Bhi08G000008 (gene) Wax gourd (B227) v1

Overview
NameBhi08G000008
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionProtein TAR1
Locationchr8: 253505 .. 253720 (+)
RNA-Seq ExpressionBhi08G000008
SyntenyBhi08G000008
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGCCCCCGCCTGCACAACGAGTTGTGTGGAGGGGGGCAGCGATGCGTGACGCCCAGGCAGACGTGCCCTCGGCCAGAAGGCTCCGGGCGCAACTTGCGTTCAAAGACTCGGTGGTTCGCGGGATCCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCGATGCAAGAGCCGAGATATCTGTTGCCAAGAGTCTTTATGAGTAA

mRNA sequence

ATGTGCCCCCGCCTGCACAACGAGTTGTGTGGAGGGGGGCAGCGATGCGTGACGCCCAGGCAGACGTGCCCTCGGCCAGAAGGCTCCGGGCGCAACTTGCGTTCAAAGACTCGGTGGTTCGCGGGATCCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCGATGCAAGAGCCGAGATATCTGTTGCCAAGAGTCTTTATGAGTAA

Coding sequence (CDS)

ATGTGCCCCCGCCTGCACAACGAGTTGTGTGGAGGGGGGCAGCGATGCGTGACGCCCAGGCAGACGTGCCCTCGGCCAGAAGGCTCCGGGCGCAACTTGCGTTCAAAGACTCGGTGGTTCGCGGGATCCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCGATGCAAGAGCCGAGATATCTGTTGCCAAGAGTCTTTATGAGTAA

Protein sequence

MCPRLHNELCGGGQRCVTPRQTCPRPEGSGRNLRSKTRWFAGSCNSHQVSHFATFFIDARAEISVAKSLYE
Homology
BLAST of Bhi08G000008 vs. ExPASy TrEMBL
Match: A0A2G2UVP5 (Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_35538 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 5.7e-22
Identity = 52/67 (77.61%), Postives = 55/67 (82.09%), Query Frame = 0

Query: 4   RLHNELCGGGQRCVTPRQTCPRPEGSGRNLRSKTRWFAGSCNSHQVSHFATFFIDARAEI 63
           R+    C G  RCV PRQTCPRP G GRNLRSKTRWF G CNSHQVSHFATFFIDARAEI
Sbjct: 43  RMIEARCEGAMRCVMPRQTCPRPNGFGRNLRSKTRWFTGFCNSHQVSHFATFFIDARAEI 102

Query: 64  SVAKSLY 71
           SVA+SL+
Sbjct: 103 SVAESLF 109

BLAST of Bhi08G000008 vs. ExPASy TrEMBL
Match: A0A498KVD0 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_018954 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 7.5e-22
Identity = 52/64 (81.25%), Postives = 56/64 (87.50%), Query Frame = 0

Query: 8   ELCGGGQRCVTPRQTCPRPEGSGRNLRSKTRWFAGSCNSHQVSHFATFFIDARAEISVAK 67
           E C GGQR VTPRQ CPRP+G GRNLRSKTRWF G CNSHQVSHFATFFIDARAEISVA+
Sbjct: 219 EGCAGGQRRVTPRQACPRPDGFGRNLRSKTRWFTGFCNSHQVSHFATFFIDARAEISVAE 278

Query: 68  SLYE 72
           S ++
Sbjct: 279 SRFD 282

BLAST of Bhi08G000008 vs. ExPASy TrEMBL
Match: A0A498KPY0 (Uncharacterized protein (Fragment) OS=Malus domestica OX=3750 GN=DVH24_023837 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.7e-21
Identity = 51/62 (82.26%), Postives = 55/62 (88.71%), Query Frame = 0

Query: 10  CGGGQRCVTPRQTCPRPEGSGRNLRSKTRWFAGSCNSHQVSHFATFFIDARAEISVAKSL 69
           C GGQR VTPRQ CPRP+G GRNLRSKTRWF G CNSHQVSHFATFFIDARAEISVA+S 
Sbjct: 321 CAGGQRRVTPRQACPRPDGFGRNLRSKTRWFTGFCNSHQVSHFATFFIDARAEISVAESR 380

Query: 70  YE 72
           ++
Sbjct: 381 FD 382

BLAST of Bhi08G000008 vs. ExPASy TrEMBL
Match: A0A2G2UX21 (Protein TAR1 OS=Capsicum baccatum OX=33114 GN=CQW23_35082 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.8e-21
Identity = 51/59 (86.44%), Postives = 52/59 (88.14%), Query Frame = 0

Query: 10 CGGGQRCVTPRQTCPRPEGSGRNLRSKTRWFAGSCNSHQVSHFATFFIDARAEISVAKS 69
          C G  RCVTPRQTCPRP G GRNLRSKTRWF G CNSHQVSHFATFFIDARAEISVA+S
Sbjct: 36 CEGATRCVTPRQTCPRPNGFGRNLRSKTRWFTGFCNSHQVSHFATFFIDARAEISVAES 94

BLAST of Bhi08G000008 vs. ExPASy TrEMBL
Match: A0A4U5N7X5 (Uncharacterized protein OS=Populus alba OX=43335 GN=D5086_0000283010 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.8e-21
Identity = 51/57 (89.47%), Postives = 53/57 (92.98%), Query Frame = 0

Query: 12  GGQRCVTPRQTCPRPEGSGRNLRSKTRWFAGSCNSHQVSHFATFFIDARAEISVAKS 69
           GG+RCVTPRQTCPRP G GRNLRSKTRWF G CNSHQVSHFATFFIDARAEISVA+S
Sbjct: 375 GGRRCVTPRQTCPRPGGLGRNLRSKTRWFTGFCNSHQVSHFATFFIDARAEISVAES 431

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2G2UVP55.7e-2277.61Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_35538 PE=4 SV=1[more]
A0A498KVD07.5e-2281.25Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_018954 PE=4 SV=1[more]
A0A498KPY01.7e-2182.26Uncharacterized protein (Fragment) OS=Malus domestica OX=3750 GN=DVH24_023837 PE... [more]
A0A2G2UX212.8e-2186.44Protein TAR1 OS=Capsicum baccatum OX=33114 GN=CQW23_35082 PE=4 SV=1[more]
A0A4U5N7X52.8e-2189.47Uncharacterized protein OS=Populus alba OX=43335 GN=D5086_0000283010 PE=4 SV=1[more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi08M000008Bhi08M000008mRNA