGTTCTTTCTGTACCAATTCTCAAGATCAATATATTGAGTTGGGGTGTGATGAGGGTACTAAAAATGTACCATCCTAAATGAGATGAGTTCCAAGACATTTATTGATCTTTCAGATCACTTGTATTTTTCGAAAAAAACGAC

Coding sequence (CDS)

AAAAGTATGATGATTATTAGAAGAGTTATAAGTGGTATCAGTAACATCTTTACACTATTTACAAACTTCTTTACCACTTCAATATTATTCTTTCAATCCCAACCGAATAACGACCTTGAAACAGAAACCCGTCACGAACCGCTGTTGAGGGCGGCAGAGATGGTAATGCAATGGGAGAAAATGATGGTAACATTTTGTGCAGGCTCAGCCATTGCCATAGCCACAGTATCTGTCCAGATTGAAAACAAGTTGTGTGTAATGTTTCATTTGTTGTCAGGTGCTTTGATGGGTTGCTTTGTTTTCACGGCCATAGCCAAAGTCATTATCGTTAAGCAACAAAGGGTTTCTCAAAATTTGTATTGTTTTGGTGGATTTTGGTTTGTGACTGCCTTCTTCATTGCCATTGCCATTCCTTATGCATTTGAGTTTCAGATTATAAGTTTGGTCATCTACCTTCTCTTCTTGATCATCATTTCAATATGCCATTTCTTCTCTTAG

Protein sequence

KSMMIIRRVISGISNIFTLFTNFFTTSILFFQSQPNNDLETETRHEPLLRAAEMVMQWEKMMVTFCAGSAIAIATVSVQIENKLCVMFHLLSGALMGCFVFTAIAKVIIVKQQRVSQNLYCFGGFWFVTAFFIAIAIPYAFEFQIISLVIYLLFLIIISICHFFS
Homology
BLAST of Bhi08G000879 vs. ExPASy TrEMBL
Match: A0A0A0LQB6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G041520 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 1.0e-13
Identity = 58/115 (50.43%), Postives = 72/115 (62.61%), Query Frame = 0

Query: 48  LLRAAEMVMQWEKMMVTFCAGSAIAIATVSVQIE--NKLCVMFHLLSGALMGCFVFTAIA 107
           L   AEMV +W++M+V  C  SAI IATVSVQIE   +L   F  LS  ++ CF F   A
Sbjct: 37  LTMVAEMVEEWKEMIVALCVSSAIGIATVSVQIETNKQLPKTFQFLSIVVLLCFGFVGFA 96

Query: 108 KVIIVKQQRVSQNLYCFGGFWFVTAFFIAIAIPYAFEFQIISLVIYLLFLIIISI 161
           K+     + VS+ LYC GGF  VTAFFIA AIP+A  FQII  ++YLLF  I  +
Sbjct: 97  KMTKPIFKTVSKILYCVGGFLGVTAFFIATAIPFAPYFQIIIFILYLLFCFIFML 151

BLAST of Bhi08G000879 vs. ExPASy TrEMBL
Match: A0A0A0LCY2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G851175 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 4.3e-12
Identity = 53/115 (46.09%), Postives = 74/115 (64.35%), Query Frame = 0

Query: 52  AEMVMQWEKMMVTFCAGSAIAIATVSVQIENKLCVMFHLLSGALMGCFVFTAIAKVIIVK 111
           AEMV + ++M++ FC  SAI IATVSVQ + KL   F  LS A++ CF+    A++I   
Sbjct: 28  AEMVEERKEMIIGFCLSSAIGIATVSVQTKTKLPNSFQFLSIAVLICFLSVGFARMISSI 87

Query: 112 QQRVSQNLYCFGGFWFVTAFFIAIAIPYAFEFQIISLVIY----LLFLIIISICH 163
            + +S+ LYCFGGF   T  FIA AIPY   F II +V+Y    ++F+++ISI H
Sbjct: 88  FKTLSKILYCFGGFLCATCCFIATAIPYDTHFHIIVIVLYSIFCIIFVMLISITH 142

BLAST of Bhi08G000879 vs. ExPASy TrEMBL
Match: A0A0A0LSX4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G040520 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 2.1e-11
Identity = 45/93 (48.39%), Postives = 61/93 (65.59%), Query Frame = 0

Query: 51  AAEMVMQWEKMMVTFCAGSAIAIATVSVQIENKLCVMFHLLSGALMGCFVFTAIAKVIIV 110
           AAEMV +W+ M++ FC  SAI IATVSV I+ +L   F LLS A++ CFV    A++I  
Sbjct: 26  AAEMVEEWKDMIIGFCVSSAIGIATVSVHIKTELPNSFQLLSIAVLLCFVSVVFARMINS 85

Query: 111 KQQRVSQNLYCFGGFWFVTAFFIAIAIPYAFEF 144
             + +S+ LYC GG  + ++ FIA AIPYA  F
Sbjct: 86  IFETLSKILYCVGGLLYASSCFIATAIPYASSF 118

BLAST of Bhi08G000879 vs. ExPASy TrEMBL
Match: A0A7N2R866 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 6.8e-10
Identity = 45/109 (41.28%), Postives = 67/109 (61.47%), Query Frame = 0

Query: 56  MQWEKMMVTFCAGSAIAIATVSVQIENKLCVMFHLLSGALMGCFVFTAIAKVIIVKQQRV 115
           M+W ++++ FC  SA+ IA +SVQ+  +L  +FHL S A++  F    ++K I  K  R 
Sbjct: 80  MEWAEIVIAFCLASAVDIAILSVQVHTQLPALFHLFSLAILLAFASVVVSKFINPKFLRA 139

Query: 116 SQNLYCFGGFWFVTAFFIAIAIPYAFEFQIISLVIYLLFLIIISICHFF 165
           +Q L  FG F+ VTAFFIAI IP+ F  +  S V+Y +  + I IC+ F
Sbjct: 140 AQVLEKFGVFFTVTAFFIAITIPFPFYLKFASWVVYAISALAILICNRF 188

BLAST of Bhi08G000879 vs. ExPASy TrEMBL
Match: A0A7N2M5A3 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 9.2e-07
Identity = 44/106 (41.51%), Postives = 60/106 (56.60%), Query Frame = 0

Query: 56  MQWEKMMVTFCAGSAIAIATVSVQIENKLCVMFHLLSGALMGCFVFTAIAKVIIVKQQRV 115
           M W ++M+ FC  SAI IA VSVQ+  +L   FHLLS A +  F    +++ I  K    
Sbjct: 77  MDWTEIMIGFCLASAIDIALVSVQVHAQLSATFHLLSLAFLFAFACFFVSEFIESKFLVT 136

Query: 116 SQNLYCFGGFWFVTAFFIAIAIPYAFEFQIISLVIYLLFLIIISIC 162
           +Q L   G F+ VTAFFIAIAIP+    +  +  IY + +  I IC
Sbjct: 137 AQVLQKLGVFFTVTAFFIAIAIPFPLYHKFATWAIYTISVFAIFIC 182

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LQB61.0e-1350.43Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G041520 PE=4 SV=1[more]
A0A0A0LCY24.3e-1246.09Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G851175 PE=4 SV=1[more]
A0A0A0LSX42.1e-1148.39Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G040520 PE=4 SV=1[more]
A0A7N2R8666.8e-1041.28Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1[more]
A0A7N2M5A39.2e-0741.51Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34741IMAP FAMILY MEMBER 1, PUTATIVE-RELATEDcoord: 40..164
NoneNo IPR availablePANTHERPTHR34741:SF2IMAP FAMILY MEMBER 1, PUTATIVE-RELATEDcoord: 40..164

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi08M000879Bhi08M000879mRNA