Bhi08G000592 (gene) Wax gourd (B227) v1

Overview


Name	Bhi08G000592
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Spindle pole body component protein
Location	chr8: 23271181 .. 23271864 (+)
RNA-Seq Expression	Bhi08G000592
Synteny	Bhi08G000592

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAAACGTGAACGAATCAGATAAACCTTAGCTTCGACGGTGCTGAAAATAGAGCTTGAACGGTTCTTCCGATCTTTGACCTCAGCTGCAACCCCATTTCCTTCTTTCTTCCGATCACCTCTTCAATCTGCTCGCCTCCTTCAGACATGTAAATCCTCTCCGGCCACATTCACACTCTCCTAAGAATGGGGAGGGACATTTACCGGAATTCTACGACGGACGACGGAGCGAAAAATGGACTTCTGCTGTATCAGTCAATGAGTTTCGTTCTGACCATTCTTCTTCCACCGAGAGACTCACCGGGGCGGTTAATTTCCTGATGAAATTCCTTTTCGAGTTTGTTTCTTGCTGCGTGCCGGTGAACATGTCACGCATAGAGAATCCGGAGGAAACGGAGGCGCCAGGCGTCAAGGAGGTGAGATCTCTAGCTCCGATTACCACCAGAAAACATCAGCGGAGAAAACAAAGTGCGTTGTTGCCTTTAGCGGCGAAGAAGCCATCGCTGAGAGCGATCTCGGAGGATAAGGTAGTCCTGGTAGTGATGGGTGAAGCCATTGCCGAAATAGGCCTCACAAGAATTGGGAGGGACAATGGAGTGAGACCAAGGGAGATAAGAAGGCAAGATGGGCTAGGGCTTGGAAGAATGTGGGTTTTCCGGGAAGGGGAAGCGTTTTTCGGAAGT

mRNA sequence

ATGAAAAACCTGCAACCCCATTTCCTTCTTTCTTCCGATCACCTCTTCAATCTGCTCGCCTCCTTCAGACATGTAAATCCTCTCCGGCCACATTCACACTCTCCTAAGAATGGGGAGGGACATTTACCGGAATTCTACGACGGACGACGGAGCGAAAAATGGACTTCTGCTGTATCAGTCAATGAGTTTCGTTCTGACCATTCTTCTTCCACCGAGAGACTCACCGGGGCGGTTAATTTCCTGATGAAATTCCTTTTCGAGTTTGTTTCTTGCTGCGTGCCGGTGAACATGTCACGCATAGAGAATCCGGAGGAAACGGAGGCGCCAGGCGTCAAGGAGGTGAGATCTCTAGCTCCGATTACCACCAGAAAACATCAGCGGAGAAAACAAAGTGCGTTGTTGCCTTTAGCGGCGAAGAAGCCATCGCTGAGAGCGATCTCGGAGGATAAGGTAGTCCTGGTAGTGATGGGTGAAGCCATTGCCGAAATAGGCCTCACAAGAATTGGGAGGGACAATGGAGTGAGACCAAGGGAGATAAGAAGGCAAGATGGGCTAGGGCTTGGAAGAATGTGGGTTTTCCGGGAAGGGGAAGCGTTTTTCGGAAGT

Coding sequence (CDS)

ATGAAAAACCTGCAACCCCATTTCCTTCTTTCTTCCGATCACCTCTTCAATCTGCTCGCCTCCTTCAGACATGTAAATCCTCTCCGGCCACATTCACACTCTCCTAAGAATGGGGAGGGACATTTACCGGAATTCTACGACGGACGACGGAGCGAAAAATGGACTTCTGCTGTATCAGTCAATGAGTTTCGTTCTGACCATTCTTCTTCCACCGAGAGACTCACCGGGGCGGTTAATTTCCTGATGAAATTCCTTTTCGAGTTTGTTTCTTGCTGCGTGCCGGTGAACATGTCACGCATAGAGAATCCGGAGGAAACGGAGGCGCCAGGCGTCAAGGAGGTGAGATCTCTAGCTCCGATTACCACCAGAAAACATCAGCGGAGAAAACAAAGTGCGTTGTTGCCTTTAGCGGCGAAGAAGCCATCGCTGAGAGCGATCTCGGAGGATAAGGTAGTCCTGGTAGTGATGGGTGAAGCCATTGCCGAAATAGGCCTCACAAGAATTGGGAGGGACAATGGAGTGAGACCAAGGGAGATAAGAAGGCAAGATGGGCTAGGGCTTGGAAGAATGTGGGTTTTCCGGGAAGGGGAAGCGTTTTTCGGAAGT

Protein sequence

MKNLQPHFLLSSDHLFNLLASFRHVNPLRPHSHSPKNGEGHLPEFYDGRRSEKWTSAVSVNEFRSDHSSSTERLTGAVNFLMKFLFEFVSCCVPVNMSRIENPEETEAPGVKEVRSLAPITTRKHQRRKQSALLPLAAKKPSLRAISEDKVVLVVMGEAIAEIGLTRIGRDNGVRPREIRRQDGLGLGRMWVFREGEAFFGS

Homology

[Close]

BLAST of Bhi08G000592 vs. ExPASy TrEMBL
Match: A0A0A0L6G1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G094500 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 1.3e-23
Identity = 72/113 (63.72%), Postives = 81/113 (71.68%), Query Frame = 0


Query: 82  MKFLFEFVSCCVPVNMSRIENPEETEAPGVKEVRSLAPITTRKHQRRKQSALLPLAAK-- 141
           MKFLFEFVSCCVPVNMSRI+NPEETEA G KE+RSL PITTRKH+RRK+SALLP AA   
Sbjct: 1   MKFLFEFVSCCVPVNMSRIDNPEETEAAGSKEMRSLPPITTRKHRRRKRSALLPSAAAKL 60

Query: 142 ----KPSLRAISEDKVVLVVMGEAIAEIGLTRIGRDNGVRPREIRRQDGLGLG 189
               KPSL AISEDKVVLVVM    ++   T + R      R+ R +DG   G
Sbjct: 61  AADWKPSLGAISEDKVVLVVMEREKSDEQTTELERS---VKRKSRSRDGESRG 110

[Close]

BLAST of Bhi08G000592 vs. ExPASy TrEMBL
Match: A0A1S3BTM8 (uncharacterized protein LOC103493394 OS=Cucumis melo OX=3656 GN=LOC103493394 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 3.9e-23
Identity = 65/81 (80.25%), Postives = 69/81 (85.19%), Query Frame = 0


Query: 82  MKFLFEFVSCCVPVNMSRIENPEETEAPGVKEVRSLAPITTRKHQRRKQSALLPLAAK-- 141
           MKFLFEFVSCCVPVNMSRIENPEETEA   KE+R+LAPITTRKH+RRK+SALLP AA   
Sbjct: 1   MKFLFEFVSCCVPVNMSRIENPEETEAAASKEMRTLAPITTRKHRRRKRSALLPSAAAKL 60

Query: 142 ----KPSLRAISEDKVVLVVM 157
               KPSL AISEDKVVLVVM
Sbjct: 61  AADWKPSLGAISEDKVVLVVM 81

[Close]

BLAST of Bhi08G000592 vs. ExPASy TrEMBL
Match: A0A6J1EVT0 (uncharacterized protein LOC111438455 OS=Cucurbita moschata OX=3662 GN=LOC111438455 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 8.6e-23
Identity = 62/79 (78.48%), Postives = 69/79 (87.34%), Query Frame = 0


Query: 82  MKFLFEFVSCCVPVNMSRIENPEETEAPGVKEVRSLAPITTRKHQRRKQSALLPLAAK-- 141
           MKFLFEFVSCCVPVNMSR+ENPE T APGV+E++SLAPITTRKH+RRK+ ALLP AAK  
Sbjct: 1   MKFLFEFVSCCVPVNMSRLENPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLA 60

Query: 142 ---KPSLRAISEDKVVLVV 156
              KPSL AISEDKVVLV+
Sbjct: 61  ADWKPSLGAISEDKVVLVL 79

[Close]

BLAST of Bhi08G000592 vs. ExPASy TrEMBL
Match: A0A6J1JD62 (uncharacterized protein LOC111483313 OS=Cucurbita maxima OX=3661 GN=LOC111483313 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 3.3e-22
Identity = 69/112 (61.61%), Postives = 81/112 (72.32%), Query Frame = 0


Query: 82  MKFLFEFVSCCVPVNMSRIENPEETEAPGVKEVRSLAPITTRKHQRRKQSALLPLAAK-- 141
           MKFLFEFVSCCVPVNMSR+ENPE T APGV+E++SLAPI TRKH+RRK+ ALLP AAK  
Sbjct: 1   MKFLFEFVSCCVPVNMSRLENPEATAAPGVEEMKSLAPIATRKHRRRKRGALLPSAAKLA 60

Query: 142 ---KPSLRAISEDKVVLVVMGEAIAE---IGLTR-IGRDNGVRPREIRRQDG 185
              KPSL AISEDKVVLV+     ++    G  R + R +G R  E R  +G
Sbjct: 61  ADWKPSLGAISEDKVVLVLREREKSDDQTAGSERSVKRKSGSRDGEARGVNG 112

[Close]

BLAST of Bhi08G000592 vs. ExPASy TrEMBL
Match: A0A6J1FP47 (uncharacterized protein LOC111447225 OS=Cucurbita moschata OX=3662 GN=LOC111447225 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 3.7e-18
Identity = 56/80 (70.00%), Postives = 64/80 (80.00%), Query Frame = 0


Query: 82  MKFLFEFVSCCVPVNMSRIENPEETEAPGVKEVRSLAPITTRKHQRRKQSALLPLAAK-- 141
           MKFL EFVSCCVPV++SR+ENPE TEAPG +E+RSLAPITTR H+RR++ AL   AAK  
Sbjct: 1   MKFLPEFVSCCVPVSVSRMENPEATEAPGAEEIRSLAPITTRIHRRRRRGALYTSAAKMA 60

Query: 142 ---KPSLRAISEDKVVLVVM 157
               PSL AISED VVLVVM
Sbjct: 61  GDWTPSLGAISEDNVVLVVM 80

The following BLAST results are available for this feature:

BLAST of Bhi08G000592 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi08G000592 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi08G000592 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6G1	1.3e-23	63.72	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G094500 PE=4 SV=1	[more]
A0A1S3BTM8	3.9e-23	80.25	uncharacterized protein LOC103493394 OS=Cucumis melo OX=3656 GN=LOC103493394 PE=...	[more]
A0A6J1EVT0	8.6e-23	78.48	uncharacterized protein LOC111438455 OS=Cucurbita moschata OX=3662 GN=LOC1114384...	[more]
A0A6J1JD62	3.3e-22	61.61	uncharacterized protein LOC111483313 OS=Cucurbita maxima OX=3661 GN=LOC111483313...	[more]
A0A6J1FP47	3.7e-18	70.00	uncharacterized protein LOC111447225 OS=Cucurbita moschata OX=3662 GN=LOC1114472...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35318:SF2	BNAA10G08410D PROTEIN	coord: 82..157
None	No IPR available	PANTHER	PTHR35318	BNAA10G08410D PROTEIN	coord: 82..157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi08M000592	Bhi08M000592	mRNA