Bhi08G000012 (gene) Wax gourd (B227) v1

Overview
NameBhi08G000012
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionUnknown protein
Locationchr8: 265822 .. 266175 (+)
RNA-Seq ExpressionBhi08G000012
SyntenyBhi08G000012
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCCACCCCCCGCACACCGAGGCCGGGGCAAGGGGCAGGCAGATTCATTTCAAGTTCCTTGGCGCGACCTGCGCCGGGGTTTGGTTTAAGCGCGTCGAGGGGGAGGGGGGCAGGCAAAGAGCATGCTTCCCCCCCGCCCTCGACGCGAACAGTTTGTTCTTAAACGTGTTCGCGGGTCGTTTATGTTTAGGCATCAACAATGATCCTTCCGCAGGTTCACCTACGGAAACCTTGTTACGACTTCTCCTTCCTCTAAATGATAAGGTTCAGTGGACTTCTCGCGACGTCGCGGGCAGCGAACCGCCCACGTCGCCGCGATCCGAAAACTTCACCGGACCATTCAATCGGTAG

mRNA sequence

ATGCTCCACCCCCCGCACACCGAGGCCGGGGCAAGGGGCAGGCAGATTCATTTCAAGTTCCTTGGCGCGACCTGCGCCGGGGTTTGGTTTAAGCGCGTCGAGGGGGAGGGGGGCAGGCAAAGAGCATGCTTCCCCCCCGCCCTCGACGCGAACAGTTTGTTCTTAAACGTGTTCGCGGGTCGTTTATGTTTAGGCATCAACAATGATCCTTCCGCAGGTTCACCTACGGAAACCTTGTTACGACTTCTCCTTCCTCTAAATGATAAGGTTCAGTGGACTTCTCGCGACGTCGCGGGCAGCGAACCGCCCACGTCGCCGCGATCCGAAAACTTCACCGGACCATTCAATCGGTAG

Coding sequence (CDS)

ATGCTCCACCCCCCGCACACCGAGGCCGGGGCAAGGGGCAGGCAGATTCATTTCAAGTTCCTTGGCGCGACCTGCGCCGGGGTTTGGTTTAAGCGCGTCGAGGGGGAGGGGGGCAGGCAAAGAGCATGCTTCCCCCCCGCCCTCGACGCGAACAGTTTGTTCTTAAACGTGTTCGCGGGTCGTTTATGTTTAGGCATCAACAATGATCCTTCCGCAGGTTCACCTACGGAAACCTTGTTACGACTTCTCCTTCCTCTAAATGATAAGGTTCAGTGGACTTCTCGCGACGTCGCGGGCAGCGAACCGCCCACGTCGCCGCGATCCGAAAACTTCACCGGACCATTCAATCGGTAG

Protein sequence

MLHPPHTEAGARGRQIHFKFLGATCAGVWFKRVEGEGGRQRACFPPALDANSLFLNVFAGRLCLGINNDPSAGSPTETLLRLLLPLNDKVQWTSRDVAGSEPPTSPRSENFTGPFNR
Homology
BLAST of Bhi08G000012 vs. ExPASy Swiss-Prot
Match: P0C5Q0 (Putative uncharacterized protein YLR154W-F OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=YLR154W-F PE=5 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.0e-04
Identity = 22/27 (81.48%), Postives = 24/27 (88.89%), Query Frame = 0

Query: 64 LGINNDPSAGSPTETLLRLLLPLNDKV 91
          L   NDPSAGSPTETLLRLL+PLND+V
Sbjct: 14 LNFFNDPSAGSPTETLLRLLVPLNDQV 40

BLAST of Bhi08G000012 vs. ExPASy TrEMBL
Match: A0A2G2UW97 (Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_35341 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 9.7e-27
Identity = 75/122 (61.48%), Postives = 80/122 (65.57%), Query Frame = 0

Query: 4   PPHTEAGARGRQIHFKFLGATCA----GVWFKRVEGEGGRQRACF---PPALDANSLFLN 63
           P H   GARG    FK+  A  A    G    R  G GG  RA F   PPA       +N
Sbjct: 17  PTHAADGARGAGYRFKYSLALSALGFVGRPPARAPGTGGGARAEFRSTPPA--RTPQLVN 76

Query: 64  VFAGRL-CLGINNDPSAGSPTETLLRLLLPLNDKVQWTSRDVAGSEPPTSPRSENFTGPF 118
           +FAG   C G +NDPSAGSPTETLLRLLLPLNDKVQWTSRDVAGSEPPTSPRSE+FTG F
Sbjct: 77  MFAGAFCCAGFDNDPSAGSPTETLLRLLLPLNDKVQWTSRDVAGSEPPTSPRSEHFTGSF 136

BLAST of Bhi08G000012 vs. ExPASy TrEMBL
Match: A0A2G2UXF0 (Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_34937 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 2.2e-26
Identity = 76/119 (63.87%), Postives = 79/119 (66.39%), Query Frame = 0

Query: 10  GARGRQIHFKFLGATCAGVWFK-------RVEGEGGRQRA---CFPPALDANSLFLNVFA 69
           GARGR     FLGA  AGV +        R  G GG  RA     PPA       LN FA
Sbjct: 60  GARGRLSIQVFLGAFRAGVRWSPAALAGVRASGMGGGARAECRSTPPARAPR--LLNAFA 119

Query: 70  GRL-CLGINNDPSAGSPTETLLRLLLPLNDKVQWTSRDVAGSEPPTSPRSENFTGPFNR 118
           G   C G +NDPSAGSPTETLLRLLLPLNDKVQWTSRDVAGSEPPTSPRSE+FTG FNR
Sbjct: 120 GSFCCAGFDNDPSAGSPTETLLRLLLPLNDKVQWTSRDVAGSEPPTSPRSEHFTGSFNR 176

BLAST of Bhi08G000012 vs. ExPASy TrEMBL
Match: A0A2G3AST5 (Uncharacterized protein OS=Capsicum chinense OX=80379 GN=BC332_33808 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 4.8e-26
Identity = 75/115 (65.22%), Postives = 78/115 (67.83%), Query Frame = 0

Query: 10  GARGRQIHFKFLGATCAGVWFK---RVEGEGGRQRA---CFPPALDANSLFLNVFAGRL- 69
           GARGR     FLG   AGV +    R  G GG  RA     PPA    S  LN F G L 
Sbjct: 383 GARGRLSIQVFLGVFRAGVRWSPGVRAPGMGGGARAECRSTPPA--RTSQLLNTFTGSLC 442

Query: 70  CLGINNDPSAGSPTETLLRLLLPLNDKVQWTSRDVAGSEPPTSPRSENFTGPFNR 118
           C G +NDPSAGSPTETLLRLLLPLNDKVQWTSRDVAGSEPPTS RSE+FTG FNR
Sbjct: 443 CAGFDNDPSAGSPTETLLRLLLPLNDKVQWTSRDVAGSEPPTSTRSEHFTGSFNR 495

BLAST of Bhi08G000012 vs. ExPASy TrEMBL
Match: A0A2G2UVS5 (Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_35489 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 6.3e-26
Identity = 75/119 (63.03%), Postives = 79/119 (66.39%), Query Frame = 0

Query: 10  GARGRQIHFKFLGATCAGVWFK-------RVEGEGGRQRA---CFPPALDANSLFLNVFA 69
           G+RGR     FLGA  AGV +        R  G GG  RA     PPA       LN FA
Sbjct: 60  GSRGRLSIQVFLGAFRAGVRWSPAARTGARPPGTGGGARAECRSTPPA--RTPQLLNTFA 119

Query: 70  GRL-CLGINNDPSAGSPTETLLRLLLPLNDKVQWTSRDVAGSEPPTSPRSENFTGPFNR 118
           G   C G +NDPSAGSPTETLLRLLLPLNDKVQWTSRDVAGSEPPTSPRSE+FTG FNR
Sbjct: 120 GSFCCAGFDNDPSAGSPTETLLRLLLPLNDKVQWTSRDVAGSEPPTSPRSEHFTGSFNR 176

BLAST of Bhi08G000012 vs. ExPASy TrEMBL
Match: A0A2G2UZY9 (Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_34096 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 8.2e-26
Identity = 72/120 (60.00%), Postives = 77/120 (64.17%), Query Frame = 0

Query: 4   PPHTEAGARGRQIHFKFLGATCA----GVWFKRVEGEGGRQRACFPPALDANS-LFLNVF 63
           P H + GA G    FK+     A    G    R  G GG  RA     L A +   LN F
Sbjct: 42  PTHAKDGALGEVYRFKYSLVLSAPGFVGRLPARAPGTGGGARAECRSTLPARAPRLLNAF 101

Query: 64  AGRL-CLGINNDPSAGSPTETLLRLLLPLNDKVQWTSRDVAGSEPPTSPRSENFTGPFNR 118
           AG   C G +NDPSAGSPTETLLRLLLPLNDKVQWTSRDVAGSEPPTSPRSE+FTG FNR
Sbjct: 102 AGSFCCAGFDNDPSAGSPTETLLRLLLPLNDKVQWTSRDVAGSEPPTSPRSEHFTGSFNR 161

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
P0C5Q01.0e-0481.48Putative uncharacterized protein YLR154W-F OS=Saccharomyces cerevisiae (strain A... [more]
Match NameE-valueIdentityDescription
A0A2G2UW979.7e-2761.48Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_35341 PE=4 SV=1[more]
A0A2G2UXF02.2e-2663.87Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_34937 PE=4 SV=1[more]
A0A2G3AST54.8e-2665.22Uncharacterized protein OS=Capsicum chinense OX=80379 GN=BC332_33808 PE=4 SV=1[more]
A0A2G2UVS56.3e-2663.03Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_35489 PE=4 SV=1[more]
A0A2G2UZY98.2e-2660.00Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_34096 PE=4 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 94..117

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi08M000012Bhi08M000012mRNA