Bhi08G000007 (gene) Wax gourd (B227) v1

Overview
NameBhi08G000007
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionReverse transcriptase domain-containing protein
Locationchr8: 252780 .. 253260 (+)
RNA-Seq ExpressionBhi08G000007
SyntenyBhi08G000007
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ACAGGCGTAACAAAGGCCTGGGCGTAGGCCGCCGTCTCAATCCGCATCGTCCATGCCCCAAGTCGATCGGCGGACCGGCTTGTCACCGTTCCACATCCGACTGGGGCACATCGCCGGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTATTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTCGCCCATATTTAGCCTTGGACAGAATTTACCGCCCGATTGGGGCTGCATTCCCAAACAACCCGACTCGTTGACAGCGCCTCGTGGTGCGACAGGGTCCAAGCGCAACGGGGCTCTCACCCTCTCTGGCGCCCCCTTCCAGGGGACTTGTGCCCGGTCCGCCGCTGAGGAGGGTTCTCCACACTACAATTCGAACATTGAGGACGCCCGATTTTCAACTGGGCTCTTCCCGATTCGCTCGCCGTTACTAGGGGAATCCTGGTAA

mRNA sequence

ACAGGCGTAACAAAGGCCTGGGCGTAGGCCGCCGTCTCAATCCGCATCGTCCATGCCCCAAGTCGATCGGCGGACCGGCTTGTCACCGTTCCACATCCGACTGGGGCACATCGCCGGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTATTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTCGCCCATATTTAGCCTTGGACAGAATTTACCGCCCGATTGGGGCTGCATTCCCAAACAACCCGACTCGTTGACAGCGCCTCGTGGTGCGACAGGGTCCAAGCGCAACGGGGCTCTCACCCTCTCTGGCGCCCCCTTCCAGGGGACTTGTGCCCGGTCCGCCGCTGAGGAGGGTTCTCCACACTACAATTCGAACATTGAGGACGCCCGATTTTCAACTGGGCTCTTCCCGATTCGCTCGCCGTTACTAGGGGAATCCTGGTAA

Coding sequence (CDS)

ATGCCCCAAGTCGATCGGCGGACCGGCTTGTCACCGTTCCACATCCGACTGGGGCACATCGCCGGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTATTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTCGCCCATATTTAGCCTTGGACAGAATTTACCGCCCGATTGGGGCTGCATTCCCAAACAACCCGACTCGTTGACAGCGCCTCGTGGTGCGACAGGGTCCAAGCGCAACGGGGCTCTCACCCTCTCTGGCGCCCCCTTCCAGGGGACTTGTGCCCGGTCCGCCGCTGAGGAGGGTTCTCCACACTACAATTCGAACATTGAGGACGCCCGATTTTCAACTGGGCTCTTCCCGATTCGCTCGCCGTTACTAGGGGAATCCTGGTAA

Protein sequence

MPQVDRRTGLSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSKRNGALTLSGAPFQGTCARSAAEEGSPHYNSNIEDARFSTGLFPIRSPLLGESW
Homology
BLAST of Bhi08G000007 vs. ExPASy TrEMBL
Match: A0A0A0KEK9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G239680 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.2e-63
Identity = 120/132 (90.91%), Postives = 125/132 (94.70%), Query Frame = 0

Query: 1   MPQVDRRTGLSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFS 60
           MPQVD RTG SPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFS
Sbjct: 1   MPQVDWRTGSSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFS 60

Query: 61  LGQNLPPDWGCIPKQPDSLTAPRGATGSKRNGALTLSGAPFQGTCARSAAEEGSPHYNSN 120
           LGQNLPPDWGCIPKQPDSLTAPRGATGS+RNGALTLSGAPFQGTCARSAAE+ SP YNSN
Sbjct: 61  LGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAPFQGTCARSAAEDASPDYNSN 120

Query: 121 IEDARFSTGLFP 133
           ++DARFS+   P
Sbjct: 121 VDDARFSSWALP 132

BLAST of Bhi08G000007 vs. ExPASy TrEMBL
Match: A0A5A7VB87 (Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold869G00010 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 2.1e-63
Identity = 120/132 (90.91%), Postives = 125/132 (94.70%), Query Frame = 0

Query: 1   MPQVDRRTGLSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFS 60
           MPQVD RTG SPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFS
Sbjct: 1   MPQVDWRTGSSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFS 60

Query: 61  LGQNLPPDWGCIPKQPDSLTAPRGATGSKRNGALTLSGAPFQGTCARSAAEEGSPHYNSN 120
           LGQNLPPDWGCIPKQPDSLTAPRGATGS+RNGALTLSGAPFQGTCARSAAE+ SP YNS+
Sbjct: 61  LGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAPFQGTCARSAAEDASPDYNSD 120

Query: 121 IEDARFSTGLFP 133
           +EDARFS+   P
Sbjct: 121 VEDARFSSWALP 132

BLAST of Bhi08G000007 vs. ExPASy TrEMBL
Match: A0A6J1EZI8 (uncharacterized protein LOC111440692 OS=Cucurbita moschata OX=3662 GN=LOC111440692 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 2.3e-62
Identity = 119/132 (90.15%), Postives = 122/132 (92.42%), Query Frame = 0

Query: 1   MPQVDRRTGLSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFS 60
           MPQVD RTGL PFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFS
Sbjct: 63  MPQVDWRTGLPPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFS 122

Query: 61  LGQNLPPDWGCIPKQPDSLTAPRGATGSKRNGALTLSGAPFQGTCARSAAEEGSPHYNSN 120
           LGQNLPPDWGCIPKQPDSLTAPRGATGS+RNGALTLSGAPFQGTCARS AE+ SP YNSN
Sbjct: 123 LGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAPFQGTCARSVAEDASPDYNSN 182

Query: 121 IEDARFSTGLFP 133
            E ARFS+   P
Sbjct: 183 AEGARFSSWALP 194

BLAST of Bhi08G000007 vs. ExPASy TrEMBL
Match: A0A6J1IK28 (uncharacterized protein LOC111475769 OS=Cucurbita maxima OX=3661 GN=LOC111475769 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 1.2e-60
Identity = 117/132 (88.64%), Postives = 120/132 (90.91%), Query Frame = 0

Query: 1   MPQVDRRTGLSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFS 60
           MPQVD RTGL PFHIRLGHI GPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFS
Sbjct: 63  MPQVDWRTGLPPFHIRLGHIVGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFS 122

Query: 61  LGQNLPPDWGCIPKQPDSLTAPRGATGSKRNGALTLSGAPFQGTCARSAAEEGSPHYNSN 120
           LGQNLPPDWG IPKQPDSLTAPRGATGS+RNGALTLSGAPFQGTCARS AE+ SP YNSN
Sbjct: 123 LGQNLPPDWGYIPKQPDSLTAPRGATGSERNGALTLSGAPFQGTCARSVAEDASPDYNSN 182

Query: 121 IEDARFSTGLFP 133
            E ARFS+   P
Sbjct: 183 AEGARFSSWALP 194

BLAST of Bhi08G000007 vs. ExPASy TrEMBL
Match: A0A6N2N409 (Reverse transcriptase domain-containing protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS461341 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 1.9e-56
Identity = 112/132 (84.85%), Postives = 117/132 (88.64%), Query Frame = 0

Query: 10   LSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDW 69
            LSPFHIR G IAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLG+NLPPDW
Sbjct: 927  LSPFHIRPGRIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGRNLPPDW 986

Query: 70   GCIPKQPDSLTAPRGATGSKRNGALTLSGAPFQGTCARSAAEEGSPHYNSNIEDARFSTG 129
            GCIPKQPDS TAPRGA GS  +GALTLSGAPFQGT A SAAE+ SP YNSN   ARFS+ 
Sbjct: 987  GCIPKQPDSQTAPRGAAGSSHDGALTLSGAPFQGTWAWSAAEDASPDYNSNAAGARFSSW 1046

Query: 130  LFPIRSPLLGES 142
             FP+RSPLLGES
Sbjct: 1047 HFPVRSPLLGES 1058

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KEK91.2e-6390.91Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G239680 PE=4 SV=1[more]
A0A5A7VB872.1e-6390.91Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... [more]
A0A6J1EZI82.3e-6290.15uncharacterized protein LOC111440692 OS=Cucurbita moschata OX=3662 GN=LOC1114406... [more]
A0A6J1IK281.2e-6088.64uncharacterized protein LOC111475769 OS=Cucurbita maxima OX=3661 GN=LOC111475769... [more]
A0A6N2N4091.9e-5684.85Reverse transcriptase domain-containing protein OS=Salix viminalis OX=40686 GN=S... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33047PROTEIN TAR1coord: 3..141
NoneNo IPR availablePANTHERPTHR33047:SF22SENESCENCE-ASSOCIATED PROTEINcoord: 3..141

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi08M000007Bhi08M000007mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane