Bhi08G000410 (gene) Wax gourd (B227) v1

Overview
NameBhi08G000410
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
Descriptionprotein PSY1-like
Locationchr8: 16412593 .. 16415173 (+)
RNA-Seq ExpressionBhi08G000410
SyntenyBhi08G000410
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGGAAAAAAGAAAAAAAAAAAAAGAGAAAAAGGGAAAGAAAGGAAAGGAAAACCCATTTTCCTTCTCATTCAAAATCTATAAATATGGATCCTTTGGCTTTGGCTTCTCCATTCATTACTTTTCACTCTTATGTTGAAATTAGAAGGTGAAGAGAAGTAGAGATATATACTAATGGCTTCTTCTTCTCGACTCTCGCTTTACTTTTCTTTCTTCTTTCTTCTCCTTTTAGTTACCGTTATGGTAGCTTCTGTCGCTCGCTATGCGCCTGCAAATCCAATTGCAAGCATGAAGAGTAAGAAACGAAACTCTTTCTTCTTCTTCTTCTTCACCTTATTCGTTTCTTTTCGTTAAATATGTTGTAACTTTTTTGTTTAAATTTTTTACGATTTAATAGTTTAACATAGTATCAGAGAGATCAACATCGATCTCTTGAAGTTCAAAACTTTTGCAGTGTCGTATTTTTCTTATTTCATATAATAATAGTCTAGTTTGTCAAAATTTTGTGCCAAGTTTCAAGTTCAAAGGAGAGAATGCTGAGAGAATATGCATACAAATGATTAAATATGCCGAACCAAGTTTTCATCGCTTTATCGAAAGAGTTAAGAGTAAAATGCTATTTTAGTTTTTGGACTTTGGTATTCATTTTATTTTAGTTAATGTATTTTCAAATATCTACATTTATTATTTGTAGTATTTTCAATAAATTTTAAATTTAATCCTTATTACCTAATAACAATAATCTCCATTTTTGAGGAAATAACACTACACATGCATGTGCTTACAAAATTTATAAAGAGAGTCCTAATTAAGACTAAAATTTTGTTTGAAAAAATAAATGTTATAACTAATTACAAAGGTTATTATTAAGATTTACCGATAGTATAGAGACTAATAACATTTGAAAGTACATAAATTAAAATGGAATGAAACCTAAAGTATAAGGAGACCAAATAGTATTTTAATATCCTAATTTTAACTTGTGTTATCAAAATAAAAGTTTTTGAGTTCTTCCTCCATTTCATTATATATGATAATTAATTAACTCTTAGCCCTTACGTTTAATTTTCAACCTTTTGTAAACGATAAAATTTATTTTGTGGGTTTATTTGGTAGAGTTTAAGTTAATGAGATTTGTGGTTAAAAATGTTTGTAGGAAATGAAGGCATGATTGGCTTACAAGACTATGGTGATGCACGCGCCAATCATAGACATGATCCTCACCATCCTTTAAGCATCAAGGGTAAGCCTAATCATACATTTTCGTCAATTATATCTTTCAAATCGTCTAGACTAACAATCTATATTATTCTCCGTCAAAAGAAAATTTTAGTAAATAACCAAAACACATGGGCTAAGGGTCAAGTTGTAATTTTTCTTACATCTCTCTCTTAGAGCCCTTGTATCATAAACGCCCCCAAAATAAATAGCTTTGAATACAAGAAGAAAAACACTTGTACCTAACAAAATTAAGTGAATACTTAAAATGACAGTCATTTTATTTTTATCTTTCCACACACAATCAAAGAATGAAAAAGATTCTTTAAGAGTTTTGGGTCCCAGAAGTGCATGTGGAAAATACCACCAAAATATAATATTGCAGATCAAAATCACTCTATATAAATATAAATTATTATTCGAGAGTTAAAACTAATTTATATACCGTTGAATGTACGAGAGAGACCTTTTTTAATAGCTTAATTAGAATAGAAGTCTCTAACTAAATTATTATTACTTAGATTAGTGACTTTTATTTATTTAAATTTAAGTTTTGTTTGTGGCTAAGTTTGATGTTATATATGTTCGATAGAAAAACCTTATAGTGAAGTTCTTGTAGCTTGTTTCGATTATAACTAAGCAAAATTATGATGTTTTTTTAATAGAGCATAATTATTATATTTATAGGTACAACATATACATAGTACATACAAACATAATAATTATGCTTAGTTGTACTTGAAATTATAAGCCATAAGCTTAGCTTACATTATATAGATCACTCTTCTCAAATGTTTGATGTCCTTGTAATTATAGTAAAAAAATATTCTATATATGCTTTTATATTCCATGACTTATATATATCAACCACTTAATAAAATTTGTTGTTATGATTATTTACTGATTTTTGTAGGGAATAACAAGGAATTGGATGGTTAATGGGAAGAGAATGGCAAGGAAAGGGCATTATGGTCAAGTGGTGGAAGCAACAATTTGTGTGTTGAGATAATTAATATAAGAATAAGAAGTTTTACACACTGATATTTTTGCATCCCTTGTTTTATGTATCAAACTAAAAAGATAATATTACTATTACTATTGGTATTGAGGTAGTTTTCTATTATTCTCATTATTGCTGCTCTCCTTCTCTCTCCATATGAGTGATGAAGTTCACATTACCCATTCTAAAACCCAGCAATAAACTTATATTAATCATATTTTTCAAGAATATATATTTCCATTCTGTAATTTATATTAATAAAGCTAAATGTTAAGAAAAAAATGTTGTTATTATTAAAGATTGATAAATATTTTTAAAAATTGGGAAACTTTACAAAATTCAAAATCGGGTGAATTCAATAATAG

mRNA sequence

GGGAAAAAAGAAAAAAAAAAAAAGAGAAAAAGGGAAAGAAAGGAAAGGAAAACCCATTTTCCTTCTCATTCAAAATCTATAAATATGGATCCTTTGGCTTTGGCTTCTCCATTCATTACTTTTCACTCTTATGTTGAAATTAGAAGGTGAAGAGAAGTAGAGATATATACTAATGGCTTCTTCTTCTCGACTCTCGCTTTACTTTTCTTTCTTCTTTCTTCTCCTTTTAGTTACCGTTATGGTAGCTTCTGTCGCTCGCTATGCGCCTGCAAATCCAATTGCAAGCATGAAGAGAAATGAAGGCATGATTGGCTTACAAGACTATGGTGATGCACGCGCCAATCATAGACATGATCCTCACCATCCTTTAAGCATCAAGGGGAATAACAAGGAATTGGATGGTTAATGGGAAGAGAATGGCAAGGAAAGGGCATTATGGTCAAGTGGTGGAAGCAACAATTTGTGTGTTGAGATAATTAATATAAGAATAAGAAGTTTTACACACTGATATTTTTGCATCCCTTGTTTTATGTATCAAACTAAAAAGATAATATTACTATTACTATTGGTATTGAGGTAGTTTTCTATTATTCTCATTATTGCTGCTCTCCTTCTCTCTCCATATGAGTGATGAAGTTCACATTACCCATTCTAAAACCCAGCAATAAACTTATATTAATCATATTTTTCAAGAATATATATTTCCATTCTGTAATTTATATTAATAAAGCTAAATGTTAAGAAAAAAATGTTGTTATTATTAAAGATTGATAAATATTTTTAAAAATTGGGAAACTTTACAAAATTCAAAATCGGGTGAATTCAATAATAG

Coding sequence (CDS)

ATGGCTTCTTCTTCTCGACTCTCGCTTTACTTTTCTTTCTTCTTTCTTCTCCTTTTAGTTACCGTTATGGTAGCTTCTGTCGCTCGCTATGCGCCTGCAAATCCAATTGCAAGCATGAAGAGAAATGAAGGCATGATTGGCTTACAAGACTATGGTGATGCACGCGCCAATCATAGACATGATCCTCACCATCCTTTAAGCATCAAGGGGAATAACAAGGAATTGGATGGTTAA

Protein sequence

MASSSRLSLYFSFFFLLLLVTVMVASVARYAPANPIASMKRNEGMIGLQDYGDARANHRHDPHHPLSIKGNNKELDG
Homology
[Close]
BLAST of Bhi08G000410 vs. ExPASy TrEMBL
Match: A0A0A0LXN0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G532270 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 1.1e-21
Identity = 63/83 (75.90%), Postives = 68/83 (81.93%), Query Frame = 0 

Query: 1  MASSS----RLSLYFSFFFLLLLVTVMVASVARYAPANPIASMKRNE-GMIGLQDYGDAR 60
          MASSS    RLS YFSF  LLLL T MVAS AR+APA P++S KRN+  MIGLQDYGDAR
Sbjct: 1  MASSSSPPPRLSFYFSFLILLLLATAMVASAARHAPAIPVSSNKRNDKEMIGLQDYGDAR 60

Query: 61 ANHRHDPHHPLSI-KGNNKELDG 78
          ANHRHDPHHPLS+ KGNNKELDG
Sbjct: 61 ANHRHDPHHPLSVNKGNNKELDG 83

[Close]
BLAST of Bhi08G000410 vs. ExPASy TrEMBL
Match: A0A1S3C5B4 (protein PSY1-like OS=Cucumis melo OX=3656 GN=LOC103497069 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 3.1e-21
Identity = 59/78 (75.64%), Postives = 65/78 (83.33%), Query Frame = 0 

Query: 2  ASSSRLSLYFSFFFLLLLVTVMVASVARYAPANPIASMKRN-EGMIGLQDYGDARANHRH 61
          +SS RLS YFSF  LLLL T MVAS AR+AP  PI+S +RN EGMIGLQDYGDARANHRH
Sbjct: 5  SSSPRLSFYFSFLLLLLLTTAMVASAARHAPPIPISSNERNDEGMIGLQDYGDARANHRH 64

Query: 62 DPHHPLSI-KGNNKELDG 78
          DPHHPL++ KGN KELDG
Sbjct: 65 DPHHPLTVNKGNKKELDG 82

[Close]
BLAST of Bhi08G000410 vs. ExPASy TrEMBL
Match: A0A6J1K9X5 (uncharacterized protein LOC111492989 OS=Cucurbita maxima OX=3661 GN=LOC111492989 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.3e-14
Identity = 45/74 (60.81%), Postives = 57/74 (77.03%), Query Frame = 0 

Query: 4  SSRLSLYFS-FFFLLLLVTVMVASVARYAPANPIASMKRNEGMIGLQDYGDARANHRHDP 63
          +S+ SLYFS  FFLL    ++ A  AR  PANPI+S +R++ MIGL+DYGDARANHRH+P
Sbjct: 2  ASQSSLYFSLLFFLLSTAAIVAAFEARNIPANPISSTERHDEMIGLRDYGDARANHRHEP 61

Query: 64 HHPLSIKGNNKELD 77
          HHPL ++G  KELD
Sbjct: 62 HHPLGVEGYKKELD 75

[Close]
BLAST of Bhi08G000410 vs. ExPASy TrEMBL
Match: A0A6J1D9T4 (uncharacterized protein LOC111018956 OS=Momordica charantia OX=3673 GN=LOC111018956 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 2.0e-12
Identity = 48/103 (46.60%), Postives = 57/103 (55.34%), Query Frame = 0 

Query: 4   SSRLSLYFSFFFLLLLVTVMVASVARYAPANPIASMKRNEG------------------- 63
           +SRLSLYFS   LLL    +V+S AR+APA   + + RN G                   
Sbjct: 2   ASRLSLYFSLLILLLATASIVSSAARHAPATS-SKLARNGGMVEIHERFAKSRVEDNSMV 61

Query: 64  ----------MIGLQDYGDARANHRHDPHHPLSIKGNNKELDG 78
                     MIGL DYGD  ANH+HDPHHPL++KGNNKELDG
Sbjct: 62  HHRLLTGHEEMIGLHDYGDTHANHKHDPHHPLAVKGNNKELDG 103

The following BLAST results are available for this feature:
BLAST of Bhi08G000410 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi08G000410 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi08G000410 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LXN01.1e-2175.90Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G532270 PE=4 SV=1[more]
A0A1S3C5B43.1e-2175.64protein PSY1-like OS=Cucumis melo OX=3656 GN=LOC103497069 PE=4 SV=1[more]
A0A6J1K9X51.3e-1460.81uncharacterized protein LOC111492989 OS=Cucurbita maxima OX=3661 GN=LOC111492989... [more]
A0A6J1D9T42.0e-1246.60uncharacterized protein LOC111018956 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..77

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi08M000410Bhi08M000410mRNA