Bhi08G000366 (gene) Wax gourd (B227) v1

Overview
NameBhi08G000366
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionMethyltransferase-like protein
Locationchr8: 15296332 .. 15296684 (-)
RNA-Seq ExpressionBhi08G000366
SyntenyBhi08G000366
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTCCGCTGAGATTTATTCTCATATTTCTCTCAGCGACTCTCGCCGGCTTCTTCCTTCTCCGGAATCTCAAATCTCCGTCTCAAGATTTCCAGGCCGACGATAATTCCGATTCCCACTCCAAGGATCTGGATTCCAATTCCTCCTCCTCCTCCTCCTCCAAGGTTCTTCTAATTAATTCTCTTCCATCGGAATAATCTTGCATTTCCTTTTTGTAATTTCTTTGTTTGTGTCTGATCGGAACGATCTGTTTAAACAGCTCTCATCGGGGTTCTGGACGGTGGTCGATATGGCCAGCGGCCGCTACTTGTGGAGGCATTTGTTTTCCTCGTCGGAGAAGCCTTCTGATTGA

mRNA sequence

ATGTGTCCGCTGAGATTTATTCTCATATTTCTCTCAGCGACTCTCGCCGGCTTCTTCCTTCTCCGGAATCTCAAATCTCCGTCTCAAGATTTCCAGGCCGACGATAATTCCGATTCCCACTCCAAGGATCTGGATTCCAATTCCTCCTCCTCCTCCTCCTCCAAGCTCTCATCGGGGTTCTGGACGGTGGTCGATATGGCCAGCGGCCGCTACTTGTGGAGGCATTTGTTTTCCTCGTCGGAGAAGCCTTCTGATTGA

Coding sequence (CDS)

ATGTGTCCGCTGAGATTTATTCTCATATTTCTCTCAGCGACTCTCGCCGGCTTCTTCCTTCTCCGGAATCTCAAATCTCCGTCTCAAGATTTCCAGGCCGACGATAATTCCGATTCCCACTCCAAGGATCTGGATTCCAATTCCTCCTCCTCCTCCTCCTCCAAGCTCTCATCGGGGTTCTGGACGGTGGTCGATATGGCCAGCGGCCGCTACTTGTGGAGGCATTTGTTTTCCTCGTCGGAGAAGCCTTCTGATTGA

Protein sequence

MCPLRFILIFLSATLAGFFLLRNLKSPSQDFQADDNSDSHSKDLDSNSSSSSSSKLSSGFWTVVDMASGRYLWRHLFSSSEKPSD
Homology
BLAST of Bhi08G000366 vs. TAIR 10
Match: AT5G58375.1 (Methyltransferase-related protein )

HSP 1 Score: 79.0 bits (193), Expect = 2.1e-15
Identity = 48/85 (56.47%), Postives = 58/85 (68.24%), Query Frame = 0

Query: 1  MCPLRFILIFLSATLAGFFLLRNLKSPSQDFQADDNSDSHSKDLDSNSS-SSSSSKLSSG 60
          MCPLR ILIFLSATLAGFF+L+ L S S D   D  +D+   D DS S  S     + SG
Sbjct: 1  MCPLRLILIFLSATLAGFFVLQKLNSTSDDPLDDSFTDAEHADDDSVSGFSKVGMAMKSG 60

Query: 61 FWTVVDMASGRYLWRHLFSSSEKPS 85
          FWT VDMASGRYLW +L S++++ S
Sbjct: 61 FWTCVDMASGRYLWNNLCSNAKRSS 85

BLAST of Bhi08G000366 vs. TAIR 10
Match: AT5G18150.1 (Methyltransferase-related protein )

HSP 1 Score: 63.9 bits (154), Expect = 7.0e-11
Identity = 36/82 (43.90%), Postives = 50/82 (60.98%), Query Frame = 0

Query: 1  MCPLRFILIFLSATLAGFFLLRNLKSPSQDFQADDNSDSHSKDLDSNSSSSSSSKLSSGF 60
          MCP+RF+L+F SA LAG+F  + + S S +F + D       +L+     +   K+ +GF
Sbjct: 1  MCPMRFLLVFFSAVLAGYFAWKTVSS-SPEFDSPD-------ELNEKQELNLKKKMENGF 60

Query: 61 WTVVDMASGRYLWRHLFSSSEK 83
          W  VDMASGRYLWR+L    EK
Sbjct: 61 WVFVDMASGRYLWRNLKEMREK 74

BLAST of Bhi08G000366 vs. TAIR 10
Match: AT5G14602.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: Methyltransferase-related protein (TAIR:AT5G18150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 57.4 bits (137), Expect = 6.6e-09
Identity = 34/76 (44.74%), Postives = 47/76 (61.84%), Query Frame = 0

Query: 1  MCPLRFILIFLSATLAGFFLLRNLKSPSQDFQADDNSDSHSKDLDSNSSSSSSSKLSSGF 60
          MCPLRF+L+F SA LAG+   R + S  + F +D+   + +K+           K+ +G 
Sbjct: 1  MCPLRFVLVFFSAVLAGYIAWRTVNSTPELF-SDELLQAEAKE---KQGLDFKRKMDNGL 60

Query: 61 WTVVDMASGRYLWRHL 77
          WT VDMASGRYLWR+L
Sbjct: 61 WTFVDMASGRYLWRNL 72

BLAST of Bhi08G000366 vs. ExPASy TrEMBL
Match: A0A6J1KER9 (uncharacterized protein LOC111492605 OS=Cucurbita maxima OX=3661 GN=LOC111492605 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.6e-26
Identity = 68/86 (79.07%), Postives = 76/86 (88.37%), Query Frame = 0

Query: 1   MCPLRFILIFLSATLAGFFLLRNLKSPSQDFQADDNSDSHSKDLDSNSSSSS-SSKLSSG 60
           MCPLRFILIFLSATLAGFF+LRNLKS  QDF+AD+NSD+HS DL SNS+SS  +S + SG
Sbjct: 68  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFEADENSDAHSNDLSSNSTSSKVTSAMQSG 127

Query: 61  FWTVVDMASGRYLWRHLFSSSEKPSD 86
           FWTVVDMASGRYLWRHLF SS+K SD
Sbjct: 128 FWTVVDMASGRYLWRHLFPSSQKRSD 153

BLAST of Bhi08G000366 vs. ExPASy TrEMBL
Match: A0A1S3BWD8 (uncharacterized protein LOC103494193 OS=Cucumis melo OX=3656 GN=LOC103494193 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 2.1e-26
Identity = 70/85 (82.35%), Postives = 75/85 (88.24%), Query Frame = 0

Query: 1  MCPLRFILIFLSATLAGFFLLRNLKSPSQDFQADDNSDSHSKDLDSNSSSSSSSKLSSGF 60
          MCPLRFILIFLSATLAGFF+LRNLKS  QDF A DNSD  SK+LDS S S+S SK+SSGF
Sbjct: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDSSKELDS-SDSTSCSKVSSGF 60

Query: 61 WTVVDMASGRYLWRHLFSSSEKPSD 86
          WTVVDMASGRYLWRHLF SS+KPSD
Sbjct: 61 WTVVDMASGRYLWRHLFPSSKKPSD 84

BLAST of Bhi08G000366 vs. ExPASy TrEMBL
Match: A0A0A0LV42 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025180 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.3e-25
Identity = 68/85 (80.00%), Postives = 74/85 (87.06%), Query Frame = 0

Query: 1  MCPLRFILIFLSATLAGFFLLRNLKSPSQDFQADDNSDSHSKDLDSNSSSSSSSKLSSGF 60
          MCPLRFILIFLSATLAGFF+LRNLKS  QDF A DNSD +S + DS S SSS SK+SSGF
Sbjct: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDNSNEFDS-SDSSSCSKVSSGF 60

Query: 61 WTVVDMASGRYLWRHLFSSSEKPSD 86
          WT+VDMASGRYLWRHLF SS+KPSD
Sbjct: 61 WTLVDMASGRYLWRHLFPSSKKPSD 84

BLAST of Bhi08G000366 vs. ExPASy TrEMBL
Match: A0A6J1GAZ0 (uncharacterized protein LOC111452533 OS=Cucurbita moschata OX=3662 GN=LOC111452533 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.7e-25
Identity = 66/86 (76.74%), Postives = 76/86 (88.37%), Query Frame = 0

Query: 1  MCPLRFILIFLSATLAGFFLLRNLKSPSQDFQADDNSDSHSKDLDSNSSSSS-SSKLSSG 60
          MCPLRFILIFLSATLAGFF+LRN+KS  QDF+A+DNSD+HS DL SNS+SS  +S + SG
Sbjct: 1  MCPLRFILIFLSATLAGFFVLRNIKSQPQDFEAEDNSDAHSNDLSSNSTSSKVTSAMQSG 60

Query: 61 FWTVVDMASGRYLWRHLFSSSEKPSD 86
          FWTVVDMASGRYLWR+LF SS+K SD
Sbjct: 61 FWTVVDMASGRYLWRNLFPSSQKRSD 86

BLAST of Bhi08G000366 vs. ExPASy TrEMBL
Match: A0A6J1DPZ0 (uncharacterized protein LOC111022014 OS=Momordica charantia OX=3673 GN=LOC111022014 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 5.1e-25
Identity = 66/84 (78.57%), Postives = 73/84 (86.90%), Query Frame = 0

Query: 1  MCPLRFILIFLSATLAGFFLLRNLKSPSQDFQ-ADDNSDSHSKDLDSNSSSSSSSKLSSG 60
          MCPLRFILIFLSATLAGFF+LRNLKS  QDF+ ADDNSD+HS D  +  SS+S+SK+SSG
Sbjct: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFEAADDNSDAHSNDSSAAHSSNSTSKVSSG 60

Query: 61 FWTVVDMASGRYLWRHLFSSSEKP 84
          FWTVVDMASGRYLWRHLF SS  P
Sbjct: 61 FWTVVDMASGRYLWRHLFPSSSSP 84

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT5G58375.12.1e-1556.47Methyltransferase-related protein [more]
AT5G18150.17.0e-1143.90Methyltransferase-related protein [more]
AT5G14602.16.6e-0944.74FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1KER91.6e-2679.07uncharacterized protein LOC111492605 OS=Cucurbita maxima OX=3661 GN=LOC111492605... [more]
A0A1S3BWD82.1e-2682.35uncharacterized protein LOC103494193 OS=Cucumis melo OX=3656 GN=LOC103494193 PE=... [more]
A0A0A0LV421.3e-2580.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025180 PE=4 SV=1[more]
A0A6J1GAZ01.7e-2576.74uncharacterized protein LOC111452533 OS=Cucurbita moschata OX=3662 GN=LOC1114525... [more]
A0A6J1DPZ05.1e-2578.57uncharacterized protein LOC111022014 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..57
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..57
NoneNo IPR availablePANTHERPTHR34132:SF4EXPRESSED PROTEINcoord: 1..84
NoneNo IPR availablePANTHERPTHR34132EMB|CAB87627.1-RELATEDcoord: 1..84

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi08M000366Bhi08M000366mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032259 methylation
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0008168 methyltransferase activity