Bhi08G000404 (gene) Wax gourd (B227) v1

Overview


Name	Bhi08G000404
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	ran-binding protein 1 homolog a-like
Location	chr8: 16286637 .. 16289461 (-)
RNA-Seq Expression	Bhi08G000404
Synteny	Bhi08G000404

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAGCACCGATCCTGAACGCAGAGACGACGATGAGGCTCCTGCCGGAGAGATGAAAGACACTGGAGCTCAAGTCGCCCCGATCGTCAAATGGAGGCCGTCGACGTTACCACTGGTGAAGAAGACGAGGACGCTATTCTCGATCTGTAGGCCTTTTCTCTACAATTCTTCTCTAATCTCTTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTCGATCTACGTTTTGGTTCGTTAGTTTGACTTGTTTCGTTCTGAATATTCATTGTTTTAGGAAGGCAAAACTGTATCGATTCGATAAAGATGGAAACCAATGGAAGGAGAGGGGTGCTGGTACTGTTAAGTTTTTGAAACATAAGCAGACTGGAAAGGTTCGCCTTGTTATGAGGCAGTCTAAAACGCTTAAGATCTGCGCTAATCATCTTGGTTCGTTCTTGATTATTTACCCCTTATGCTCATACAATTGAGTTCTTTTGAGTGCTTTAGTGTATATTGTTTGATTGTTGTGCTTTTGTAGTTCTTCCATCAATGACGGTTCAAGAACACGCTGGAAATGATAAATCGTGCGTGTGGCATGCGACTGACTTCGCTGATGGAGAACTGAAAGATGAGCTTTTCTGTATCAGATTCCCATCTATTGAGAGTGAGTACAATTTTCTAATTCTTTTTCCCTGAGATTTGGCTGTTGGTTTGACTGTCTGATGGGTTCTTTGAGGCTTTGTATTCCCATCCTTCTTTTTGCACCCGAATGGCTTCAATGTATGTGGTATGGTTTTTCCAGTTTGTCACTTTAAGGAACTACAGTATAATCTACGATCATGATATGGATCTAAGTCTAATGTTTCACTTAAACATGGTAATCCTTGGTTCAATTAAAGATTCAAGCACGTTGTATTATTCTGTTTCTAACTTTTCATTAGATGATTTTATCAATTGGGCTTTTACTGTATTTCTTCTTCTTCTTCTTCTTCTTTAAAGAAATTATATATACTGATTCTTAACTGGACCATTGACAATTTTCATTTCCATTTTGACTAATATTTGGTTTTTCTTTTCCTAATAAGAAAAAGGAAAGTTCATTGTCCATACATTCATGATTCATCCTTGTTGTATAATTCTGAAAATTCTGATTTTCTGTGTGTGACATTATGGCAGTAGCAAAGTAGGAGATTGGCTGAACCAAAAACAAAAAAAGAAAAAGAAGTGTTTGATTAGAGAAAGTGGGTGAAGAGGAGTCAGGAGATTAATTTTAATGATGACCAGAGAAAATTTTGGTGGTGGCAAATCAGGAGATAGGTGGGAGTATTAGCTGAAATTTTATTTTAGGCATACAAAGAATAGAATTCAATAGTTTGGGTGAATTGGAGTACCTATTGTGAAGAGAAGATTGTGGCAATGGAAGGGTAGGAGCCAGGAGGATTGGAAGGTGAAATGAAAGAATACAATTGGATGCTCTCACTTCCATGGGATTGACCACTTTGCATTAGAAACCGGATTTAATTTGGATGATCATATGCATAATTCTATCGTTTTAAACTGTATTTCTAGACCAATTAAAGAAGCATATTACATGAAAGTCAATCTCTCTGACATCTAATTTAATTTCCTGGTTTTATTGGTTTAAATTGTTTGTCTCTAGTTGTAGGAGATTGTCCATGTCCACTCCATCATACTCTTTTGTTGTTGTGTCTTCAATGAATGTCTGTCAGAAGTTCTCTCAATAAGATAGGAACCTTGTATAAATGATTAATCAAGGTTTGATCTTTTTCTTCTCTCTTTTCTTCTGGGGGTGATGTGGTAGTACTCCTTTGAATTTTCTAAAGCATCTACTTTGTGATCACTTCATCTCTCTGATAGAGGAAATCAAATTTCTTTGAAATCTTCAACTTCTAAACTAACTCAAGTTAAAAGTCTTGTAGGTAACTTTTCATTCATTTGTGTTCTGTATAATCACTAAATTATTAAGCAACGTGGAGACGGGCATGTTGGCACGCACGATTACATTTTTAGATATAACCGCTCAGACACTGTGTGTTCTTTATTCAATTTCTCATTATATTGCTCAAAATGGGGACAAATACCTGTCTTTTCCATTGCTCAGCTCAACTTGTTTTTATTACTTTTCCTTTCCTTAATTTTATTTTTAACCCTCTTTTCTCAACTTTTAGGGTTATTTAATCTTTTTTTGGGATTTGGCACTCATTTTTATTATTTCTCAAAGTTTATGATTTCCTTTATTTCTCTCAAACTGTTCGGTTCATCTTTGGAGCATCTCTTGATTTAAAAAATGTAAAAAATTCTGCCTACGCTTAGGTGGTTAAGGCATAAATCTACCGAGGTTTGAGTTCCCACACCTTGTATGTGATTGAACTAAAAAAATGTAAGAAAAATCCAGCACTTGTATCATCGTATTCTTGATTCAACTCTTAAGATCCTTAGAGCATCATTTATTGAATGTTCATCTTATCATCTTTGTTCTATCTTAAGAAGATCGATCTTTATTAACTAATACTAGTTGCGTTATTCCCCTTGGTAACAAATATTCTGTTTGCTTCAGACTGCAAATCTTTCATGGAAACGTTCCAAGAAATTGCCGAGGCCCAACAGAAGAAGGTGGAGAATAAAGATGCATCTGCTGCAGCCGGATTACTTGAGAAACTGAGTGTTGAAGAAAAAAAGGCTGAAGATAAAGCTGGGGAGGAACCCGCCAAACCTAAGAAAGAGGATGACCCCAAGGAGGGCGAGCCAGAAAATTCAGATGCAGAGAAGAAAAATGATGAGTAG

mRNA sequence

ATGGCCAGCACCGATCCTGAACGCAGAGACGACGATGAGGCTCCTGCCGGAGAGATGAAAGACACTGGAGCTCAAGCCGTCGACGTTACCACTGGTGAAGAAGACGAGGACGCTATTCTCGATCTGAAGGCAAAACTGTATCGATTCGATAAAGATGGAAACCAATGGAAGGAGAGGGGTGCTGGTACTGTTAAGTTTTTGAAACATAAGCAGACTGGAAAGGTTCGCCTTGTTATGAGGCAGTCTAAAACGCTTAAGATCTGCGCTAATCATCTTGTTCTTCCATCAATGACGGTTCAAGAACACGCTGGAAATGATAAATCGTGCGTGTGGCATGCGACTGACTTCGCTGATGGAGAACTGAAAGATGAGCTTTTCTGTATCAGATTCCCATCTATTGAGAACTGCAAATCTTTCATGGAAACGTTCCAAGAAATTGCCGAGGCCCAACAGAAGAAGGTGGAGAATAAAGATGCATCTGCTGCAGCCGGATTACTTGAGAAACTGAGTGTTGAAGAAAAAAAGGCTGAAGATAAAGCTGGGGAGGAACCCGCCAAACCTAAGAAAGAGGATGACCCCAAGGAGGGCGAGCCAGAAAATTCAGATGCAGAGAAGAAAAATGATGAGTAG

Coding sequence (CDS)

ATGGCCAGCACCGATCCTGAACGCAGAGACGACGATGAGGCTCCTGCCGGAGAGATGAAAGACACTGGAGCTCAAGCCGTCGACGTTACCACTGGTGAAGAAGACGAGGACGCTATTCTCGATCTGAAGGCAAAACTGTATCGATTCGATAAAGATGGAAACCAATGGAAGGAGAGGGGTGCTGGTACTGTTAAGTTTTTGAAACATAAGCAGACTGGAAAGGTTCGCCTTGTTATGAGGCAGTCTAAAACGCTTAAGATCTGCGCTAATCATCTTGTTCTTCCATCAATGACGGTTCAAGAACACGCTGGAAATGATAAATCGTGCGTGTGGCATGCGACTGACTTCGCTGATGGAGAACTGAAAGATGAGCTTTTCTGTATCAGATTCCCATCTATTGAGAACTGCAAATCTTTCATGGAAACGTTCCAAGAAATTGCCGAGGCCCAACAGAAGAAGGTGGAGAATAAAGATGCATCTGCTGCAGCCGGATTACTTGAGAAACTGAGTGTTGAAGAAAAAAAGGCTGAAGATAAAGCTGGGGAGGAACCCGCCAAACCTAAGAAAGAGGATGACCCCAAGGAGGGCGAGCCAGAAAATTCAGATGCAGAGAAGAAAAATGATGAGTAG

Protein sequence

MASTDPERRDDDEAPAGEMKDTGAQAVDVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKFLKHKQTGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWHATDFADGELKDELFCIRFPSIENCKSFMETFQEIAEAQQKKVENKDASAAAGLLEKLSVEEKKAEDKAGEEPAKPKKEDDPKEGEPENSDAEKKNDE

Homology

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BLAST of Bhi08G000404 vs. TAIR 10
Match: AT1G07140.1 (Pleckstrin homology (PH) domain superfamily protein )

HSP 1 Score: 259.6 bits (662), Expect = 2.1e-69
Identity = 147/223 (65.92%), Postives = 173/223 (77.58%), Query Frame = 0


Query: 1   MASTDP--ERRDDDEAPAGEMKDTGAQA--------VDVTTGEEDEDAILDLKAKLYRFD 60
           MA+ +P  E RD++EA A E +DTGAQ         V VTTGEEDEDA+LDLK+KLYRFD
Sbjct: 1   MATNEPEHEHRDEEEAGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKLYRFD 60

Query: 61  KDGNQWKERGAGTVKFLKHKQTGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCV 120
           KD NQWKERGAGTVKFLKHK TGK+RLVMRQSKTLKICANH V   M+VQEH GN+KSCV
Sbjct: 61  KDANQWKERGAGTVKFLKHKNTGKIRLVMRQSKTLKICANHFVKSGMSVQEHVGNEKSCV 120

Query: 121 WHATDFADGELKDELFCIRFPSIENCKSFMETFQEIAEAQQKKVENKDASAAAGLLEKLS 180
           WHA DFADGELKDELFCIRF SIENCK+FM+ F+E+AE++++K E+KDA+  AGLLEKL+
Sbjct: 121 WHARDFADGELKDELFCIRFASIENCKTFMQKFKEVAESEEEKEESKDAADTAGLLEKLT 180

Query: 181 VEEKKAEDKA---GEEPAKPK-KEDDPKEGEPENSDAEKKNDE 210
           VEE K E+K      E AK + K ++ KE E E S   KK +E
Sbjct: 181 VEETKTEEKTEAKAVETAKTEVKAEEKKESEAEKSGEAKKTEE 223

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BLAST of Bhi08G000404 vs. TAIR 10
Match: AT2G30060.1 (Pleckstrin homology (PH) domain superfamily protein )

HSP 1 Score: 257.7 bits (657), Expect = 8.1e-69
Identity = 140/209 (66.99%), Postives = 169/209 (80.86%), Query Frame = 0


Query: 3   STDPER--RDDDEAPAGEMKDTGAQA--------VDVTTGEEDEDAILDLKAKLYRFDKD 62
           S +PER  RD++E  A E +DTGAQ         V VTTGEEDED ILDLK+KLYRFDKD
Sbjct: 5   SNEPERENRDEEETGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDTILDLKSKLYRFDKD 64

Query: 63  GNQWKERGAGTVKFLKHKQTGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWH 122
           G+QWKERGAGTVKFLKH+ +GK+RLVMRQSKTLKICANHLV   M+VQEHAGNDKSCVWH
Sbjct: 65  GSQWKERGAGTVKFLKHRVSGKIRLVMRQSKTLKICANHLVGSGMSVQEHAGNDKSCVWH 124

Query: 123 ATDFADGELKDELFCIRFPSIENCKSFMETFQEIAEAQQKKVENKDASAAAGLLEKLSVE 182
           A DF+DGELKDELFCIRF S+ENCK+FM+ F+E+AE++++K E+KDAS  AGLLEKL+VE
Sbjct: 125 ARDFSDGELKDELFCIRFASVENCKAFMQKFKEVAESEEEKEESKDASDTAGLLEKLTVE 184

Query: 183 EKKAEDKAGEEPAKPKKEDDPKEGEPENS 202
           EK++E K  E+  + KK +  +E + E S
Sbjct: 185 EKESEKKPVEKAEENKKSEAVEEKKTEES 213

[Close]

BLAST of Bhi08G000404 vs. TAIR 10
Match: AT5G58590.1 (RAN binding protein 1 )

HSP 1 Score: 256.1 bits (653), Expect = 2.4e-68
Identity = 145/218 (66.51%), Postives = 170/218 (77.98%), Query Frame = 0


Query: 1   MASTDPERRD-DDEAPAGEMKDTGAQA--------VDVTTGEEDEDAILDLKAKLYRFDK 60
           MAST+PER + +DE    E +DTGAQ         V VTTGEEDEDA+LDLK+K+YRFDK
Sbjct: 1   MASTEPERENREDETEVNEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKMYRFDK 60

Query: 61  DGNQWKERGAGTVKFLKHKQTGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVW 120
           +GNQWKERGAGTVK LKHK+TGKVRLVMRQSKTLKICANHL+   M+VQEH+GN+KSC+W
Sbjct: 61  EGNQWKERGAGTVKLLKHKETGKVRLVMRQSKTLKICANHLISSGMSVQEHSGNEKSCLW 120

Query: 121 HATDFADGELKDELFCIRFPSIENCKSFMETFQEIAEAQQKKVENKDASAAAGLLEKLSV 180
           HATDF+DGELKDELFCIRF SIENCK+FME F EIAE+QQ   E+     AAGL+E LSV
Sbjct: 121 HATDFSDGELKDELFCIRFASIENCKTFMEKFTEIAESQQVGKESTQGDEAAGLIENLSV 180

Query: 181 EEKKAEDKAGE-EPAKPKKEDDPKEGEPENSDAEKKND 209
           EE  +E+KA E E  +P KED  KE + E  + EKK +
Sbjct: 181 EENISEEKAKEAEEKEPAKED--KETKKEKVEEEKKTE 216

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BLAST of Bhi08G000404 vs. ExPASy Swiss-Prot
Match: Q9LMK7 (Ran-binding protein 1 homolog a OS=Arabidopsis thaliana OX=3702 GN=RANBP1A PE=1 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 3.0e-68
Identity = 147/223 (65.92%), Postives = 173/223 (77.58%), Query Frame = 0


Query: 1   MASTDP--ERRDDDEAPAGEMKDTGAQA--------VDVTTGEEDEDAILDLKAKLYRFD 60
           MA+ +P  E RD++EA A E +DTGAQ         V VTTGEEDEDA+LDLK+KLYRFD
Sbjct: 1   MATNEPEHEHRDEEEAGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKLYRFD 60

Query: 61  KDGNQWKERGAGTVKFLKHKQTGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCV 120
           KD NQWKERGAGTVKFLKHK TGK+RLVMRQSKTLKICANH V   M+VQEH GN+KSCV
Sbjct: 61  KDANQWKERGAGTVKFLKHKNTGKIRLVMRQSKTLKICANHFVKSGMSVQEHVGNEKSCV 120

Query: 121 WHATDFADGELKDELFCIRFPSIENCKSFMETFQEIAEAQQKKVENKDASAAAGLLEKLS 180
           WHA DFADGELKDELFCIRF SIENCK+FM+ F+E+AE++++K E+KDA+  AGLLEKL+
Sbjct: 121 WHARDFADGELKDELFCIRFASIENCKTFMQKFKEVAESEEEKEESKDAADTAGLLEKLT 180

Query: 181 VEEKKAEDKA---GEEPAKPK-KEDDPKEGEPENSDAEKKNDE 210
           VEE K E+K      E AK + K ++ KE E E S   KK +E
Sbjct: 181 VEETKTEEKTEAKAVETAKTEVKAEEKKESEAEKSGEAKKTEE 223

[Close]

BLAST of Bhi08G000404 vs. ExPASy Swiss-Prot
Match: Q8RWG8 (Ran-binding protein 1 homolog b OS=Arabidopsis thaliana OX=3702 GN=RANBP1B PE=1 SV=2)

HSP 1 Score: 257.7 bits (657), Expect = 1.1e-67
Identity = 140/209 (66.99%), Postives = 169/209 (80.86%), Query Frame = 0


Query: 3   STDPER--RDDDEAPAGEMKDTGAQA--------VDVTTGEEDEDAILDLKAKLYRFDKD 62
           S +PER  RD++E  A E +DTGAQ         V VTTGEEDED ILDLK+KLYRFDKD
Sbjct: 5   SNEPERENRDEEETGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDTILDLKSKLYRFDKD 64

Query: 63  GNQWKERGAGTVKFLKHKQTGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWH 122
           G+QWKERGAGTVKFLKH+ +GK+RLVMRQSKTLKICANHLV   M+VQEHAGNDKSCVWH
Sbjct: 65  GSQWKERGAGTVKFLKHRVSGKIRLVMRQSKTLKICANHLVGSGMSVQEHAGNDKSCVWH 124

Query: 123 ATDFADGELKDELFCIRFPSIENCKSFMETFQEIAEAQQKKVENKDASAAAGLLEKLSVE 182
           A DF+DGELKDELFCIRF S+ENCK+FM+ F+E+AE++++K E+KDAS  AGLLEKL+VE
Sbjct: 125 ARDFSDGELKDELFCIRFASVENCKAFMQKFKEVAESEEEKEESKDASDTAGLLEKLTVE 184

Query: 183 EKKAEDKAGEEPAKPKKEDDPKEGEPENS 202
           EK++E K  E+  + KK +  +E + E S
Sbjct: 185 EKESEKKPVEKAEENKKSEAVEEKKTEES 213

[Close]

BLAST of Bhi08G000404 vs. ExPASy Swiss-Prot
Match: P92985 (Ran-binding protein 1 homolog c OS=Arabidopsis thaliana OX=3702 GN=RANBP1C PE=2 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 3.3e-67
Identity = 145/218 (66.51%), Postives = 170/218 (77.98%), Query Frame = 0


Query: 1   MASTDPERRD-DDEAPAGEMKDTGAQA--------VDVTTGEEDEDAILDLKAKLYRFDK 60
           MAST+PER + +DE    E +DTGAQ         V VTTGEEDEDA+LDLK+K+YRFDK
Sbjct: 1   MASTEPERENREDETEVNEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKMYRFDK 60

Query: 61  DGNQWKERGAGTVKFLKHKQTGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVW 120
           +GNQWKERGAGTVK LKHK+TGKVRLVMRQSKTLKICANHL+   M+VQEH+GN+KSC+W
Sbjct: 61  EGNQWKERGAGTVKLLKHKETGKVRLVMRQSKTLKICANHLISSGMSVQEHSGNEKSCLW 120

Query: 121 HATDFADGELKDELFCIRFPSIENCKSFMETFQEIAEAQQKKVENKDASAAAGLLEKLSV 180
           HATDF+DGELKDELFCIRF SIENCK+FME F EIAE+QQ   E+     AAGL+E LSV
Sbjct: 121 HATDFSDGELKDELFCIRFASIENCKTFMEKFTEIAESQQVGKESTQGDEAAGLIENLSV 180

Query: 181 EEKKAEDKAGE-EPAKPKKEDDPKEGEPENSDAEKKND 209
           EE  +E+KA E E  +P KED  KE + E  + EKK +
Sbjct: 181 EENISEEKAKEAEEKEPAKED--KETKKEKVEEEKKTE 216

[Close]

BLAST of Bhi08G000404 vs. ExPASy Swiss-Prot
Match: P41920 (Ran-specific GTPase-activating protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=YRB1 PE=1 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 3.6e-29
Identity = 72/164 (43.90%), Postives = 98/164 (59.76%), Query Frame = 0


Query: 6   PERRDDDEAPAGEMKDTGAQA----------------VDVTTGEEDEDAILDLKAKLYRF 65
           PE + D+E    E K  G  A                VDV T EEDE+ +  ++AKL+RF
Sbjct: 37  PETKKDEEDTKEETKKEGDDAPESPDIHFEPVVHLEKVDVKTMEEDEEVLYKVRAKLFRF 96

Query: 66  DKDGNQWKERGAGTVKFLKHKQTGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSC 125
           D D  +WKERG G  KFLK+K+T KVR++MR+ KTLKICANH++ P  T++ + G+D+S 
Sbjct: 97  DADAKEWKERGTGDCKFLKNKKTNKVRILMRRDKTLKICANHIIAPEYTLKPNVGSDRSW 156

Query: 126 VWHAT-DFADGELKDELFCIRFPSIENCKSFMETFQEIAEAQQK 153
           V+  T D A+GE +   F IRF S EN   F E F++  E  +K
Sbjct: 157 VYACTADIAEGEAEAFTFAIRFGSKENADKFKEEFEKAQEINKK 200

[Close]

BLAST of Bhi08G000404 vs. ExPASy Swiss-Prot
Match: Q09717 (Ran-specific GTPase-activating protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=sbp1 PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 8.0e-29
Identity = 71/160 (44.38%), Postives = 97/160 (60.62%), Query Frame = 0


Query: 2   ASTDPERR----DDDEAPAGEMKD----TGAQAVDVTTGEEDEDAILDLKAKLYRFDKDG 61
           AST+ E++    D+D  PA             AV+  T EE+E     ++AKL+RFDK  
Sbjct: 51  ASTNDEKKPAEGDEDAEPASPEVHFEPIVKLSAVETKTNEEEETVEFKMRAKLFRFDKAA 110

Query: 62  NQWKERGAGTVKFLKHKQTGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWH- 121
           ++WKERG G  + LKHK+TGK RLVMR+ KTLK+CANHL++P M +  + G+D+S VW  
Sbjct: 111 SEWKERGTGDARLLKHKETGKTRLVMRRDKTLKVCANHLLMPEMKLTPNVGSDRSWVWTV 170

Query: 122 ATDFADGELKDELFCIRFPSIENCKSFMETFQEIAEAQQK 153
           A D ++GE   E F IRF + EN   F E F++  E   K
Sbjct: 171 AADVSEGEPTAETFAIRFANSENANLFKENFEKYQEENAK 210

[Close]

BLAST of Bhi08G000404 vs. ExPASy TrEMBL
Match: A0A0A0LV78 (RanBD1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G532330 PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.1e-94
Identity = 193/217 (88.94%), Postives = 199/217 (91.71%), Query Frame = 0


Query: 1   MASTDPERRDDDEAPAGEMKDTGAQ--------AVDVTTGEEDEDAILDLKAKLYRFDKD 60
           MASTD ERRDD+EAPAGE +DTGAQ        AVDVTTGEEDED +LDLKAKLYRFDKD
Sbjct: 1   MASTDSERRDDEEAPAGEDEDTGAQVAPIVKLEAVDVTTGEEDEDTVLDLKAKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKQTGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWH 120
           GNQWKERGAGTVKFLKHKQTGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKQTGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIENCKSFMETFQEIAEAQQKKVENKDASAAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSIENCKSFMETFQEIAE+QQKK ENKDASAAAGLLE LSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIENCKSFMETFQEIAESQQKKGENKDASAAAGLLETLSVE 180

Query: 181 EKKAEDKAGEEPAKPKKEDDPKEGEPENSDAEKKNDE 210
           EKK EDKA EEPAK KKED+PK GEPE S+AEKKNDE
Sbjct: 181 EKKTEDKAEEEPAKVKKEDEPK-GEPEKSEAEKKNDE 216

[Close]

BLAST of Bhi08G000404 vs. ExPASy TrEMBL
Match: A0A5A7UVW8 (Ran-binding protein 1-like protein a-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00830 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 1.5e-94
Identity = 193/217 (88.94%), Postives = 200/217 (92.17%), Query Frame = 0


Query: 1   MASTDPERRDDDEAPAGEMKDTGAQ--------AVDVTTGEEDEDAILDLKAKLYRFDKD 60
           MA++D ERRDD+EA AGE +DTGAQ        AVDVTTGEEDEDA+LDLKAKLYRFDKD
Sbjct: 1   MATSDSERRDDEEAHAGEDEDTGAQVAPIVKLEAVDVTTGEEDEDAVLDLKAKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKQTGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWH 120
           GNQWKERGAGTVKFLKHKQTGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKQTGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIENCKSFMETFQEIAEAQQKKVENKDASAAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSIENCKSFMETFQEIAE+QQKK ENKDASAAAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIENCKSFMETFQEIAESQQKKGENKDASAAAGLLEKLSVE 180

Query: 181 EKKAEDKAGEEPAKPKKEDDPKEGEPENSDAEKKNDE 210
           EKK EDKA EEPAK KKED+PK GEPE SDAEKKNDE
Sbjct: 181 EKKTEDKAEEEPAKAKKEDEPK-GEPEKSDAEKKNDE 216

[Close]

BLAST of Bhi08G000404 vs. ExPASy TrEMBL
Match: A0A1S3C5F4 (ran-binding protein 1 homolog a-like OS=Cucumis melo OX=3656 GN=LOC103497064 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 1.5e-94
Identity = 193/217 (88.94%), Postives = 200/217 (92.17%), Query Frame = 0


Query: 1   MASTDPERRDDDEAPAGEMKDTGAQ--------AVDVTTGEEDEDAILDLKAKLYRFDKD 60
           MA++D ERRDD+EA AGE +DTGAQ        AVDVTTGEEDEDA+LDLKAKLYRFDKD
Sbjct: 1   MATSDSERRDDEEAHAGEDEDTGAQVAPIVKLEAVDVTTGEEDEDAVLDLKAKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKQTGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWH 120
           GNQWKERGAGTVKFLKHKQTGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKQTGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIENCKSFMETFQEIAEAQQKKVENKDASAAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSIENCKSFMETFQEIAE+QQKK ENKDASAAAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIENCKSFMETFQEIAESQQKKGENKDASAAAGLLEKLSVE 180

Query: 181 EKKAEDKAGEEPAKPKKEDDPKEGEPENSDAEKKNDE 210
           EKK EDKA EEPAK KKED+PK GEPE SDAEKKNDE
Sbjct: 181 EKKTEDKAEEEPAKAKKEDEPK-GEPEKSDAEKKNDE 216

[Close]

BLAST of Bhi08G000404 vs. ExPASy TrEMBL
Match: A0A6J1I618 (ran-binding protein 1 homolog a-like OS=Cucurbita maxima OX=3661 GN=LOC111469535 PE=4 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 9.0e-92
Identity = 186/217 (85.71%), Postives = 196/217 (90.32%), Query Frame = 0


Query: 1   MASTDPERRDDDEAPAGEMKDTGAQA--------VDVTTGEEDEDAILDLKAKLYRFDKD 60
           MAS D ERRD +EAPAGE +DTGAQ         V VTTGEE+EDA+LDLKAKLYRFDKD
Sbjct: 1   MASADSERRDTEEAPAGEDEDTGAQVAPIVKLEEVVVTTGEENEDAVLDLKAKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKQTGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWH 120
           GNQWKERGAGTVKFLKHK+TGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIENCKSFMETFQEIAEAQQKKVENKDASAAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSIENCKSFMETFQEIAE+QQKK ENKDAS+AAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIENCKSFMETFQEIAESQQKKEENKDASSAAGLLEKLSVE 180

Query: 181 EKKAEDKAGEEPAKPKKEDDPKEGEPENSDAEKKNDE 210
           EKK EDKAGE P+K K+ED+PK GE E SDAEKKNDE
Sbjct: 181 EKKGEDKAGETPSKTKEEDEPKGGEAEKSDAEKKNDE 217

[Close]

BLAST of Bhi08G000404 vs. ExPASy TrEMBL
Match: A0A6J1HM04 (ran-binding protein 1 homolog a-like OS=Cucurbita moschata OX=3662 GN=LOC111464836 PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 3.6e-88
Identity = 183/217 (84.33%), Postives = 191/217 (88.02%), Query Frame = 0


Query: 1   MASTDPERRDDDEAPAGEMKDTGAQA--------VDVTTGEEDEDAILDLKAKLYRFDKD 60
           MAS D ERRD +EAPAGE +DTGAQ         V VTTGEE+EDA+LDLKAKLYRFDKD
Sbjct: 1   MASADSERRDTEEAPAGEDEDTGAQVAPIVKLEEVVVTTGEENEDAVLDLKAKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKQTGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWH 120
           GNQWKERGAGTVKFLKHK+TGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIENCKSFMETFQEIAEAQQKKVENKDASAAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSIENCKSFMETFQEIAE+QQKK ENKDASAAAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIENCKSFMETFQEIAESQQKKEENKDASAAAGLLEKLSVE 180

Query: 181 EKKAEDKAGEEPAKPKKEDDPKEGEPENSDAEKKNDE 210
           EKK EDKAGE P+K K+ED       E SDAEKKNDE
Sbjct: 181 EKKGEDKAGETPSKTKEED-----VAEKSDAEKKNDE 212

The following BLAST results are available for this feature:

BLAST of Bhi08G000404 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07140.1	2.1e-69	65.92	Pleckstrin homology (PH) domain superfamily protein	[more]
AT2G30060.1	8.1e-69	66.99	Pleckstrin homology (PH) domain superfamily protein	[more]
AT5G58590.1	2.4e-68	66.51	RAN binding protein 1	[more]

BLAST of Bhi08G000404 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LMK7	3.0e-68	65.92	Ran-binding protein 1 homolog a OS=Arabidopsis thaliana OX=3702 GN=RANBP1A PE=1 ...	[more]
Q8RWG8	1.1e-67	66.99	Ran-binding protein 1 homolog b OS=Arabidopsis thaliana OX=3702 GN=RANBP1B PE=1 ...	[more]
P92985	3.3e-67	66.51	Ran-binding protein 1 homolog c OS=Arabidopsis thaliana OX=3702 GN=RANBP1C PE=2 ...	[more]
P41920	3.6e-29	43.90	Ran-specific GTPase-activating protein 1 OS=Saccharomyces cerevisiae (strain ATC...	[more]
Q09717	8.0e-29	44.38	Ran-specific GTPase-activating protein 1 OS=Schizosaccharomyces pombe (strain 97...	[more]

BLAST of Bhi08G000404 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LV78	1.1e-94	88.94	RanBD1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G532330 PE=4...	[more]
A0A5A7UVW8	1.5e-94	88.94	Ran-binding protein 1-like protein a-like OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3C5F4	1.5e-94	88.94	ran-binding protein 1 homolog a-like OS=Cucumis melo OX=3656 GN=LOC103497064 PE=...	[more]
A0A6J1I618	9.0e-92	85.71	ran-binding protein 1 homolog a-like OS=Cucurbita maxima OX=3661 GN=LOC111469535...	[more]
A0A6J1HM04	3.6e-88	84.33	ran-binding protein 1 homolog a-like OS=Cucurbita moschata OX=3662 GN=LOC1114648...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000156	Ran binding domain	SMART	SM00160	ranbd_3	coord: 19..146 e-value: 3.3E-39 score: 146.2
IPR000156	Ran binding domain	PFAM	PF00638	Ran_BP1	coord: 28..146 e-value: 5.1E-42 score: 143.0
IPR000156	Ran binding domain	PROSITE	PS50196	RANBD1	coord: 12..152 score: 34.126423
IPR011993	PH-like domain superfamily	GENE3D	2.30.29.30		coord: 3..164 e-value: 1.9E-52 score: 179.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 165..209
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 168..209
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33
None	No IPR available	PANTHER	PTHR23138	RAN BINDING PROTEIN	coord: 1..208
None	No IPR available	PANTHER	PTHR23138:SF156	RAN-BINDING PROTEIN 1 HOMOLOG C-LIKE	coord: 1..208
None	No IPR available	CDD	cd13179	RanBD_RanBP1	coord: 25..148 e-value: 6.52319E-65 score: 195.095
None	No IPR available	SUPERFAMILY	50729	PH domain-like	coord: 25..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi08M000404	Bhi08M000404	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046907	intracellular transport
biological_process	GO:0050790	regulation of catalytic activity
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005643	nuclear pore
molecular_function	GO:0005096	GTPase activator activity