Bhi08G000043 (gene) Wax gourd (B227) v1

Overview


Name	Bhi08G000043
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Copper ion binding isoform 1
Location	chr8: 1590266 .. 1594053 (-)
RNA-Seq Expression	Bhi08G000043
Synteny	Bhi08G000043

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TACAATTCTCCCAAACTATATAAAGGTGTACGTCTCCAAGCCTGGAACGAGCACAGATTCATTTCTTGAATCGAACGGCTTCAATTGGCGTAATCTCCACACATTTCGCCTTCGGAAATTTTGTATCTACGAACCCCTATTTGACTTCCCAGTTCCTCCCACAGCCGCTACCACCATTTTCTTCCTAAAACTCTCTCTCATTCTTCTTTAGGTAAGTAATTTTCTTCAAGCAATCTTGCATAATTGTTCTATAGGTTTTCCCACTATTGTTATGTTTCGATTCAATCGATCGTATTCCTTTTGTTAGGAAAGGCGATCAATAGAAATGGCAGCAGCTAGGACGGCAGCTAGAATCTTTTCCCGAAGGTTTTCGAGCAGCGGGAAAATACTCAGCGAGGAAGAAAAGGCTGCTGAGAATGTCTACATCAAGGTGCCCATCTAAAGCCTCCGACCTGTCATTTTTAGGTTTTGCATTTTTTTTTTTGTTTTGATCATGTTGGTTGTTCTATAGATTATAATTATAAGCATTGAGATGAATAAAGTATGGCGAATTTGCTTGTTCCCGACGTACAGCTTGCTATTTCTGAGAGATTTTAAATTTCACTCGAGCTCTACACTGTCAAATGAGTCTACTATTGTTTTCTATTTTGGTTAGACTGTTCAATTCTATTCATCCCACAATGTATGAAATGAGAATGATCAGCCGAGAAATGATCAGGATGATTCAAACCAAATGGTACGAAATAGTTTATTCCATTCAAACTTAGACCCTTAACTACTTTCCATACATATTTACTTGGGAAATTTACTGTATGATAAGTGATATACGTAACAAATATGAATTCTTTTCTGGAGTTGTATTAAAAAGATCGTTTCAAAATTTACTGATTGGATCATCGATGGGCATTGAGACAAATAGTCCTCTATTGCAAGTAACGATTGGTGTAAAATGAAAATATTTCAAGTATCGAATATGAATGGAACGGAGTTGATGTGCCCAGTTTTTCTTTTATCTGGAAGGGGATATCTTGTAATCTATCTGGGTTGTCTTGTTTTAATTATGTTTTTGTGGGCTTCTGTGTTTACCGGTACCGGCTGGTGTAGGTCTTGCGTTAGTTATTTGTTTTCTGTTAGTTAATTAGGTTGCTTTAGCTTTTTCTAAATGCCTATGAATATATGGTAGTCTGTTTTTGGCTAATCTTCAATTAAATAAAACAACCAAACTAACAAGTCTACAGTCCTTTAAATTTCTCTACCATTCCATTTTACTTTTATTTAGTATAGGCTCATATCTTCTTTTCTAGTGGGAATGATGGTATTATTGAAGTTGAGGATTGGTTTCTGGATATTACCATAGAGATTCATGACTATGTAATCAAAAGGGCTTCTTCAGTTCTTAATGCTGTTCTATAGTTCTTCATTCACTAGAGTATAATTAAAGGCCTTTTCCAGGTAGTTACACTTTCATTTTTCCAGACATTTTCCAGGTAGAGTATAATACATTTTTTTTTATGTGGAACATTTGTCTAAGCTGAAGCATCAAAGTGCTAAGTCCTGGAGATTTTTCAATGGAAAGAGTTTATTTGTTTCTCTGCATATGAGTGAACATTCCTCCATTACCATCTGCTTGCTTATGTTGTCTTTTTACCTTATTTCCATCAATATTTTATTTAGTTGAGATTTTGCAGAAAATTGAACAAGAGAAACTGGAGAAGCTTGCACGCAAGGTATGCTTGTAGTTCCGTAAAATTTTCATTTGGGAACCTAGAGTTCGACATTATGGGGATTTTGGATAATCTAGCTTTCACACAGTAAAATTTTATGGTTCTCTTAATAGTTGTAAAACTACAACTTAATTTTACTGAAGTAATTTTATATGATTTTGTCTTGGGAGATGAGTATTTATTGGCCCCAAATCACTAAGGTTTACAAGCATAGGTGCGAGAGGAAGAAATAACGAATNGTCCATTTATATTCTGTTACCTCCTGTTAGTAGAATTTGGTTGGGAAGAGTTTTTGCTGAAGTTGATTTAAGGGTAGAGCGTTTTGAGTTGGAGGTATCGCTGGCTGTATTTTCTGTTGAGTTCTCTTGGGAGAAATTGAGAGAGATGGGAAGCTCTCGAAACTTTCCATGATATATGTTGATAAATAAAATTGGTAGATGACTTCTATCACACATCTAGGTCTATGGTAATATAGTTTTCTTTTCTCTTCTTCTTCTTCTTCTTTTATTTTTTATTTTTTTTGAGTGAGAGCTATATATTCTAATCTTCTCTAGGCTACAAATGCATATATTTCTAGGGACCTAAACCAGAAGAAAAGCTAGAAGGGTCAGTAGCTGGTTCCGTTCCAAGTGGCTCAGCCTCAGCACCATCAGGAGCATCAACAGAGAAAATATCTAGTGACAAACACCGCAATTATGCTGTTGTAGCTGGAACTGTAACTATTCTTGGTGCTCTTGGATGGTATCTTAAGTCTAAAAAGAAGCCAGAAGAAGTCCATGATTGAGTTAACAAATGACGTCGTTTTCATATCATCGGCATCTGAAGCATGGGGGAAGGTGAGTGTTCTCCTTTCCTCTGGTTAATAAACCAAAAATCGAGATGCGTATGGATCTTGGTTAATGAATACGTTATGTTCACATGTACGTTTCTCTTGGCATTATTTCTGTTTACTTTCCTGGAAAATTAACCCCAAGAGACAGTGACAGCATGGAGCATGCTCTATGACAAAGACTTGGTTTGTTTGATTTCAATTTCACATTCTCTTCAATAATATTGAGTAGAAGAATTATTTTGAAGCATGCACGCTATAATCACTGTTAAATACTTTTCCTTGTATTTTAAAGAAAGAAAAAAGGTCAAAATCATCTGTGTTAATCTTAAACTACTATGATCCATAAAGAAGTTGGAATATCCCTGATTTGTTTCAACTCTGTTTTCTCGTCTTCTAGTGTTCTTGCTTTTACGTCTCAGTGTAATTTAAGCTAAAGTACTTTTTTTATTTAAAAAAAGTTGGGGAGAAAAATATTGGCTACTAAAGGTGTATAGACCAGTACCATTTACAATGATATGGGAAATTTTACGGTACTATGGATAATTTTTACTCCGGTTTTCAGTTGTATAAACGCATTATTGAGGTCATATTTGATTTATTTGAGTTTCATTTGGTAATCATTTTGTTTGATTATTAGTTTGTTTTAGTTTTTGAATTTGATTAAGAATTTAACTCTTGTATGGAAAGAAATTGAAGAAAATTTTTAAATTCAAATGATTATAAATGAGTTCTAAGTTAGTTCTTTTATGGTGGTAAGACAGCATAGACATGCCTCAGATTGTATGGGAAATCAGTTGTTGTGTCATGTCAAGTCGCACCCTATGGAGCTTCCTTCTTTGGCTTTGTTATTGTTCCAATTAATTTCTACCATATTTTATTCAAGCCTCTTAATTGACCTCTAATGTCAAGTGTCTCTGATAGCTTTACTAGTTTATGTAGTGGTTGACCTAATAGAAACGTGGCCAGAAACGACTAGTTGCTCCTTCAATACCTCTTGACATAGTTATGAGAGATTCATGTGAAGGATTAATAATACGAATTCTTACGAGACACCTTAACGAAATTTTGACGAATTGACTCCAAAAACTGGAAATTTGGGCCTCAAAGGAGTGATTCCCAATTAAGGTTGTATCATTTTGTTCTTTTTGTTATCATCTCGTTAAAATTATGATATAAGGAAAATTTTCTCAAATTCATCTTAACCTCTCTTTTATTTTCATGAGATGTTTTCT

mRNA sequence

TACAATTCTCCCAAACTATATAAAGGTGTACGTCTCCAAGCCTGGAACGAGCACAGATTCATTTCTTGAATCGAACGGCTTCAATTGGCGTAATCTCCACACATTTCGCCTTCGGAAATTTTGTATCTACGAACCCCTATTTGACTTCCCAGTTCCTCCCACAGCCGCTACCACCATTTTCTTCCTAAAACTCTCTCTCATTCTTCTTTAGGAAAGGCGATCAATAGAAATGGCAGCAGCTAGGACGGCAGCTAGAATCTTTTCCCGAAGGTTTTCGAGCAGCGGGAAAATACTCAGCGAGGAAGAAAAGGCTGCTGAGAATGTCTACATCAAGAAAATTGAACAAGAGAAACTGGAGAAGCTTGCACGCAAGGGACCTAAACCAGAAGAAAAGCTAGAAGGGTCAGTAGCTGGTTCCGTTCCAAGTGGCTCAGCCTCAGCACCATCAGGAGCATCAACAGAGAAAATATCTAGTGACAAACACCGCAATTATGCTGTTGTAGCTGGAACTGTAACTATTCTTGGTGCTCTTGGATGGTATCTTAAGTCTAAAAAGAAGCCAGAAGAAGTCCATGATTGAGTTAACAAATGACGTCGTTTTCATATCATCGGCATCTGAAGCATGGGGGAAGGTGAGTGTTCTCCTTTCCTCTGGTTAATAAACCAAAAATCGAGATGCGTATGGATCTTGGTTAATGAATACGTTATGTTCACATGTACGTTTCTCTTGGCATTATTTCTGTTTACTTTCCTGGAAAATTAACCCCAAGAGACAGTGACAGCATGGAGCATGCTCTATGACAAAGACTTGGTTTGTTTGATTTCAATTTCACATTCTCTTCAATAATATTGAGTAGAAGAATTATTTTGAAGCATGCACGCTATAATCACTGTTAAATACTTTTCCTTGTATTTTAAAGAAAGAAAAAAGGTCAAAATCATCTGTGTTAATCTTAAACTACTATGATCCATAAAGAAGTTGGAATATCCCTGATTTGTTTCAACTCTGTTTTCTCGTCTTCTAGTGTTCTTGCTTTTACGTCTCAGTGTAATTTAAGCTAAAGTACTTTTTTTATTTAAAAAAAGTTGGGGAGAAAAATATTGGCTACTAAAGGTGTATAGACCAGTACCATTTACAATGATATGGGAAATTTTACGGTACTATGGATAATTTTTACTCCGGTTTTCAGTTGTATAAACGCATTATTGAGGTCATATTTGATTTATTTGAGTTTCATTTGGTAATCATTTTGTTTGATTATTAGTTTGTTTTAGTTTTTGAATTTGATTAAGAATTTAACTCTTGTATGGAAAGAAATTGAAGAAAATTTTTAAATTCAAATGATTATAAATGAGTTCTAAGTTAGTTCTTTTATGGTGGTAAGACAGCATAGACATGCCTCAGATTGTATGGGAAATCAGTTGTTGTGTCATGTCAAGTCGCACCCTATGGAGCTTCCTTCTTTGGCTTTGTTATTGTTCCAATTAATTTCTACCATATTTTATTCAAGCCTCTTAATTGACCTCTAATGTCAAGTGTCTCTGATAGCTTTACTAGTTTATGTAGTGGTTGACCTAATAGAAACGTGGCCAGAAACGACTAGTTGCTCCTTCAATACCTCTTGACATAGTTATGAGAGATTCATGTGAAGGATTAATAATACGAATTCTTACGAGACACCTTAACGAAATTTTGACGAATTGACTCCAAAAACTGGAAATTTGGGCCTCAAAGGAGTGATTCCCAATTAAGGTTGTATCATTTTGTTCTTTTTGTTATCATCTCGTTAAAATTATGATATAAGGAAAATTTTCTCAAATTCATCTTAACCTCTCTTTTATTTTCATGAGATGTTTTCT

Coding sequence (CDS)

ATGGCAGCAGCTAGGACGGCAGCTAGAATCTTTTCCCGAAGGTTTTCGAGCAGCGGGAAAATACTCAGCGAGGAAGAAAAGGCTGCTGAGAATGTCTACATCAAGAAAATTGAACAAGAGAAACTGGAGAAGCTTGCACGCAAGGGACCTAAACCAGAAGAAAAGCTAGAAGGGTCAGTAGCTGGTTCCGTTCCAAGTGGCTCAGCCTCAGCACCATCAGGAGCATCAACAGAGAAAATATCTAGTGACAAACACCGCAATTATGCTGTTGTAGCTGGAACTGTAACTATTCTTGGTGCTCTTGGATGGTATCTTAAGTCTAAAAAGAAGCCAGAAGAAGTCCATGATTGA

Protein sequence

MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIKKIEQEKLEKLARKGPKPEEKLEGSVAGSVPSGSASAPSGASTEKISSDKHRNYAVVAGTVTILGALGWYLKSKKKPEEVHD

Homology

[Close]

BLAST of Bhi08G000043 vs. TAIR 10
Match: AT2G27730.1 (copper ion binding )

HSP 1 Score: 113.2 bits (282), Expect = 1.4e-25
Identity = 67/112 (59.82%), Postives = 87/112 (77.68%), Query Frame = 0


Query: 3   AARTAARIFSRRFSSSGKILSEEEKAAENVYIKKIEQEKLEKLARKGPKPEEKLEGSVAG 62
           A R A RI SRRF SSGK+LSEEE+AAENV+IKK+EQEKL+KLAR+G  P E+  GS + 
Sbjct: 2   ATRNALRIVSRRF-SSGKVLSEEERAAENVFIKKMEQEKLQKLARQG--PGEQAAGSASE 61

Query: 63  SVPSGSASAPSGASTEKISSDKHRNYAVVAGTVTILGALGWYLKS--KKKPE 113
           +  +G+ ++ S  S  K+S DK+RNYAVVAG V I+G++GWYLK+  KK+PE
Sbjct: 62  AKVAGATASASAESGPKVSEDKNRNYAVVAGVVAIVGSIGWYLKAGGKKQPE 110

[Close]

BLAST of Bhi08G000043 vs. ExPASy Swiss-Prot
Match: Q9ZUX4 (Uncharacterized protein At2g27730, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g27730 PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 1.9e-24
Identity = 67/112 (59.82%), Postives = 87/112 (77.68%), Query Frame = 0


Query: 3   AARTAARIFSRRFSSSGKILSEEEKAAENVYIKKIEQEKLEKLARKGPKPEEKLEGSVAG 62
           A R A RI SRRF SSGK+LSEEE+AAENV+IKK+EQEKL+KLAR+G  P E+  GS + 
Sbjct: 2   ATRNALRIVSRRF-SSGKVLSEEERAAENVFIKKMEQEKLQKLARQG--PGEQAAGSASE 61

Query: 63  SVPSGSASAPSGASTEKISSDKHRNYAVVAGTVTILGALGWYLKS--KKKPE 113
           +  +G+ ++ S  S  K+S DK+RNYAVVAG V I+G++GWYLK+  KK+PE
Sbjct: 62  AKVAGATASASAESGPKVSEDKNRNYAVVAGVVAIVGSIGWYLKAGGKKQPE 110

[Close]

BLAST of Bhi08G000043 vs. ExPASy TrEMBL
Match: A0A6J1HVU8 (uncharacterized protein At2g27730, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111466619 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 2.7e-45
Identity = 104/116 (89.66%), Postives = 108/116 (93.10%), Query Frame = 0


Query: 1   MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIKKIEQEKLEKLARKGPKPEEKLEGSV 60
           MAAARTAARIFSRRFS SGKILSEEEKAAEN+YIKK EQEKLEKLARKGPKPEEK   SV
Sbjct: 1   MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKPVESV 60

Query: 61  AGSVPSGSASAPSGASTEKISSDKHRNYAVVAGTVTILGALGWYLKSKKKPEEVHD 117
           A S+PSGSAS+ SGASTEKISSDK+RNYAVVAGTVTI GALGWYLKSKKKPEEVHD
Sbjct: 61  AESIPSGSASSASGASTEKISSDKYRNYAVVAGTVTIFGALGWYLKSKKKPEEVHD 116

[Close]

BLAST of Bhi08G000043 vs. ExPASy TrEMBL
Match: A0A6J1G0C8 (uncharacterized protein At2g27730, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111449519 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 3.5e-45
Identity = 104/116 (89.66%), Postives = 108/116 (93.10%), Query Frame = 0


Query: 1   MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIKKIEQEKLEKLARKGPKPEEKLEGSV 60
           MAAARTAARIFSRRFS SGKILSEEEKAAEN+YIKK EQEKLEKLARKGPKPEEK   SV
Sbjct: 1   MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKPVESV 60

Query: 61  AGSVPSGSASAPSGASTEKISSDKHRNYAVVAGTVTILGALGWYLKSKKKPEEVHD 117
           A S+PSGSAS+ SGASTEKISSDK+RNYAVVAGTVTI GALGWYLKSKKKPEEVHD
Sbjct: 61  AESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGALGWYLKSKKKPEEVHD 116

[Close]

BLAST of Bhi08G000043 vs. ExPASy TrEMBL
Match: A0A6J1CMV3 (uncharacterized protein At2g27730, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111012716 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.5e-43
Identity = 104/117 (88.89%), Postives = 107/117 (91.45%), Query Frame = 0


Query: 1   MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIKKIEQEKLEKLARKGPKPEEKLEGSV 60
           MAAARTAARI SRRFSSSGKILSEEEKAAENVYIKK EQEKLEKLARKGPKPEEK  GS 
Sbjct: 1   MAAARTAARIVSRRFSSSGKILSEEEKAAENVYIKKTEQEKLEKLARKGPKPEEKPGGSA 60

Query: 61  AGSVPSGSASA-PSGASTEKISSDKHRNYAVVAGTVTILGALGWYLKSKKKPEEVHD 117
           A S+PSGSASA  SGAS EKIS+DKHRNYAVVAGTVTILGA+GWYLKSKKKPEEV D
Sbjct: 61  ADSIPSGSASASASGASAEKISTDKHRNYAVVAGTVTILGAVGWYLKSKKKPEEVQD 117

[Close]

BLAST of Bhi08G000043 vs. ExPASy TrEMBL
Match: A0A0A0LT33 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G165210 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.9e-43
Identity = 103/117 (88.03%), Postives = 108/117 (92.31%), Query Frame = 0


Query: 1   MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIKKIEQEKLEKLARKGPKPEEKLEGSV 60
           MAAARTAARIFSRRFSS GKILSEEEKAAEN+YIKK EQEKLEKLARKGPKPEEKL  SV
Sbjct: 1   MAAARTAARIFSRRFSSGGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKLGESV 60

Query: 61  AGSVPSGSASAPSGA-STEKISSDKHRNYAVVAGTVTILGALGWYLKSKKKPEEVHD 117
           A SVPS S+++ SGA STEKIS+DK RNYAVVAGTVTILGALGWYLKSKKKPEEVHD
Sbjct: 61  ADSVPSSSSASASGASSTEKISTDKQRNYAVVAGTVTILGALGWYLKSKKKPEEVHD 117

[Close]

BLAST of Bhi08G000043 vs. ExPASy TrEMBL
Match: A0A5A7T219 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G002960 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 4.3e-43
Identity = 105/125 (84.00%), Postives = 109/125 (87.20%), Query Frame = 0


Query: 1   MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIKKIEQEKLEKLARKGPKPEEKLEGSV 60
           MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIKK EQEKLEKLARKGPKPEEK+  SV
Sbjct: 1   MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIKKTEQEKLEKLARKGPKPEEKIGESV 60

Query: 61  AGSVPSGSAS---------APSGASTEKISSDKHRNYAVVAGTVTILGALGWYLKSKKKP 117
           A SVPS SAS         + SGAS+EKIS+DK RNYAVVAGTVTILGALGWYLKSKKKP
Sbjct: 61  ADSVPSSSASGSSSASASASASGASSEKISTDKQRNYAVVAGTVTILGALGWYLKSKKKP 120

The following BLAST results are available for this feature:

BLAST of Bhi08G000043 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G27730.1	1.4e-25	59.82	copper ion binding	[more]

BLAST of Bhi08G000043 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZUX4	1.9e-24	59.82	Uncharacterized protein At2g27730, mitochondrial OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of Bhi08G000043 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HVU8	2.7e-45	89.66	uncharacterized protein At2g27730, mitochondrial OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1G0C8	3.5e-45	89.66	uncharacterized protein At2g27730, mitochondrial OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1CMV3	1.5e-43	88.89	uncharacterized protein At2g27730, mitochondrial OS=Momordica charantia OX=3673 ...	[more]
A0A0A0LT33	1.9e-43	88.03	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G165210 PE=4 SV=1	[more]
A0A5A7T219	4.3e-43	84.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..78
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..83
None	No IPR available	PANTHER	PTHR33878	OS08G0559000 PROTEIN	coord: 2..116
None	No IPR available	PANTHER	PTHR33878:SF1	OS08G0559000 PROTEIN	coord: 2..116

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi08M000043	Bhi08M000043	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005747	mitochondrial respiratory chain complex I