Bhi07G001335 (gene) Wax gourd (B227) v1

Overview


Name	Bhi07G001335
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	CLAVATA3/ESR (CLE)-related protein 25-like
Location	chr7: 46405919 .. 46408146 (+)
RNA-Seq Expression	Bhi07G001335
Synteny	Bhi07G001335

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGGCAAAGAAAGGTTTGAGAAAAGTGCAACAGAATCCACCAACCCTATAAAGAAAAAAAGAATGCTCCCTAATTAAACATGCAGCCGCTGCCAAAACAAATACCCATCTTCCTTCTTCTCTTCCTTCCTTCTCCTATTGATCTTAAACACTAATCCCATACTTCTTCTCTTCATTGTTTCGATATCAATCGCCGTTATCTTTCTATCTTCAGGTCGTAAAAGTACGACGCATCGCTCTCGACATAACCTAGAAGAAGACTATATACACTAAATAAAGTTCTCTCTCCCTCTATATATATATGAGAAGTGTAGATAGTTGTAGCTACTTTTCTTACTTGAAGGTCTTGCTTGGAGCTGTGGTTGTGGGGCTGTTTGTATGGCTTTTAATCGTTGGGTCGCTGCCACCAGGGAGAACAACAAGCCGGCGGCCGGCAGCTGAGTCTGAAGTTGAGGGAAGCCATGTCATGAAGCAAGCTGAGGAATTGGCTAACAACAACCATCCAAAGTTGGATCCTAACTTTATGAGCAAAGTTAAAGTTCCTAAAGGACCAGACCCCATTCATAACAGGTATATTTAAATACGCTTTGCATTAAGATTATTAAATTTACTAAAAACCTATACTAAATTTAGCATGAATAATTCATCCTGTTTAAGTTCTTCTAATGTCACACTTAGTATTAATAAAGTTTATTAATAAGGTTAAAACATTATCCTTCTCTATACTTTGAAGTTTGTTCGATTTTATTTTATATACTTTCATTTGTCTAATTCTAGTTCTATTGTTTCAATAAATCTTAAATTTAATCCCCCTAACTAGTTTATTAGTGTTTTTTCTCCAAATTTTTACTGTAAATTTCGAAAACCTATTCACATAGTATTTTCTTATGTGAAAATTATTATTATTATTATTTAACTAATTTCAATAAGAATTAATATGGAAGTATTACATTTAAAATTTATTGAAATAATAAGAACTAAAATTAGAGAATTGAAAGTATATAAACTAAAATTAAACAAACTTCAAAGTACAGAAATTTTAACCTATTAACAATTACGTGTTAGACCTTGTGTTAAATTTTGAAGTTAGGTAAATGTTAGAATTGATTAAATATATACACTTCAATAGTCTTAGTGTGTATGCTTTAGAAGGTATACTTTAAACAAATGAAAAACACTTTTTTCCAAAATTATCTAACAATATATAGCTTATGGGCTTTAATTAAAATCATGTATGCAAGTATGGTTGAAAATTTTGTATTGAAGCTATCAATCTAAGCATAGTTTTTTAGTGGATAAAGGTACTAAATACGATTTCAACAAAAAAAAAAATTATTGAATTAATGTGTTATAATAGTGAGTGTTTGTTGAATATATATATATATTATATATTATATAATATATATTATATATATATATAATATATATATACGTACTTGGATTGGCAGGAGAATTGGGGTTAAAGGAGGACCTCCCAGAGGAGCTTAGACTTTGTACACAGAAAGGCATAGATTCCTTCCTCAGCTTTATATAGCAGTTTAAATATTTAAAGATCATTATTATGAAGATTTCTTTTTTCTTTTCTTTTTTTGGGTAATTTCAATAAGGGGAAATGTATAAAATCTCTGAATAAATCTGGATTGTATAGAATTGACGCACACTCAACTTTGTACCTTTTGTAGAACACTAACTCTTCATAATATCCCTCAAATTTTTCTAAAAATACTAGCTTAGATGAGAAAATGGGCTTGGGCTTTTTTGGTTCGATTTCGAATTGGCCCAAAATCCGGAGCTCGGCCCAAATACAAATCTTATTGGGCTTATCAACCAACCAATTCGGGTGTAGGAAGGAACCAAAAGTCCAGTTCATTCTATTCTTCTGCAGAAACATTCAGTCGTCCACTTTATTTCAACTTTTCTTCGAAAATGGACACAAGTTTGAACTTTGAAGAATCTTTTTAAAGAATATACATATACTTCTTTTTATTTCAAAAAAAATATTTACATTCCTGGGTCAAAATATATTACTTCTAATTGTTTACTGGTCTAAACGAATAAGCTTTTGTAAAAATATATTGGATTCCATTTTCTTAATTTATCCTTCTTGTAAAAAGTTGTTTTTGTACCTTATAAATAATAAAGTCATTTAAGAAACATCATGATATTAAATTTTCATTAACATATAGATATTTTTATTATACCCTAAAAAAATTATGAAATAGAAAACAA

mRNA sequence

AGGGCAAAGAAAGGTTTGAGAAAAGTGCAACAGAATCCACCAACCCTATAAAGAAAAAAAGAATGCTCCCTAATTAAACATGCAGCCGCTGCCAAAACAAATACCCATCTTCCTTCTTCTCTTCCTTCCTTCTCCTATTGATCTTAAACACTAATCCCATACTTCTTCTCTTCATTGTTTCGATATCAATCGCCGTTATCTTTCTATCTTCAGGTCGTAAAAGTACGACGCATCGCTCTCGACATAACCTAGAAGAAGACTATATACACTAAATAAAGTTCTCTCTCCCTCTATATATATATGAGAAGTGTAGATAGTTGTAGCTACTTTTCTTACTTGAAGGTCTTGCTTGGAGCTGTGGTTGTGGGGCTGTTTGTATGGCTTTTAATCGTTGGGTCGCTGCCACCAGGGAGAACAACAAGCCGGCGGCCGGCAGCTGAGTCTGAAGTTGAGGGAAGCCATGTCATGAAGCAAGCTGAGGAATTGGCTAACAACAACCATCCAAAGTTGGATCCTAACTTTATGAGCAAAGTTAAAGTTCCTAAAGGACCAGACCCCATTCATAACAGGAGAATTGGGGTTAAAGGAGGACCTCCCAGAGGAGCTTAGACTTTGTACACAGAAAGGCATAGATTCCTTCCTCAGCTTTATATAGCAGTTTAAATATTTAAAGATCATTATTATGAAGATTTCTTTTTTCTTTTCTTTTTTTGGGTAATTTCAATAAGGGGAAATGTATAAAATCTCTGAATAAATCTGGATTGTATAGAATTGACGCACACTCAACTTTGTACCTTTTGTAGAACACTAACTCTTCATAATATCCCTCAAATTTTTCTAAAAATACTAGCTTAGATGAGAAAATGGGCTTGGGCTTTTTTGGTTCGATTTCGAATTGGCCCAAAATCCGGAGCTCGGCCCAAATACAAATCTTATTGGGCTTATCAACCAACCAATTCGGGTGTAGGAAGGAACCAAAAGTCCAGTTCATTCTATTCTTCTGCAGAAACATTCAGTCGTCCACTTTATTTCAACTTTTCTTCGAAAATGGACACAAGTTTGAACTTTGAAGAATCTTTTTAAAGAATATACATATACTTCTTTTTATTTCAAAAAAAATATTTACATTCCTGGGTCAAAATATATTACTTCTAATTGTTTACTGGTCTAAACGAATAAGCTTTTGTAAAAATATATTGGATTCCATTTTCTTAATTTATCCTTCTTGTAAAAAGTTGTTTTTGTACCTTATAAATAATAAAGTCATTTAAGAAACATCATGATATTAAATTTTCATTAACATATAGATATTTTTATTATACCCTAAAAAAATTATGAAATAGAAAACAA

Coding sequence (CDS)

ATGAGAAGTGTAGATAGTTGTAGCTACTTTTCTTACTTGAAGGTCTTGCTTGGAGCTGTGGTTGTGGGGCTGTTTGTATGGCTTTTAATCGTTGGGTCGCTGCCACCAGGGAGAACAACAAGCCGGCGGCCGGCAGCTGAGTCTGAAGTTGAGGGAAGCCATGTCATGAAGCAAGCTGAGGAATTGGCTAACAACAACCATCCAAAGTTGGATCCTAACTTTATGAGCAAAGTTAAAGTTCCTAAAGGACCAGACCCCATTCATAACAGGAGAATTGGGGTTAAAGGAGGACCTCCCAGAGGAGCTTAG

Protein sequence

MRSVDSCSYFSYLKVLLGAVVVGLFVWLLIVGSLPPGRTTSRRPAAESEVEGSHVMKQAEELANNNHPKLDPNFMSKVKVPKGPDPIHNRRIGVKGGPPRGA

Homology

[Close]

BLAST of Bhi07G001335 vs. ExPASy TrEMBL
Match: A0A0A0KQF7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G604030 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.3e-35
Identity = 87/108 (80.56%), Postives = 94/108 (87.04%), Query Frame = 0


Query: 1   MRSVDSCSYFSYLKVLLGAVVVGLFVWLLIVGSL--PPGRTTSRRPAAES--EVEGSHVM 60
           M+SVDSC YFSYLKVLLGAVVVGLFVWLL+VGS   PPGRT S + AAES  +VEG H M
Sbjct: 1   MKSVDSCCYFSYLKVLLGAVVVGLFVWLLVVGSSPPPPGRTKSWQAAAESVHQVEGRHAM 60

Query: 61  KQAE-ELANNNHPK-LDPNFMSKVKVPKGPDPIHNRRIGVKGGPPRGA 103
           K+AE +LA NNHPK LDPNFMSKV+VPKGPDPIHNRRIGVKGGPPRGA
Sbjct: 61  KEAEDQLAINNHPKLLDPNFMSKVRVPKGPDPIHNRRIGVKGGPPRGA 108

[Close]

BLAST of Bhi07G001335 vs. ExPASy TrEMBL
Match: A0A6J1DAM7 (uncharacterized protein LOC111019209 OS=Momordica charantia OX=3673 GN=LOC111019209 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 2.0e-20
Identity = 64/107 (59.81%), Postives = 74/107 (69.16%), Query Frame = 0


Query: 1   MRSVDSCSYFSYLKVLLGAVVVGLFVWLLIVGSLPPGRTTSRRPAAES-----EVEGSHV 60
           MRS  +   FSYLK LL A+VVGLF+W+L+VG LP  R    RPA E+        GSHV
Sbjct: 1   MRSEGNLCLFSYLKFLLQALVVGLFLWILMVG-LPESR---ERPAVETTNGLLATVGSHV 60

Query: 61  MKQAEELANNNHPKLDPNFMSKVKVPKGPDPIHNRRIGVKGGPPRGA 103
            KQ + L NNNH  LD NFMSKV+VPKGPDPIHNRR+G+ GGPP  A
Sbjct: 61  -KQVKVLPNNNHQDLDLNFMSKVRVPKGPDPIHNRRVGINGGPPSRA 102

[Close]

BLAST of Bhi07G001335 vs. ExPASy TrEMBL
Match: A0A067H4U1 (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g034371mg PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.3e-08
Identity = 41/90 (45.56%), Postives = 54/90 (60.00%), Query Frame = 0


Query: 14  KVLLGAVVVGLFVWLLIVGSLPP-GRTTSRRPAAESEVEGSHVMKQAEELANN---NHPK 73
           K L GA+ VG  + LL++G+L   G +TS     +S       +K+AE L      +HP+
Sbjct: 8   KALFGALAVGWLICLLLIGNLESGGNSTSTLTTTQSTAN----LKRAEALGREKFIDHPE 67

Query: 74  LDPNFMSKVKVPKGPDPIHNRRIGVKGGPP 100
           LD N+MSK +VP GPDPIHNRR G  G PP
Sbjct: 68  LDLNYMSKRRVPNGPDPIHNRRAGNSGRPP 93

[Close]

BLAST of Bhi07G001335 vs. ExPASy TrEMBL
Match: V4VGV5 (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10033175mg PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.3e-08
Identity = 41/90 (45.56%), Postives = 54/90 (60.00%), Query Frame = 0


Query: 14  KVLLGAVVVGLFVWLLIVGSLPP-GRTTSRRPAAESEVEGSHVMKQAEELANN---NHPK 73
           K L GA+ VG  + LL++G+L   G +TS     +S       +K+AE L      +HP+
Sbjct: 8   KALFGALAVGWLICLLLIGNLESGGNSTSTLTTTQSTAN----LKRAEALGREKFIDHPE 67

Query: 74  LDPNFMSKVKVPKGPDPIHNRRIGVKGGPP 100
           LD N+MSK +VP GPDPIHNRR G  G PP
Sbjct: 68  LDLNYMSKRRVPNGPDPIHNRRAGNSGRPP 93

[Close]

BLAST of Bhi07G001335 vs. ExPASy TrEMBL
Match: A0A2H5N8H6 (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_022560 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 6.7e-08
Identity = 40/90 (44.44%), Postives = 53/90 (58.89%), Query Frame = 0


Query: 14  KVLLGAVVVGLFVWLLIVGSLPP-GRTTSRRPAAESEVEGSHVMKQAEELANN---NHPK 73
           K L G + VG  + LL++G+L   G +TS     +S       +K+AE L      +HP+
Sbjct: 8   KALFGVLAVGWLICLLLIGNLESGGNSTSTLTTTQSTAN----LKRAEALGREKFIDHPE 67

Query: 74  LDPNFMSKVKVPKGPDPIHNRRIGVKGGPP 100
           LD N+MSK +VP GPDPIHNRR G  G PP
Sbjct: 68  LDLNYMSKRRVPNGPDPIHNRRAGNSGRPP 93

The following BLAST results are available for this feature:

BLAST of Bhi07G001335 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi07G001335 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi07G001335 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQF7	1.3e-35	80.56	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G604030 PE=4 SV=1	[more]
A0A6J1DAM7	2.0e-20	59.81	uncharacterized protein LOC111019209 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A067H4U1	2.3e-08	45.56	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g034371mg PE=4 SV=1	[more]
V4VGV5	2.3e-08	45.56	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10033175mg PE=4 ...	[more]
A0A2H5N8H6	6.7e-08	44.44	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_022560 PE=4 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..102
None	No IPR available	PANTHER	PTHR34277:SF2	CLAVATA3/ESR (CLE)-RELATED PROTEIN 26	coord: 7..100
IPR039316	CLAVATA3/ESR (CLE)-related protein 25/26	PANTHER	PTHR34277	CLAVATA3/ESR (CLE)-RELATED PROTEIN 26	coord: 7..100

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi07M001335	Bhi07M001335	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045168	cell-cell signaling involved in cell fate commitment
cellular_component	GO:0016021	integral component of membrane