Bhi08G000465 (gene) Wax gourd (B227) v1

Overview


Name	Bhi08G000465
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	ATP synthase subunit beta, chloroplastic
Location	chr8: 18644912 .. 18645277 (+)
RNA-Seq Expression	Bhi08G000465
Synteny	Bhi08G000465

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTGTCTACCCCTATGAGGAAAGCCAGGAAACAGGAATTAAAGTAGAAGATCTTTTAGCCCCTTATCGACGTGGAGGAAAAATAGGACTATTCGGAGGGGCTGGAGTGGGTAAAACAGTACTCATTATGGAATTGATCAACAACATTGCCAAAGCTCATGGAGGTGTATTCGTATTTGGAGGAGTAGATGAACGTACTCGTTCAGGAAATGATCTTTACATGGAAATGAAAGAATCTGGAGTAATTAATGAAGAAAATCTTGCAGAATCAAAAGTGGCTCTAGTCTACGGTCAGATGAATGAACTGTGGGGAGCTCGTATGAGAGTTGGTTCAACTGCCCTAACTATGGCGGAATATTTCTAA

mRNA sequence

ATGCCTGTCTACCCCTATGAGGAAAGCCAGGAAACAGGAATTAAAGTAGAAGATCTTTTAGCCCCTTATCGACGTGGAGGAAAAATAGGACTATTCGGAGGGGCTGGAGTGGGTAAAACAGTACTCATTATGGAATTGATCAACAACATTGCCAAAGCTCATGGAGGTGTATTCGTATTTGGAGGAGTAGATGAACGTACTCGTTCAGGAAATGATCTTTACATGGAAATGAAAGAATCTGGAGTAATTAATGAAGAAAATCTTGCAGAATCAAAAGTGGCTCTAGTCTACGGTCAGATGAATGAACTGTGGGGAGCTCGTATGAGAGTTGGTTCAACTGCCCTAACTATGGCGGAATATTTCTAA

Coding sequence (CDS)

ATGCCTGTCTACCCCTATGAGGAAAGCCAGGAAACAGGAATTAAAGTAGAAGATCTTTTAGCCCCTTATCGACGTGGAGGAAAAATAGGACTATTCGGAGGGGCTGGAGTGGGTAAAACAGTACTCATTATGGAATTGATCAACAACATTGCCAAAGCTCATGGAGGTGTATTCGTATTTGGAGGAGTAGATGAACGTACTCGTTCAGGAAATGATCTTTACATGGAAATGAAAGAATCTGGAGTAATTAATGAAGAAAATCTTGCAGAATCAAAAGTGGCTCTAGTCTACGGTCAGATGAATGAACTGTGGGGAGCTCGTATGAGAGTTGGTTCAACTGCCCTAACTATGGCGGAATATTTCTAA

Protein sequence

MPVYPYEESQETGIKVEDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVFVFGGVDERTRSGNDLYMEMKESGVINEENLAESKVALVYGQMNELWGARMRVGSTALTMAEYF

Homology

[Close]

BLAST of Bhi08G000465 vs. TAIR 10
Match: ATCG00480.1 (ATP synthase subunit beta )

HSP 1 Score: 200.7 bits (509), Expect = 6.8e-52
Identity = 103/111 (92.79%), Postives = 104/111 (93.69%), Query Frame = 0


Query: 11  ETGIKVEDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVFVFGGVDERTRSG 70
           ETGIKV DLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV VFGGV ERTR G
Sbjct: 150 ETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREG 209

Query: 71  NDLYMEMKESGVINEENLAESKVALVYGQMNELWGARMRVGSTALTMAEYF 122
           NDLYMEMKESGVINE+NLAESKVALVYGQMNE  GARMRVG TALTMAEYF
Sbjct: 210 NDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYF 260

[Close]

BLAST of Bhi08G000465 vs. TAIR 10
Match: AT5G08670.1 (ATP synthase alpha/beta family protein )

HSP 1 Score: 166.8 bits (421), Expect = 1.1e-41
Identity = 89/116 (76.72%), Postives = 94/116 (81.03%), Query Frame = 0


Query: 7   EESQETGIKVEDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVFVFGGVDER 66
           +E   TGIKV DLLAPY+RGGKIGLFGGAGVGKTVLIMELINN+AKAHGG  VF GV ER
Sbjct: 205 QEILATGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGER 264

Query: 67  TRSGNDLYMEMKESGVIN-EENLAESKVALVYGQMNELWGARMRVGSTALTMAEYF 122
           TR GNDLY EM ESGVI   E  +ESK ALVYGQMNE  GAR RVG T LT+AEYF
Sbjct: 265 TREGNDLYREMIESGVIKLGEKQSESKCALVYGQMNEPPGARARVGLTGLTVAEYF 320

[Close]

BLAST of Bhi08G000465 vs. TAIR 10
Match: AT5G08680.1 (ATP synthase alpha/beta family protein )

HSP 1 Score: 166.8 bits (421), Expect = 1.1e-41
Identity = 89/116 (76.72%), Postives = 94/116 (81.03%), Query Frame = 0


Query: 7   EESQETGIKVEDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVFVFGGVDER 66
           +E   TGIKV DLLAPY+RGGKIGLFGGAGVGKTVLIMELINN+AKAHGG  VF GV ER
Sbjct: 208 QEILATGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGER 267

Query: 67  TRSGNDLYMEMKESGVIN-EENLAESKVALVYGQMNELWGARMRVGSTALTMAEYF 122
           TR GNDLY EM ESGVI   E  +ESK ALVYGQMNE  GAR RVG T LT+AEYF
Sbjct: 268 TREGNDLYREMIESGVIKLGEKQSESKCALVYGQMNEPPGARARVGLTGLTVAEYF 323

[Close]

BLAST of Bhi08G000465 vs. TAIR 10
Match: AT5G08690.1 (ATP synthase alpha/beta family protein )

HSP 1 Score: 166.8 bits (421), Expect = 1.1e-41
Identity = 89/116 (76.72%), Postives = 94/116 (81.03%), Query Frame = 0


Query: 7   EESQETGIKVEDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVFVFGGVDER 66
           +E   TGIKV DLLAPY+RGGKIGLFGGAGVGKTVLIMELINN+AKAHGG  VF GV ER
Sbjct: 205 QEILATGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGER 264

Query: 67  TRSGNDLYMEMKESGVIN-EENLAESKVALVYGQMNELWGARMRVGSTALTMAEYF 122
           TR GNDLY EM ESGVI   E  +ESK ALVYGQMNE  GAR RVG T LT+AEYF
Sbjct: 265 TREGNDLYREMIESGVIKLGEKQSESKCALVYGQMNEPPGARARVGLTGLTVAEYF 320

[Close]

BLAST of Bhi08G000465 vs. ExPASy Swiss-Prot
Match: Q8S8W8 (ATP synthase subunit beta, chloroplastic OS=Atropa belladonna OX=33113 GN=atpB PE=3 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 7.4e-51
Identity = 103/111 (92.79%), Postives = 104/111 (93.69%), Query Frame = 0


Query: 11  ETGIKVEDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVFVFGGVDERTRSG 70
           ETGIKV DLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV VFGGV ERTR G
Sbjct: 150 ETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREG 209

Query: 71  NDLYMEMKESGVINEENLAESKVALVYGQMNELWGARMRVGSTALTMAEYF 122
           NDLYMEMKESGVINEEN+AESKVALVYGQMNE  GARMRVG TALTMAEYF
Sbjct: 210 NDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYF 260

[Close]

BLAST of Bhi08G000465 vs. ExPASy Swiss-Prot
Match: Q9MRR9 (ATP synthase subunit beta, chloroplastic OS=Brasenia schreberi OX=4424 GN=atpB PE=3 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 7.4e-51
Identity = 103/111 (92.79%), Postives = 104/111 (93.69%), Query Frame = 0


Query: 11  ETGIKVEDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVFVFGGVDERTRSG 70
           ETGIKV DLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV VFGGV ERTR G
Sbjct: 150 ETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREG 209

Query: 71  NDLYMEMKESGVINEENLAESKVALVYGQMNELWGARMRVGSTALTMAEYF 122
           NDLYMEMKESGVINEEN+AESKVALVYGQMNE  GARMRVG TALTMAEYF
Sbjct: 210 NDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYF 260

[Close]

BLAST of Bhi08G000465 vs. ExPASy Swiss-Prot
Match: Q8MBM4 (ATP synthase subunit beta, chloroplastic OS=Calystegia sepium OX=47519 GN=atpB PE=3 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 7.4e-51
Identity = 103/111 (92.79%), Postives = 104/111 (93.69%), Query Frame = 0


Query: 11  ETGIKVEDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVFVFGGVDERTRSG 70
           ETGIKV DLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV VFGGV ERTR G
Sbjct: 148 ETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREG 207

Query: 71  NDLYMEMKESGVINEENLAESKVALVYGQMNELWGARMRVGSTALTMAEYF 122
           NDLYMEMKESGVINEEN+AESKVALVYGQMNE  GARMRVG TALTMAEYF
Sbjct: 208 NDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYF 258

[Close]

BLAST of Bhi08G000465 vs. ExPASy Swiss-Prot
Match: Q9MRM0 (ATP synthase subunit beta, chloroplastic OS=Canella winterana OX=3426 GN=atpB PE=3 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 7.4e-51
Identity = 103/111 (92.79%), Postives = 104/111 (93.69%), Query Frame = 0


Query: 11  ETGIKVEDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVFVFGGVDERTRSG 70
           ETGIKV DLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV VFGGV ERTR G
Sbjct: 150 ETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREG 209

Query: 71  NDLYMEMKESGVINEENLAESKVALVYGQMNELWGARMRVGSTALTMAEYF 122
           NDLYMEMKESGVINEEN+AESKVALVYGQMNE  GARMRVG TALTMAEYF
Sbjct: 210 NDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYF 260

[Close]

BLAST of Bhi08G000465 vs. ExPASy Swiss-Prot
Match: A6MMC9 (ATP synthase subunit beta, chloroplastic OS=Chloranthus spicatus OX=13006 GN=atpB PE=3 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 7.4e-51
Identity = 103/111 (92.79%), Postives = 104/111 (93.69%), Query Frame = 0


Query: 11  ETGIKVEDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVFVFGGVDERTRSG 70
           ETGIKV DLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV VFGGV ERTR G
Sbjct: 150 ETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREG 209

Query: 71  NDLYMEMKESGVINEENLAESKVALVYGQMNELWGARMRVGSTALTMAEYF 122
           NDLYMEMKESGVINEEN+AESKVALVYGQMNE  GARMRVG TALTMAEYF
Sbjct: 210 NDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYF 260

[Close]

BLAST of Bhi08G000465 vs. ExPASy TrEMBL
Match: A0A142DPV3 (ATP synthase subunit beta, chloroplastic OS=Phyllostegia velutina OX=141782 GN=atpB PE=3 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.2e-48
Identity = 103/111 (92.79%), Postives = 104/111 (93.69%), Query Frame = 0


Query: 11  ETGIKVEDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVFVFGGVDERTRSG 70
           ETGIKV DLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV VFGGV ERTR G
Sbjct: 150 ETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREG 209

Query: 71  NDLYMEMKESGVINEENLAESKVALVYGQMNELWGARMRVGSTALTMAEYF 122
           NDLYMEMKESGVINEEN+AESKVALVYGQMNE  GARMRVG TALTMAEYF
Sbjct: 210 NDLYMEMKESGVINEENIAESKVALVYGQMNEPXGARMRVGLTALTMAEYF 260

[Close]

BLAST of Bhi08G000465 vs. ExPASy TrEMBL
Match: A0A0H3VNB1 (ATP synthase subunit beta, chloroplastic OS=Drymophloeus litigiosus OX=145687 GN=atpB PE=3 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.2e-48
Identity = 103/111 (92.79%), Postives = 105/111 (94.59%), Query Frame = 0


Query: 11  ETGIKVEDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVFVFGGVDERTRSG 70
           ETGIKV DLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV VFGGV ERTR G
Sbjct: 153 ETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREG 212

Query: 71  NDLYMEMKESGVINEENLAESKVALVYGQMNELWGARMRVGSTALTMAEYF 122
           NDLYMEMKESGVINE+N+AESKVALVYGQMNEL GARMRVG TALTMAEYF
Sbjct: 213 NDLYMEMKESGVINEKNIAESKVALVYGQMNELPGARMRVGLTALTMAEYF 263

[Close]

BLAST of Bhi08G000465 vs. ExPASy TrEMBL
Match: A0A3S5H4F0 (ATP synthase subunit beta, chloroplastic OS=Ricotia lunaria OX=664053 GN=atpB PE=3 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.6e-48
Identity = 104/111 (93.69%), Postives = 104/111 (93.69%), Query Frame = 0


Query: 11  ETGIKVEDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVFVFGGVDERTRSG 70
           ETGIKV DLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV VFGGV ERTR G
Sbjct: 150 ETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREG 209

Query: 71  NDLYMEMKESGVINEENLAESKVALVYGQMNELWGARMRVGSTALTMAEYF 122
           NDLYMEMKESGVINEENLAESKVALVYGQMNE  GARMRVG TALTMAEYF
Sbjct: 210 NDLYMEMKESGVINEENLAESKVALVYGQMNEPPGARMRVGLTALTMAEYF 260

[Close]

BLAST of Bhi08G000465 vs. ExPASy TrEMBL
Match: A0A7U1APL3 (ATP synthase CF1 beta subunit OS=Torenia fournieri OX=68875 GN=atpB PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.6e-48
Identity = 104/111 (93.69%), Postives = 104/111 (93.69%), Query Frame = 0


Query: 11  ETGIKVEDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVFVFGGVDERTRSG 70
           ETGIKV DLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV VFGGV ERTR G
Sbjct: 150 ETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREG 209

Query: 71  NDLYMEMKESGVINEENLAESKVALVYGQMNELWGARMRVGSTALTMAEYF 122
           NDLYMEMKESGVINEENLAESKVALVYGQMNE  GARMRVG TALTMAEYF
Sbjct: 210 NDLYMEMKESGVINEENLAESKVALVYGQMNEPPGARMRVGLTALTMAEYF 260

[Close]

BLAST of Bhi08G000465 vs. ExPASy TrEMBL
Match: A0A649UJG4 (ATP synthase subunit beta, chloroplastic OS=Torenia benthamiana OX=1280383 GN=atpB PE=3 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.6e-48
Identity = 104/111 (93.69%), Postives = 104/111 (93.69%), Query Frame = 0


Query: 11  ETGIKVEDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVFVFGGVDERTRSG 70
           ETGIKV DLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV VFGGV ERTR G
Sbjct: 150 ETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREG 209

Query: 71  NDLYMEMKESGVINEENLAESKVALVYGQMNELWGARMRVGSTALTMAEYF 122
           NDLYMEMKESGVINEENLAESKVALVYGQMNE  GARMRVG TALTMAEYF
Sbjct: 210 NDLYMEMKESGVINEENLAESKVALVYGQMNEPPGARMRVGLTALTMAEYF 260

The following BLAST results are available for this feature:

BLAST of Bhi08G000465 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00480.1	6.8e-52	92.79	ATP synthase subunit beta	[more]
AT5G08670.1	1.1e-41	76.72	ATP synthase alpha/beta family protein	[more]
AT5G08680.1	1.1e-41	76.72	ATP synthase alpha/beta family protein	[more]
AT5G08690.1	1.1e-41	76.72	ATP synthase alpha/beta family protein	[more]

BLAST of Bhi08G000465 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S8W8	7.4e-51	92.79	ATP synthase subunit beta, chloroplastic OS=Atropa belladonna OX=33113 GN=atpB P...	[more]
Q9MRR9	7.4e-51	92.79	ATP synthase subunit beta, chloroplastic OS=Brasenia schreberi OX=4424 GN=atpB P...	[more]
Q8MBM4	7.4e-51	92.79	ATP synthase subunit beta, chloroplastic OS=Calystegia sepium OX=47519 GN=atpB P...	[more]
Q9MRM0	7.4e-51	92.79	ATP synthase subunit beta, chloroplastic OS=Canella winterana OX=3426 GN=atpB PE...	[more]
A6MMC9	7.4e-51	92.79	ATP synthase subunit beta, chloroplastic OS=Chloranthus spicatus OX=13006 GN=atp...	[more]

BLAST of Bhi08G000465 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A142DPV3	1.2e-48	92.79	ATP synthase subunit beta, chloroplastic OS=Phyllostegia velutina OX=141782 GN=a...	[more]
A0A0H3VNB1	1.2e-48	92.79	ATP synthase subunit beta, chloroplastic OS=Drymophloeus litigiosus OX=145687 GN...	[more]
A0A3S5H4F0	1.6e-48	93.69	ATP synthase subunit beta, chloroplastic OS=Ricotia lunaria OX=664053 GN=atpB PE...	[more]
A0A7U1APL3	1.6e-48	93.69	ATP synthase CF1 beta subunit OS=Torenia fournieri OX=68875 GN=atpB PE=4 SV=1	[more]
A0A649UJG4	1.6e-48	93.69	ATP synthase subunit beta, chloroplastic OS=Torenia benthamiana OX=1280383 GN=at...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 3..121 e-value: 1.6E-40 score: 141.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 4..121
IPR000194	ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain	PFAM	PF00006	ATP-synt_ab	coord: 13..121 e-value: 5.4E-20 score: 72.0
None	No IPR available	PANTHER	PTHR15184	ATP SYNTHASE	coord: 10..121

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi08M000465	Bhi08M000465	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0046961	proton-transporting ATPase activity, rotational mechanism
molecular_function	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism