Bhi08G000003 (gene) Wax gourd (B227) v1

Overview
NameBhi08G000003
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionUnknown protein
Locationchr8: 244044 .. 244790 (+)
RNA-Seq ExpressionBhi08G000003
SyntenyBhi08G000003
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTTACTCACCCGTTAACTTGTACACATGTCAGACTCCTTGGTCCATGTTTCAAGACGGGTCGAATGGGGAGCCCACAGGCCGATGCCAGGAGCGCGCAGATGCCGAAGCCCGCCCGAAGGCGCGCGCTGCCAGCCACGATCGGGACGACGACGTCTCCACAGGCGTAACAAAGGCCTGGGCGTAGGCCGCCGTCTCAATCCGCATCGGTCCATGCCCGAAGTCGATCAGCGGACCGACTTTTCACCATTCCACATCCGACTGGGGCACATCGCCGGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTATTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGATACTTGTTTGCTATCGGTCTCTTGCCCATATTTAACCTTGGATAGAATTTAGCGCCCGATTGGGGCTGCATTCCCAAACAACTCGACTCGTTGACAGTGCCTCGTGGTGCGACAGGGTTCGAGCGCAACGGGGCTCTCACCCTCTCTGGTGCCCCTTTCCAGGGGACTTGTGCCCGGTCCGCCGCTGAGGACGCTTCTCCAGACTACAATTCGGACGTCGAGGACGCCCGATTCTCAAGCTGGGCTCTTCCCGGTTCGCTCGCCGTTACTAGGGGAATCCTTGTAAGTTTCTTTTCCTCCGCTTATTGATATTCTTAAACTCAGTGGGTAGTCCCGTCTGACCTAGAGTCGCGTCGAAATTGCCATCCTTTCGAGTACAACGCTTAG

mRNA sequence

ATGGACTCCTTGGTCCATGTTTCAAGACGGGTCGAATGGGGAGCCCACAGGCCGATGCCAGGAGCGCGCAGATGCCGAAGCCCGCCCGAAGGCGCGCGCTGCCAGCCACGATCGGGACGACGACGTCTCCACAGGCGTAACAAAGGCCTGGGCGTAGGCCGCCGTCTCAATCCGCATCGGTCCATGCCCGAAGTCGATCAGCGGACCGACTTTTCACCATTCCACATCCGACTGGGGCACATCGCCGGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTATTTGACTCTCTTTTCAAAAATTTAGCGCCCGATTGGGGCTGCATTCCCAAACAACTCGACTCGTTGACAGTGCCTCGTGGTGCGACAGGGTTCGAGCGCAACGGGGCTCTCACCCTCTCTGGTGCCCCTTTCCAGGGGACTTGTGCCCGGTCCGCCGCTGAGGACGCTTCTCCAGACTACAATTCGGACGTCGAGGACGCCCGATTCTCAAGCTGGGCTCTTCCCGGTTCGCTCGCCGTTACTAGGGGAATCCTTTGGGTAGTCCCGTCTGACCTAGAGTCGCGTCGAAATTGCCATCCTTTCGAGTACAACGCTTAG

Coding sequence (CDS)

ATGGACTCCTTGGTCCATGTTTCAAGACGGGTCGAATGGGGAGCCCACAGGCCGATGCCAGGAGCGCGCAGATGCCGAAGCCCGCCCGAAGGCGCGCGCTGCCAGCCACGATCGGGACGACGACGTCTCCACAGGCGTAACAAAGGCCTGGGCGTAGGCCGCCGTCTCAATCCGCATCGGTCCATGCCCGAAGTCGATCAGCGGACCGACTTTTCACCATTCCACATCCGACTGGGGCACATCGCCGGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTATTTGACTCTCTTTTCAAAAATTTAGCGCCCGATTGGGGCTGCATTCCCAAACAACTCGACTCGTTGACAGTGCCTCGTGGTGCGACAGGGTTCGAGCGCAACGGGGCTCTCACCCTCTCTGGTGCCCCTTTCCAGGGGACTTGTGCCCGGTCCGCCGCTGAGGACGCTTCTCCAGACTACAATTCGGACGTCGAGGACGCCCGATTCTCAAGCTGGGCTCTTCCCGGTTCGCTCGCCGTTACTAGGGGAATCCTTTGGGTAGTCCCGTCTGACCTAGAGTCGCGTCGAAATTGCCATCCTTTCGAGTACAACGCTTAG

Protein sequence

MDSLVHVSRRVEWGAHRPMPGARRCRSPPEGARCQPRSGRRRLHRRNKGLGVGRRLNPHRSMPEVDQRTDFSPFHIRLGHIAGPHPLPSRQFQALFDSLFKNLAPDWGCIPKQLDSLTVPRGATGFERNGALTLSGAPFQGTCARSAAEDASPDYNSDVEDARFSSWALPGSLAVTRGILWVVPSDLESRRNCHPFEYNA
Homology
BLAST of Bhi08G000003 vs. ExPASy TrEMBL
Match: A0A6J1EZI8 (uncharacterized protein LOC111440692 OS=Cucurbita moschata OX=3662 GN=LOC111440692 PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 3.9e-84
Identity = 160/202 (79.21%), Postives = 164/202 (81.19%), Query Frame = 0

Query: 2   DSLVHVSRRVEWGAHRPMPGARRCRSPPEGARCQPRSGRRRLHRRNKGLGVGRRLNPHRS 61
           DSLV VSRRVEWGAHRPMPGARRCRS PEGA CQPRSGRRRLH+RNKGLG GRRLNPHRS
Sbjct: 3   DSLVRVSRRVEWGAHRPMPGARRCRSTPEGACCQPRSGRRRLHKRNKGLGFGRRLNPHRS 62

Query: 62  MPEVDQRTDFSPFHIRLGHIAGPHPLPSRQFQALFDSLFK-------------------- 121
           MP+VD RT   PFHIRLGHIAGPHPLPSRQFQALFDSLFK                    
Sbjct: 63  MPQVDWRTGLPPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFS 122

Query: 122 ---NLAPDWGCIPKQLDSLTVPRGATGFERNGALTLSGAPFQGTCARSAAEDASPDYNSD 181
              NL PDWGCIPKQ DSLT PRGATG ERNGALTLSGAPFQGTCARS AEDASPDYNS+
Sbjct: 123 LGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAPFQGTCARSVAEDASPDYNSN 182

BLAST of Bhi08G000003 vs. ExPASy TrEMBL
Match: A0A6J1IK28 (uncharacterized protein LOC111475769 OS=Cucurbita maxima OX=3661 GN=LOC111475769 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 2.1e-82
Identity = 158/202 (78.22%), Postives = 162/202 (80.20%), Query Frame = 0

Query: 2   DSLVHVSRRVEWGAHRPMPGARRCRSPPEGARCQPRSGRRRLHRRNKGLGVGRRLNPHRS 61
           DSLV VSRRVEWGAHRPMPGARRCRS PEGA CQPRSGRRRLH+RNKGLG GRRLNPHRS
Sbjct: 3   DSLVRVSRRVEWGAHRPMPGARRCRSTPEGACCQPRSGRRRLHKRNKGLGFGRRLNPHRS 62

Query: 62  MPEVDQRTDFSPFHIRLGHIAGPHPLPSRQFQALFDSLFK-------------------- 121
           MP+VD RT   PFHIRLGHI GPHPLPSRQFQALFDSLFK                    
Sbjct: 63  MPQVDWRTGLPPFHIRLGHIVGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFS 122

Query: 122 ---NLAPDWGCIPKQLDSLTVPRGATGFERNGALTLSGAPFQGTCARSAAEDASPDYNSD 181
              NL PDWG IPKQ DSLT PRGATG ERNGALTLSGAPFQGTCARS AEDASPDYNS+
Sbjct: 123 LGQNLPPDWGYIPKQPDSLTAPRGATGSERNGALTLSGAPFQGTCARSVAEDASPDYNSN 182

BLAST of Bhi08G000003 vs. ExPASy TrEMBL
Match: A0A6N2MN31 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS378848 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 2.1e-61
Identity = 130/194 (67.01%), Postives = 136/194 (70.10%), Query Frame = 0

Query: 10  RVEWGAHRPMPGARRCRSPPEGARCQPRSGRRRLHRRNKGLGVGRRLNPHRSMPEVDQRT 69
           R EWGAHRPMPGAR C +  +GARC PRS RR LHRR KG G+GR  +PHRS P  D R 
Sbjct: 597 RDEWGAHRPMPGARMCGARRDGARCSPRSQRRHLHRRFKGPGLGRHRDPHRSTPRAD-RG 656

Query: 70  DFSPFHIRLGHIAGPHPLPSRQFQALFDSLFK-----------------------NLAPD 129
             SPFHIR G IAGPHPLPSRQFQALFDSLFK                       NL PD
Sbjct: 657 PASPFHIRPGRIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGRNLPPD 716

Query: 130 WGCIPKQLDSLTVPRGATGFERNGALTLSGAPFQGTCARSAAEDASPDYNSDVEDARFSS 181
           WGCIPKQ DS T PRGA G   +GALTLSGAPFQGT A SAAEDASPDYNS+   ARFSS
Sbjct: 717 WGCIPKQPDSQTAPRGAAGSSHDGALTLSGAPFQGTWAWSAAEDASPDYNSNAAGARFSS 776

BLAST of Bhi08G000003 vs. ExPASy TrEMBL
Match: A0A397S2R0 (Uncharacterized protein OS=Glomus cerebriforme OX=658196 GN=C1645_794897 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 1.0e-55
Identity = 122/181 (67.40%), Postives = 131/181 (72.38%), Query Frame = 0

Query: 2   DSLVHVSRRVEWGAHRPMPGARRCRSPPEGARCQPRSGRRRLHRRNKGLGVGRRLNPHRS 61
           DSLV VSRR EWG  RP+PGARRCR  P GA CQP+  RRRLHRR    G GRR NPHRS
Sbjct: 3   DSLVRVSRRAEWGTRRPVPGARRCRGTPRGACCQPQLTRRRLHRRIYNPGFGRRTNPHRS 62

Query: 62  MPEVDQRTDFSPFHIRLGHIAGPHPLPSRQFQALFDSLFKNL--APDWGCIPKQLDSLTV 121
            P VD++T  +PFHIR G IA PHPLPSRQFQALFDSLFK L   P        L S T 
Sbjct: 63  TPRVDRQTGLTPFHIRPGRIADPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGL-SPTA 122

Query: 122 PRGATGFERNGALTLSGAPFQGTCARSAAEDASPDYNSDVEDARFSSWALPGSLAVTRGI 181
           PRGATG   +GALTLSG PFQGT ARS  E ASPDYN +   A+FSSWA+PGSLAVTRGI
Sbjct: 123 PRGATGSGHDGALTLSGDPFQGTWARSVTEHASPDYNLNSVAAQFSSWAIPGSLAVTRGI 182

BLAST of Bhi08G000003 vs. ExPASy TrEMBL
Match: A0A7I8KMH4 (Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI8410_06009466 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 6.5e-55
Identity = 127/209 (60.77%), Postives = 135/209 (64.59%), Query Frame = 0

Query: 2   DSLVHVSRRVEWGAHRPMPGARRCRSP-PEGARCQ----PRSGRRRLHRRNKGL--GVGR 61
           DS V VSRRV WGA RP PGAR C SP  EG   +       GRRR H R + L  G+ R
Sbjct: 90  DSSVRVSRRVGWGARRPSPGARGCPSPAKEGGHAETARAASPGRRRRHLRGRTLRPGLRR 149

Query: 62  RLNPHRSMPEVDQRTDFSPFHIRLGHIAGPHPLPSRQFQALFDSLFK------------- 121
           R +P RS P  ++RT F PF IR G  AGPHPLPSRQFQALFDSLFK             
Sbjct: 150 RRDPRRSAPRAERRTGFPPFRIRPGRTAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAI 209

Query: 122 ----------NLAPDWGCIPKQLDSLTVPRGATGFERNGALTLSGAPFQGTCARSAAEDA 181
                     NL PDWGCIPKQ DS T PR A G  R+GALTLSGAPFQGTCARS AEDA
Sbjct: 210 GLSPVFSLGRNLPPDWGCIPKQPDSPTAPRAAPGSGRDGALTLSGAPFQGTCARSVAEDA 269

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1EZI83.9e-8479.21uncharacterized protein LOC111440692 OS=Cucurbita moschata OX=3662 GN=LOC1114406... [more]
A0A6J1IK282.1e-8278.22uncharacterized protein LOC111475769 OS=Cucurbita maxima OX=3661 GN=LOC111475769... [more]
A0A6N2MN312.1e-6167.01Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS378848 PE=4 SV=... [more]
A0A397S2R01.0e-5567.40Uncharacterized protein OS=Glomus cerebriforme OX=658196 GN=C1645_794897 PE=4 SV... [more]
A0A7I8KMH46.5e-5560.77Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI8410_06009466 PE=4 SV... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..53
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..66
NoneNo IPR availablePANTHERPTHR33047PROTEIN TAR1coord: 97..181
NoneNo IPR availablePANTHERPTHR33047:SF28PROTEIN, PUTATIVE-RELATEDcoord: 97..181

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi08M000003Bhi08M000003mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane