Bhi08G000875 (gene) Wax gourd (B227) v1

Overview


Name	Bhi08G000875
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Ribonucloprotein
Location	chr8: 34134612 .. 34136589 (-)
RNA-Seq Expression	Bhi08G000875
Synteny	Bhi08G000875

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTGGTTTCGCATCCATTCTCACCTTAAACCCTAGTAATAAAGAAGAGAAGAAGCGAAAAACCCAAGCAGACAGCAACCTCCGTCGTCGTCACAAACTCCGGCAGCTCCATTTTCAAGCCTCTCATCGGAAGCAATGGGGAGTGATAGTGAGGCAGAGAAGTCGCATCAAAAGGACAAGAAAAAGGAGAAGAAGAAGCTGTTGGCTCTTGCACCAATTGCCAAACCCCTCGCCGGCAAAAAGCTCTGCAAGCGCACCCTCAAGCTTGTTCGCAAAGGTATACCATCTCTTTTACAAAATCTTTGTGAGTTTTGGAGGTGTTTTTGATTGTATAGTGGAAGTTTGAGATCGAATTAGTGTCACTGTTTTCGTTGTCCTCAATCGATGAATGAAAATGGTTGAATCTGTAAGCTGCTTAGTCAAGTTTGCCTCATTTATTCAATCCTGAGTTGGTGATTTTTCTTCAATTTGATATTAAAGGATAAGCTGTAAATTTCGGTAGACCGCCTAAGGGGATAGATTTCCTTTGAATTGTTTGTTCTTGATAGATTTGGCTTTTCTATTAGATATGAAAACCATTCGTCGCTGTTCTTTCAGCTGCTGAGTATAAGTGCTTGAAGCGGGGAGTAAAGGAGGTTGTCAAAAGCATAAGGCGCGGCCAAAAAGGGTACCTTCTGCTATGAATTTTATCCTACTTTTTGGCTTATAGGGATTTATATGATGCTATGATGCTAAAGATAGAACAATGGAGAAAGAAGGAGGAATTATGGAACATAAATATAATTCCAATAGACTTTTATATACATTGTGATCATTTTTTGATGGATTGAAATCAAAACAAGCCATTTGGAACATCTATACTCGTAATGTAATACATGAAATTCCTTCTACTTTATGGTATTTTTAACTGCTGTCTGTTCCCCTTCATCTTTTGTCCTCTGTAATGCAGACTGTGTGTAATAGCTGGAAACATTTCCCCCATTGACGTGATAACTCATGTTCCAATCTTATGTGAAGAGGCAGATATTCGTTACGTATATGTTCCCTCCAAGGAAGTAAGTGATCATTCATTTTCCTTTCTTTTCAGTATGCTTTGATTGTTTGTTTATTTGTTGATGTAGTACTCGAAAAAGTCTAGGAAGGAAAGAAGTAATGGCTGCATAACTGTTCTTTATACGCTAAGTTACTTGAGTTTGATATTGATTCAATGTAGAGCATAATTAAGTCTAGGAGGTTGACACTAAGTTCCTTAGGATCCTTATAAAAGTTTTCTTAGCCATGATTCACATGATTCTTCGTTCCTTGTGAATATAATAATGACGGGATTTAATCGTGTTTGTTCTTTAGGATCTTGCCAATGCCGGGTCGACCAAGAGGCCAACTTGTTGTGTGCTGGTACAAACTAAGCCAAACAAAGGGGAGCTTGGATCAACTGAACAAGAGAAACTCAAGGCTGACTATGAGCAAGTTGTAGCTGAAGTATCAGAACTTACTAGTACTCTTTTTTGAAAAGTAAAGTTGTTTTTTTTTAACTTCTCTCAATGTACTCTTGTAGCTTTTCTCTTCAAAAACTGGTTAGTGTACTCTGTTTTACTTTCAAATTTGTTTGGTCTTGTGCCATTTCTAGTGCAAATCATCTGGCGTAATATTATATACATACAACTTATTCAACAAAACAAGCGAAGTCTATCAAAAAAAGGGTCCAAATCACCTTTCTGAAGCAATCGACAGTTCAAAGCTAGTGGACAGTATCCGGTGTGTACGGATCTTGTATTTCCATTGAGTTTCTTTTAGTAGCCTTCATGTAAAACCTGTCTACTAATTTTTCTTGTTTTCAAATCTTAATCTGTTCATTAGATTTCTCTTAATTTCTCTAATATATTCGTCAAATTTCTGCTGTTCTAGTAAGCCTTTCGTTGTAGGAC

mRNA sequence

GCTGGTTTCGCATCCATTCTCACCTTAAACCCTAGTAATAAAGAAGAGAAGAAGCGAAAAACCCAAGCAGACAGCAACCTCCGTCGTCGTCACAAACTCCGGCAGCTCCATTTTCAAGCCTCTCATCGGAAGCAATGGGGAGTGATAGTGAGGCAGAGAAGTCGCATCAAAAGGACAAGAAAAAGGAGAAGAAGAAGCTGTTGGCTCTTGCACCAATTGCCAAACCCCTCGCCGGCAAAAAGCTCTGCAAGCGCACCCTCAAGCTTGTTCGCAAAGCTGCTGAGTATAAGTGCTTGAAGCGGGGAGTAAAGGAGGTTGTCAAAAGCATAAGGCGCGGCCAAAAAGGACTGTGTGTAATAGCTGGAAACATTTCCCCCATTGACGTGATAACTCATGTTCCAATCTTATGTGAAGAGGCAGATATTCGTTACGTATATGTTCCCTCCAAGGAAGATCTTGCCAATGCCGGGTCGACCAAGAGGCCAACTTGTTGTGTGCTGGTACAAACTAAGCCAAACAAAGGGGAGCTTGGATCAACTGAACAAGAGAAACTCAAGGCTGACTATGAGCAAGTTGTAGCTGAAGTATCAGAACTTACTAGTACTCTTTTTTGAAAATGCAAATCATCTGGCGTAATATTATATACATACAACTTATTCAACAAAACAAGCGAAGTCTATCAAAAAAAGGGTCCAAATCACCTTTCTGAAGCAATCGACAGTTCAAAGCTAGTGGACAGTATCCGGTGTGTACGGATCTTGTATTTCCATTGAGTTTCTTTTAGTAGCCTTCATGTAAAACCTGTCTACTAATTTTTCTTGTTTTCAAATCTTAATCTGTTCATTAGATTTCTCTTAATTTCTCTAATATATTCGTCAAATTTCTGCTGTTCTAGTAAGCCTTTCGTTGTAGGAC

Coding sequence (CDS)

ATGGGGAGTGATAGTGAGGCAGAGAAGTCGCATCAAAAGGACAAGAAAAAGGAGAAGAAGAAGCTGTTGGCTCTTGCACCAATTGCCAAACCCCTCGCCGGCAAAAAGCTCTGCAAGCGCACCCTCAAGCTTGTTCGCAAAGCTGCTGAGTATAAGTGCTTGAAGCGGGGAGTAAAGGAGGTTGTCAAAAGCATAAGGCGCGGCCAAAAAGGACTGTGTGTAATAGCTGGAAACATTTCCCCCATTGACGTGATAACTCATGTTCCAATCTTATGTGAAGAGGCAGATATTCGTTACGTATATGTTCCCTCCAAGGAAGATCTTGCCAATGCCGGGTCGACCAAGAGGCCAACTTGTTGTGTGCTGGTACAAACTAAGCCAAACAAAGGGGAGCTTGGATCAACTGAACAAGAGAAACTCAAGGCTGACTATGAGCAAGTTGTAGCTGAAGTATCAGAACTTACTAGTACTCTTTTTTGA

Protein sequence

MGSDSEAEKSHQKDKKKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHVPILCEEADIRYVYVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKADYEQVVAEVSELTSTLF

Homology

[Close]

BLAST of Bhi08G000875 vs. TAIR 10
Match: AT5G08180.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 218.0 bits (554), Expect = 5.4e-57
Identity = 117/158 (74.05%), Postives = 132/158 (83.54%), Query Frame = 0


Query: 1   MGSDSEAEKSHQKDKKKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKE 60
           MGSD+EAEKS QK+K   KK  + LAPIAKPLAGKKL KRT KL++KAA  KCLKRGVKE
Sbjct: 1   MGSDTEAEKSIQKEK---KKYAITLAPIAKPLAGKKLQKRTFKLIQKAAGKKCLKRGVKE 60

Query: 61  VVKSIRRGQKGLCVIAGNISPIDVITHVPILCEEADIRYVYVPSKEDLANAGSTKRPTCC 120
           VVKSIRRGQKGLCVIAGNISPIDVITH+PILCEEA + YVYVPSKEDLA AG+TKRPTCC
Sbjct: 61  VVKSIRRGQKGLCVIAGNISPIDVITHLPILCEEAGVPYVYVPSKEDLAQAGATKRPTCC 120

Query: 121 VLVQTKPNKGELGSTEQEKLKADYEQVVAEVSELTSTL 159
           VLV  KP KG+L + E  KLK DYEQV  ++ EL +++
Sbjct: 121 VLVMLKPAKGDLTAEELAKLKTDYEQVSDDIKELATSV 155

[Close]

BLAST of Bhi08G000875 vs. TAIR 10
Match: AT5G08180.2 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 218.0 bits (554), Expect = 5.4e-57
Identity = 117/158 (74.05%), Postives = 132/158 (83.54%), Query Frame = 0


Query: 1   MGSDSEAEKSHQKDKKKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKE 60
           MGSD+EAEKS QK+K   KK  + LAPIAKPLAGKKL KRT KL++KAA  KCLKRGVKE
Sbjct: 1   MGSDTEAEKSIQKEK---KKYAITLAPIAKPLAGKKLQKRTFKLIQKAAGKKCLKRGVKE 60

Query: 61  VVKSIRRGQKGLCVIAGNISPIDVITHVPILCEEADIRYVYVPSKEDLANAGSTKRPTCC 120
           VVKSIRRGQKGLCVIAGNISPIDVITH+PILCEEA + YVYVPSKEDLA AG+TKRPTCC
Sbjct: 61  VVKSIRRGQKGLCVIAGNISPIDVITHLPILCEEAGVPYVYVPSKEDLAQAGATKRPTCC 120

Query: 121 VLVQTKPNKGELGSTEQEKLKADYEQVVAEVSELTSTL 159
           VLV  KP KG+L + E  KLK DYEQV  ++ EL +++
Sbjct: 121 VLVMLKPAKGDLTAEELAKLKTDYEQVSDDIKELATSV 155

[Close]

BLAST of Bhi08G000875 vs. TAIR 10
Match: AT4G12600.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 71.6 bits (174), Expect = 6.3e-13
Identity = 42/128 (32.81%), Postives = 67/128 (52.34%), Query Frame = 0


Query: 27  PIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVIT 86
           P A PLA  +L    L LV++A  YK LK+G  E  K++ RG     V+A +  P++++ 
Sbjct: 8   PKAYPLADSQLSITILDLVQQATNYKQLKKGANEATKTLNRGISEFIVMAADTEPLEILL 67

Query: 87  HVPILCEEADIRYVYVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKADYEQ 146
           H+P+L E+ ++ YV+VPSK+ L  A    RP     V          S E  +LK+  + 
Sbjct: 68  HLPLLAEDKNVPYVFVPSKQALGRACDVTRPVIACSVT---------SNEASQLKSQIQH 126

Query: 147 VVAEVSEL 155
           +   + +L
Sbjct: 128 LKDAIEKL 126

[Close]

BLAST of Bhi08G000875 vs. TAIR 10
Match: AT5G20160.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 71.6 bits (174), Expect = 6.3e-13
Identity = 42/128 (32.81%), Postives = 67/128 (52.34%), Query Frame = 0


Query: 27  PIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVIT 86
           P A PLA  +L    L LV++A  YK LK+G  E  K++ RG     V+A +  P++++ 
Sbjct: 8   PKAYPLADSQLSITILDLVQQATNYKQLKKGANEATKTLNRGISEFVVMAADAEPLEILL 67

Query: 87  HVPILCEEADIRYVYVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKADYEQ 146
           H+P+L E+ ++ YV+VPSK+ L  A    RP     V          S E  +LK+  + 
Sbjct: 68  HLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVT---------SNEASQLKSQIQH 126

Query: 147 VVAEVSEL 155
           +   + +L
Sbjct: 128 LKDAIEKL 126

[Close]

BLAST of Bhi08G000875 vs. TAIR 10
Match: AT4G22380.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 70.9 bits (172), Expect = 1.1e-12
Identity = 41/128 (32.03%), Postives = 67/128 (52.34%), Query Frame = 0


Query: 27  PIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVIT 86
           P A PLA  +L    + LV++A  YK LK+G  E  K++ RG     V+A +  P++++ 
Sbjct: 8   PKAYPLADSQLSITIMDLVQQATNYKQLKKGANEATKTLNRGISEFVVMAADAEPLEILL 67

Query: 87  HVPILCEEADIRYVYVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKADYEQ 146
           H+P+L E+ ++ YV+VPSK+ L  A    RP     V          S E  +LK+  + 
Sbjct: 68  HLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVT---------SNEASQLKSQIQH 126

Query: 147 VVAEVSEL 155
           +   + +L
Sbjct: 128 LKDAIEKL 126

[Close]

BLAST of Bhi08G000875 vs. ExPASy Swiss-Prot
Match: Q9LEY9 (H/ACA ribonucleoprotein complex subunit 2-like protein OS=Arabidopsis thaliana OX=3702 GN=At5g08180 PE=1 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 7.6e-56
Identity = 117/158 (74.05%), Postives = 132/158 (83.54%), Query Frame = 0


Query: 1   MGSDSEAEKSHQKDKKKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKE 60
           MGSD+EAEKS QK+K   KK  + LAPIAKPLAGKKL KRT KL++KAA  KCLKRGVKE
Sbjct: 1   MGSDTEAEKSIQKEK---KKYAITLAPIAKPLAGKKLQKRTFKLIQKAAGKKCLKRGVKE 60

Query: 61  VVKSIRRGQKGLCVIAGNISPIDVITHVPILCEEADIRYVYVPSKEDLANAGSTKRPTCC 120
           VVKSIRRGQKGLCVIAGNISPIDVITH+PILCEEA + YVYVPSKEDLA AG+TKRPTCC
Sbjct: 61  VVKSIRRGQKGLCVIAGNISPIDVITHLPILCEEAGVPYVYVPSKEDLAQAGATKRPTCC 120

Query: 121 VLVQTKPNKGELGSTEQEKLKADYEQVVAEVSELTSTL 159
           VLV  KP KG+L + E  KLK DYEQV  ++ EL +++
Sbjct: 121 VLVMLKPAKGDLTAEELAKLKTDYEQVSDDIKELATSV 155

[Close]

BLAST of Bhi08G000875 vs. ExPASy Swiss-Prot
Match: P32495 (H/ACA ribonucleoprotein complex subunit NHP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=NHP2 PE=1 SV=2)

HSP 1 Score: 142.1 bits (357), Expect = 5.3e-33
Identity = 75/156 (48.08%), Postives = 111/156 (71.15%), Query Frame = 0


Query: 1   MGSDSEAEKSHQKDKKKE--KKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGV 60
           MG D++  K  ++ K  +  + ++ A+ P AKPLA KKL K+ LK V+KA++ K +KRGV
Sbjct: 1   MGKDNKEHKESKESKTVDNYEARMPAVLPFAKPLASKKLNKKVLKTVKKASKAKNVKRGV 60

Query: 61  KEVVKSIRRGQKGLCVIAGNISPIDVITHVPILCEEADIRYVYVPSKEDLANAGSTKRPT 120
           KEVVK++R+G+KGL VIAG+ISP DVI+H+P+LCE+  + Y+++PSK+DL  AG+TKRPT
Sbjct: 61  KEVVKALRKGEKGLVVIAGDISPADVISHIPVLCEDHSVPYIFIPSKQDLGAAGATKRPT 120

Query: 121 CCVLVQTKPNKGELGSTEQEKLKADYEQVVAEVSEL 155
             V +    NK + G  ++E+ K  + +VV EV  L
Sbjct: 121 SVVFIVPGSNKKKDGKNKEEEYKESFNEVVKEVQAL 156

[Close]

BLAST of Bhi08G000875 vs. ExPASy Swiss-Prot
Match: Q9P7H0 (H/ACA ribonucleoprotein complex subunit nhp2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=nhp2 PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 6.1e-29
Identity = 70/154 (45.45%), Postives = 103/154 (66.88%), Query Frame = 0


Query: 1   MGSDSEAEKSHQKDKKKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKE 60
           M  D +  K     + +    L AL PIAKPLA KKL K+ +K V+KA++ K + RGVKE
Sbjct: 1   MAKDKKDHKHSGSTEDEYDSYLPALMPIAKPLAPKKLNKKMMKTVKKASKQKHILRGVKE 60

Query: 61  VVKSIRRGQKGLCVIAGNISPIDVITHVPILCEEADIRYVYVPSKEDLANAGSTKRPTCC 120
           VVK++R+G+KGL ++AG+ISP+DVI+H+P+LCE+ ++ Y+Y  SKE L  A +TKRPT C
Sbjct: 61  VVKAVRKGEKGLVILAGDISPMDVISHIPVLCEDNNVPYLYTVSKELLGEASNTKRPTSC 120

Query: 121 VLVQTKPNKGELGSTEQEKLKADYEQVVAEVSEL 155
           V++     K ++   E+   K  YE+++ EV  L
Sbjct: 121 VMIVPGGKKKDMSKVEE--YKESYEEIIKEVPAL 152

[Close]

BLAST of Bhi08G000875 vs. ExPASy Swiss-Prot
Match: Q6P8C4 (H/ACA ribonucleoprotein complex subunit 2-like protein OS=Xenopus tropicalis OX=8364 GN=nhp2 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 7.7e-24
Identity = 58/119 (48.74%), Postives = 82/119 (68.91%), Query Frame = 0


Query: 6   EAEKSHQKDKKKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSI 65
           E+E+  +   K   + L  L PIAKPLAG+KL K+  K V+KA + K ++RGVKEV K I
Sbjct: 8   ESEEVPETPSKSYDELLAYLNPIAKPLAGRKLTKKLYKCVKKAIKQKNIRRGVKEVQKFI 67

Query: 66  RRGQKGLCVIAGNISPIDVITHVPILCEEADIRYVYVPSKEDLANAGSTKRPTCCVLVQ 125
            +G+KG+ V+AG+  PI+V  H+P++CE+  I Y YVPSK DL  A  +KRPTC +L++
Sbjct: 68  NKGEKGIVVMAGDTLPIEVYCHIPVMCEDRGIPYSYVPSKSDLGAAAGSKRPTCVILIK 126

[Close]

BLAST of Bhi08G000875 vs. ExPASy Swiss-Prot
Match: Q8I7X7 (H/ACA ribonucleoprotein complex subunit 2-like protein OS=Branchiostoma belcheri OX=7741 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.3e-23
Identity = 60/153 (39.22%), Postives = 101/153 (66.01%), Query Frame = 0


Query: 4   DSEAEKSHQKDKKKEKKKLLA--LAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEV 63
           +   E    K+ ++   ++LA  + PIA PLA +KL KR  K V+KA++ K +++G+++V
Sbjct: 14  EEHEESGGNKEDRERAYEVLATRVNPIASPLAARKLTKRLYKTVKKASKEKNIRKGIRDV 73

Query: 64  VKSIRRGQKGLCVIAGNISPIDVITHVPILCEEADIRYVYVPSKEDLANAGSTKRPTCCV 123
            K I++G++G+ +IAG+ +PI+V  H+P++CE+A I Y YVP+K+DL  A  +KRPTCCV
Sbjct: 74  QKFIKKGERGIVLIAGDTTPIEVYCHLPVVCEDAKIPYCYVPAKQDLGEAAGSKRPTCCV 133

Query: 124 LVQTKPNKGELGSTEQEKLKADYEQVVAEVSEL 155
           L+  KPN         E  ++ Y++ + +V+ L
Sbjct: 134 LL--KPN---------ESYQSSYDECLTDVTTL 155

[Close]

BLAST of Bhi08G000875 vs. ExPASy TrEMBL
Match: A0A5D3BKS6 (Ribonucloprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G001680 PE=3 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 1.8e-76
Identity = 154/159 (96.86%), Postives = 158/159 (99.37%), Query Frame = 0


Query: 1   MGSDSEAEKSHQKDKKKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKE 60
           MGSDSEAEKS QKDK+KEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKE
Sbjct: 1   MGSDSEAEKSRQKDKEKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKE 60

Query: 61  VVKSIRRGQKGLCVIAGNISPIDVITHVPILCEEADIRYVYVPSKEDLANAGSTKRPTCC 120
           VVKSIRRGQKGLCVIAGNISPIDVITHVPILCEE+DIRYVYVPSKEDLANAGSTKRPTCC
Sbjct: 61  VVKSIRRGQKGLCVIAGNISPIDVITHVPILCEESDIRYVYVPSKEDLANAGSTKRPTCC 120

Query: 121 VLVQTKPNKGELGSTEQEKLKADYEQVVAEVSELTSTLF 160
           VLVQTKPNKGELGSTEQEKLKAD++QVVAEVSELTSTLF
Sbjct: 121 VLVQTKPNKGELGSTEQEKLKADFDQVVAEVSELTSTLF 159

[Close]

BLAST of Bhi08G000875 vs. ExPASy TrEMBL
Match: A0A1S3C0C8 (Ribonucloprotein OS=Cucumis melo OX=3656 GN=LOC103495169 PE=3 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 1.8e-76
Identity = 154/159 (96.86%), Postives = 158/159 (99.37%), Query Frame = 0


Query: 1   MGSDSEAEKSHQKDKKKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKE 60
           MGSDSEAEKS QKDK+KEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKE
Sbjct: 1   MGSDSEAEKSRQKDKEKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKE 60

Query: 61  VVKSIRRGQKGLCVIAGNISPIDVITHVPILCEEADIRYVYVPSKEDLANAGSTKRPTCC 120
           VVKSIRRGQKGLCVIAGNISPIDVITHVPILCEE+DIRYVYVPSKEDLANAGSTKRPTCC
Sbjct: 61  VVKSIRRGQKGLCVIAGNISPIDVITHVPILCEESDIRYVYVPSKEDLANAGSTKRPTCC 120

Query: 121 VLVQTKPNKGELGSTEQEKLKADYEQVVAEVSELTSTLF 160
           VLVQTKPNKGELGSTEQEKLKAD++QVVAEVSELTSTLF
Sbjct: 121 VLVQTKPNKGELGSTEQEKLKADFDQVVAEVSELTSTLF 159

[Close]

BLAST of Bhi08G000875 vs. ExPASy TrEMBL
Match: A0A6J1GTK9 (Ribonucloprotein OS=Cucurbita moschata OX=3662 GN=LOC111457314 PE=3 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 7.6e-75
Identity = 149/159 (93.71%), Postives = 157/159 (98.74%), Query Frame = 0


Query: 1   MGSDSEAEKSHQKDKKKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKE 60
           MGSDSEAEKSH KDK+KEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKE
Sbjct: 1   MGSDSEAEKSHLKDKEKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKE 60

Query: 61  VVKSIRRGQKGLCVIAGNISPIDVITHVPILCEEADIRYVYVPSKEDLANAGSTKRPTCC 120
           VVKSIRRGQKG CVIAGNISPIDVITHVPILCEEADIRYVYVPSKEDLANAGSTKRPTCC
Sbjct: 61  VVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYVYVPSKEDLANAGSTKRPTCC 120

Query: 121 VLVQTKPNKGELGSTEQEKLKADYEQVVAEVSELTSTLF 160
           VL+QTKPNKGELGSTEQEKLKA+++QVV+EVSELTS++F
Sbjct: 121 VLIQTKPNKGELGSTEQEKLKAEFDQVVSEVSELTSSIF 159

[Close]

BLAST of Bhi08G000875 vs. ExPASy TrEMBL
Match: A0A6J1E880 (Ribonucloprotein OS=Cucurbita moschata OX=3662 GN=LOC111431634 PE=3 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 2.9e-74
Identity = 150/159 (94.34%), Postives = 156/159 (98.11%), Query Frame = 0


Query: 1   MGSDSEAEKSHQKDKKKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKE 60
           MGSDSEAEKSH+KDK+KEKKKL ALAPIAKPLAGKKLCK TLKLVRKAAE+KCLKRGVKE
Sbjct: 1   MGSDSEAEKSHKKDKEKEKKKLSALAPIAKPLAGKKLCKLTLKLVRKAAEHKCLKRGVKE 60

Query: 61  VVKSIRRGQKGLCVIAGNISPIDVITHVPILCEEADIRYVYVPSKEDLANAGSTKRPTCC 120
           VVKSIRRGQKGLCVIAGNISPIDVITHVPILCEEADIRY+YVPSKEDLA+AGSTKRPTCC
Sbjct: 61  VVKSIRRGQKGLCVIAGNISPIDVITHVPILCEEADIRYLYVPSKEDLASAGSTKRPTCC 120

Query: 121 VLVQTKPNKGELGSTEQEKLKADYEQVVAEVSELTSTLF 160
           VLVQTKPNKGELGSTEQEKLKADY+QVVAEVSE TSTLF
Sbjct: 121 VLVQTKPNKGELGSTEQEKLKADYDQVVAEVSEFTSTLF 159

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BLAST of Bhi08G000875 vs. ExPASy TrEMBL
Match: A0A6J1K350 (Ribonucloprotein OS=Cucurbita maxima OX=3661 GN=LOC111490234 PE=3 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 3.8e-74
Identity = 149/159 (93.71%), Postives = 156/159 (98.11%), Query Frame = 0


Query: 1   MGSDSEAEKSHQKDKKKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKE 60
           M SDSEAEKSH KDK+KEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKE
Sbjct: 1   MVSDSEAEKSHLKDKEKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKE 60

Query: 61  VVKSIRRGQKGLCVIAGNISPIDVITHVPILCEEADIRYVYVPSKEDLANAGSTKRPTCC 120
           VVKSIRRGQKG CVIAGNISPIDVITHVPILCEEADIRYVYVPSKEDLANAGSTKRPTCC
Sbjct: 61  VVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYVYVPSKEDLANAGSTKRPTCC 120

Query: 121 VLVQTKPNKGELGSTEQEKLKADYEQVVAEVSELTSTLF 160
           VL+QTKPNKGELGSTEQEKLKA+++QVVAEVSELTS++F
Sbjct: 121 VLIQTKPNKGELGSTEQEKLKAEFDQVVAEVSELTSSIF 159

The following BLAST results are available for this feature:

BLAST of Bhi08G000875 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G08180.1	5.4e-57	74.05	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	[more]
AT5G08180.2	5.4e-57	74.05	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	[more]
AT4G12600.1	6.3e-13	32.81	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	[more]
AT5G20160.1	6.3e-13	32.81	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	[more]
AT4G22380.1	1.1e-12	32.03	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	[more]

BLAST of Bhi08G000875 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LEY9	7.6e-56	74.05	H/ACA ribonucleoprotein complex subunit 2-like protein OS=Arabidopsis thaliana O...	[more]
P32495	5.3e-33	48.08	H/ACA ribonucleoprotein complex subunit NHP2 OS=Saccharomyces cerevisiae (strain...	[more]
Q9P7H0	6.1e-29	45.45	H/ACA ribonucleoprotein complex subunit nhp2 OS=Schizosaccharomyces pombe (strai...	[more]
Q6P8C4	7.7e-24	48.74	H/ACA ribonucleoprotein complex subunit 2-like protein OS=Xenopus tropicalis OX=...	[more]
Q8I7X7	1.3e-23	39.22	H/ACA ribonucleoprotein complex subunit 2-like protein OS=Branchiostoma belcheri...	[more]

BLAST of Bhi08G000875 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BKS6	1.8e-76	96.86	Ribonucloprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G001...	[more]
A0A1S3C0C8	1.8e-76	96.86	Ribonucloprotein OS=Cucumis melo OX=3656 GN=LOC103495169 PE=3 SV=1	[more]
A0A6J1GTK9	7.6e-75	93.71	Ribonucloprotein OS=Cucurbita moschata OX=3662 GN=LOC111457314 PE=3 SV=1	[more]
A0A6J1E880	2.9e-74	94.34	Ribonucloprotein OS=Cucurbita moschata OX=3662 GN=LOC111431634 PE=3 SV=1	[more]
A0A6J1K350	3.8e-74	93.71	Ribonucloprotein OS=Cucurbita maxima OX=3661 GN=LOC111490234 PE=3 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018492	Ribosomal protein L7Ae/L8/Nhp2 family	PRINTS	PR00881	L7ARS6FAMILY	coord: 54..68 score: 36.97 coord: 73..86 score: 29.87 coord: 89..99 score: 42.98 coord: 99..113 score: 36.06
IPR002415	H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote	PRINTS	PR00883	NUCLEARHMG	coord: 101..113 score: 43.08 coord: 40..55 score: 41.25 coord: 57..67 score: 43.64 coord: 27..40 score: 50.0
IPR029064	50S ribosomal protein L30e-like	GENE3D	3.30.1330.30		coord: 19..155 e-value: 8.5E-49 score: 166.4
IPR029064	50S ribosomal protein L30e-like	SUPERFAMILY	55315	L30e-like	coord: 20..134
IPR004038	Ribosomal protein L7Ae/L30e/S12e/Gadd45	PFAM	PF01248	Ribosomal_L7Ae	coord: 42..126 e-value: 2.1E-23 score: 81.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR23105	RIBOSOMAL PROTEIN L7AE FAMILY MEMBER	coord: 2..157
None	No IPR available	PANTHER	PTHR23105:SF146	SUBFAMILY NOT NAMED	coord: 2..157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi08M000875	Bhi08M000875	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000469	cleavage involved in rRNA processing
biological_process	GO:0000470	maturation of LSU-rRNA
biological_process	GO:0031118	rRNA pseudouridine synthesis
biological_process	GO:0031120	snRNA pseudouridine synthesis
cellular_component	GO:0031429	box H/ACA snoRNP complex
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0034513	box H/ACA snoRNA binding
molecular_function	GO:0003723	RNA binding