Bhi07G001272 (gene) Wax gourd (B227) v1

Overview


Name	Bhi07G001272
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	50S ribosomal protein L18
Location	chr7: 44667525 .. 44672321 (+)
RNA-Seq Expression	Bhi07G001272
Synteny	Bhi07G001272

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAGAAGGGATCAAAATTGATCAGCAATTGGATTTCTCGCCTTTTTGGGTAAGACATCACAAATAAGATATTTACGTATAAAACTGAATAAAATAAATAATAAATAAATAAATAAGGAGACAATTTGGGTTTGTATAAACACCCAATGAAAAATTGACACGTCGTCATTTTGTTTTTTAAAAAAATCTTTTTCATTTCATATAGAAAAATGAAACAGACTACACCTAATCATTGTCCAATAAATAAAGTCTATTTTCTATTTTCATACTCTTTTTTTTTAGATTCTAACACTGTAGTAGAGATTATGATGCTTAATTAAGGTATGCCAAATTGGTAAGCAACTCTATTGAGCATGTGTTGAGAAAAAGGTTAAAAAATATTAATAGTTTCTCAAATTTGGTTAAAAAAATACTTGTGATCCCTAAATTTTAAGAAAGGTAAAAATTTAGTTGAGTTCCTAAATTTAGTTGATAACTATTTAGTCTATATACTTTTAAAATTTATAATGTTTTTTGTCTCACTAGTTTACAATTTGTTACATTTTAGTCTTTATTGTGAAAAATATTATTATGATTTAGTAAAATTTCTTAAAGGATAAGTTCTTGGGAATCAAATTTATATATGAATGATAAAGTCGGGGTTGTTATGCAATAAAAAGTGACACTTAATTTTTATGAGAAATTTCACTATAGAAATTAAATCGTTATAAATTGTAAGATACAGGACTAAATCATTATTTATTAAGATTTAGAGACTGAATTATTACAAATTTGAAAGTTCAAAACCTAAATTGTTACCAAGTCTATGAAATAAATTGTTGTTTTCATGAAATTCAAGGATCATAAGTGTTTTTTTAACCTTTAAATTTCGACCCTACAAGAATTTAGTTCAACTTTAATTTATGAAAATTCAGTCCTTGTACTTTTACATTTATAATAATTTAGTATTTAAACTTTTAAAATTGTAACAATTTTGATAGATATTAATTAAATTTATATCGAAGTCCTATCACAAAAAATAGTATTAAGATTTTTTTTTTTTTTTTTTTTTTTGTAAACTGATTAATAATCAAATTTGTTTATATATTTTAAGAACAAAGTACAACTGAATTATTACAAATTTAAAACTATATTGTACTAAAATATAAGTATTAAATTATTTCAAATTTTAAATTCATATATTACCAACCAAATTTAAGAATAAGCAGCGAACATAGTTCAATTGTATACGAAACCTTGCCACTAAGATCAATAACTTGTATTCTGAAGACAAGTGGCTGGAACAAAATCGCAATCCCATCCACATCCACGTGGAGGAAACGTATTTTCTCCTGCCATCACAAGGAAGCCAAGTCGCCGGCCGGAAAATTTTCAACGGCACCGCCTGATCGGGCTCTTATAGTACAGAATCAATTGGACCTCACACAACCAAAACCACATTCATTCCGGCGGAAAAAAAAGTTTTTTTTGGTTTTTTTTATAATTTCTTTTAGCTAAAATCCTCTGTCCCATGTAATTAAAACTTCTGTGTTCAACTCTTGTGGGGCTTTTTCTTCCTCATTTCCATTGTGTTTCGCTATTTATGAGTCTCGTTTTCAATATGGTGATTGGGTTTTGCTTGACTTTGTTTGCTGGATTGTCAATCACTTTTTCAGGGATCGCGTGCAAGGTGCTCGACGAAATTCCTGAATGACGAAGTCCCCGTCGTACAGCGTATATTACGCATAGAAATCATTTCAAGAATGCCTTCTTTACTTCTAAATACTTTAAATTTAAAAAAAGTATATGGTGGCATGGCTTTTCTAAATGGTCCTGGTCTGCTATCGAAGACTTCTACGCCCTTTGGGTTGCAGTCAAAGCCATTTAACTTTCCCAGCTTGAAAACTAGAAGTAAGTGAAGCAGTACGTTAGACACATACTAGCATATGTTTAACGTACCAAATACTGCAAGCAGTTGATTTTGTTTTATAATGAGTTCCTACATTCCGTGTAGATTGTGATGTGAAGCCGTTGACGATCCAAGCAAGAGGAAACTCTAAAACAGAAAGTGCAAAAATTACAAATAGGAGGTTGCAGAAAAAGGTGCGTTATCATTCGCTTTACTTCTCCCAAGTTTGTCTTGAAGGGACTGGTTTTTTCGTAGGAGGAGAGTGAGCAAGGTTAGAAATTTAGTAACACAGCAGCTTGAAGTCAGTGTTAAAAGAATTGACAAGATAAGGAGGATGTAGAGACCAAGAACCAAAGTCGTATTGCTTCAACTGCAATGCACAATATAACAGTCTTAAACTTAAAACCCAATATAAAATGGCAACCAATCTTAAACAGGTTGAACTTGCCTAGAAAAAATTTACACTCACTCTCAAATAGATTATTGAAATTTTTTTTTTTTCAAAAAAGTGAAATACATTTCTAAATTTCGATGTTGAGTGTAATAACTCGTTGAACATTCAATTTTGTATCTAAATAGATCTGTAACATATTCGATAGTTTTAAAAATCACGAACTTATTAGAGAAAAAATTAGAAGTTTAATATTCTATTAGACAAATATCCAATTATCCCCACGGTGACAAATATATATATATATTCTATTAGAAACACAAATCAATTTTATGCCTAATAGATTTGTTAATTTTTTTTAAAATGTTAAGTATGCCGAGGATCATTTAAGATATGAATTTGAAATTTTAGATACCTACTTGTTACAAGTATATAGACCTATTAACTTAAAAATTAAAAGTTTGAGGACATATTAAAGTGAAAACTAAAGTAATTTATATAAGTTAACACATGGAAGCTTAGAGCAACTTTTGCAACAAACGGAAAGTAGTGCCCTGAACATTTAAAAGTTAGGTGATCTTAAATCTGTTCTTAGTACACAATTTGAGTTGCGAATTTATGAACATTATAAAAAAAACTTTAACAAGTGTAAGATGTTGATACATGGAACCATGCTAATGGATTTTATGCACAATTTACATCTGTAATACTAACATTGGAGCACTTTTTATTTTTAAATTTCGTTCATTGATAATCATCATAGTAATAACAAAATTCTCATTACATTTGATGGTTTTCAACGCCAAGCAGTATAATGGCACTCCTACAAGACCAAGGCTTTCAGTATTCTGTTCTGATAAGCAGTTGTATGCAATGTTGGTTGACGACCAGAACAAGAAGTGCCTGTTTTATGGAAGCACCTTACAAAAATCTATGCGTCCAAGTCCCTCATGCACTACCATCGTAAGTTTTCATTCTTAAGGTCTGACTTGGAATTAAGAGCACGAAAGTCCTAAGAAACTATTATTAAATAGGGACAATTACAGATATAACAATTATGTATAAAGTATTAGTAGATATAACACAATGTAAAAGAATTTGTAGATATAGAAAAATTTAGATCTAGTTCTCGAAATCTATGTGATAAAAGACATAGATTTTGCTATGGATAGTAATAGACTTTTATCATTGATAAATCCATATAAATGATAGACTTCTATCACATATAGCAAAATCTATAAGTGATAGACTTTTATCACTGGTAGAAGTGTATCATTTATAAACTAATATAAAAAATTTGACACGGATACTCTATTAGTAATATGAGGTATCACTGATAGACTCTATCAGCGATTAGAGTCTATGACTTATTGGCTTTATATTATTTAAAATCTATCAACAACACCCAACGATAGATTTCACATAACATGTACAAATCTATCACTTATATAGAAGGCTACTTATAGATTTTTATTACGTACTCTTAAGCTTCAATAATAGATAGTTTAGTTGCAGTTTAATTATTTCTAGTTCTTATGGCTACTTTGAAAAGTGAGTGCATCAAATTACTTTGAATATTTTGTTAGTTATCAATGAAAGAGATGGAGCAAACAAAACTGGAGGAAGAAAATAAGAGAAAGAAAAAGAAAAAGAATTGTTTGAAATTTATCGATGATAGAAGAGAGAGAATATATATTAGTTGTACATTTTGATTGAAATCTATCTATCGTAATAGTTTATCATTGATAGATTTAGGTCGTGAATTAAAAACATACTAGTGAAAGACTTCTATTAATGACAGACTTCTCACTATAAACAAATATAGAAATCAACATGAGCATAGTTCAACTAGCATAAGACATAAACTTATAATAAAAAAATGTCCAAAGTTCAAATTCCATCGTTATTGTGTCAAAGAAGCATAATGATAAACACTAATAAAATAACAAGAGAAGGGAAATGAACTTGTAAAGAATTGTAAAGAAGAGAAAAGTCAATGAAAATCAAATACAACTAAAGAAATTGAATAAAATGTAAGGAAAAAAATGACAAAATTGAGAAGGTAAATGCTAATGTTAATCAAGAATAAGAAACAATGTGAACAACAATATAAGAAATCATTTGAAAAAAATAATCTAAACTAAGTTGTCAGTTGAAGAATCTCCCAATAACACATGTTTTGGAACTCAGAAAGAAAAAAAAAAAATGTATAGTAAACATAAAATTGGTTATATTTACAATTTTAAAAAAATGTGACTATACACTTAATTATTAGTACTACAAGCGCTACTTGTTGCAATTACCCTAATAAAATATAAAAGGTCTAAATTTTTTTTTTTTTTTTTTTTTGGTGATTACAGGAAGCTGCTCAACATGTTGGTGAAGAACTTGTGAAGGCATGCGAGGACTTGAACATACACGAAATATCATCTTATGATCGAAATGGGTTTGCTCGCGGAGAGAAAATGCAAGCCTTCGAAATTGCAATTTCCCGCTATGGGCTCTTACAACGATAG

mRNA sequence

ATGGTAGAAGGGATCAAAATTGATCAGCAATTGGATTTCTCGCCTTTTTGGGGATCGCGTGCAAGGTGCTCGACGAAATTCCTGAATGACGAAGTCCCCGTCGTACAGCGTATATTACGCATAGAAATCATTTCAAGAATGCCTTCTTTACTTCTAAATACTTTAAATTTAAAAAAAGTATATGGTGGCATGGCTTTTCTAAATGGTCCTGGTCTGCTATCGAAGACTTCTACGCCCTTTGGGTTGCAGTCAAAGCCATTTAACTTTCCCAGCTTGAAAACTAGAAATTGTGATGTGAAGCCGTTGACGATCCAAGCAAGAGGAAACTCTAAAACAGAAAGTGCAAAAATTACAAATAGGAGGTTGCAGAAAAAGTATAATGGCACTCCTACAAGACCAAGGCTTTCAGTATTCTGTTCTGATAAGCAGTTGTATGCAATGTTGGTTGACGACCAGAACAAGAAGTGCCTGTTTTATGGAAGCACCTTACAAAAATCTATGCGTCCAAGTCCCTCATGCACTACCATCGAAGCTGCTCAACATGTTGGTGAAGAACTTGTGAAGGCATGCGAGGACTTGAACATACACGAAATATCATCTTATGATCGAAATGGGTTTGCTCGCGGAGAGAAAATGCAAGCCTTCGAAATTGCAATTTCCCGCTATGGGCTCTTACAACGATAG

Coding sequence (CDS)

ATGGTAGAAGGGATCAAAATTGATCAGCAATTGGATTTCTCGCCTTTTTGGGGATCGCGTGCAAGGTGCTCGACGAAATTCCTGAATGACGAAGTCCCCGTCGTACAGCGTATATTACGCATAGAAATCATTTCAAGAATGCCTTCTTTACTTCTAAATACTTTAAATTTAAAAAAAGTATATGGTGGCATGGCTTTTCTAAATGGTCCTGGTCTGCTATCGAAGACTTCTACGCCCTTTGGGTTGCAGTCAAAGCCATTTAACTTTCCCAGCTTGAAAACTAGAAATTGTGATGTGAAGCCGTTGACGATCCAAGCAAGAGGAAACTCTAAAACAGAAAGTGCAAAAATTACAAATAGGAGGTTGCAGAAAAAGTATAATGGCACTCCTACAAGACCAAGGCTTTCAGTATTCTGTTCTGATAAGCAGTTGTATGCAATGTTGGTTGACGACCAGAACAAGAAGTGCCTGTTTTATGGAAGCACCTTACAAAAATCTATGCGTCCAAGTCCCTCATGCACTACCATCGAAGCTGCTCAACATGTTGGTGAAGAACTTGTGAAGGCATGCGAGGACTTGAACATACACGAAATATCATCTTATGATCGAAATGGGTTTGCTCGCGGAGAGAAAATGCAAGCCTTCGAAATTGCAATTTCCCGCTATGGGCTCTTACAACGATAG

Protein sequence

MVEGIKIDQQLDFSPFWGSRARCSTKFLNDEVPVVQRILRIEIISRMPSLLLNTLNLKKVYGGMAFLNGPGLLSKTSTPFGLQSKPFNFPSLKTRNCDVKPLTIQARGNSKTESAKITNRRLQKKYNGTPTRPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKSMRPSPSCTTIEAAQHVGEELVKACEDLNIHEISSYDRNGFARGEKMQAFEIAISRYGLLQR

Homology

[Close]

BLAST of Bhi07G001272 vs. TAIR 10
Match: AT1G14205.1 (Ribosomal L18p/L5e family protein )

HSP 1 Score: 189.1 bits (479), Expect = 3.9e-48
Identity = 98/152 (64.47%), Postives = 115/152 (75.66%), Query Frame = 0


Query: 75  KTSTPFGLQSKPF-NFPSLKTRNCDVKPLTIQARGNSKTESAKITNRRLQKKYNGTPTRP 134
           + S   G + KP+  FP   T    VKP  I+ARGN++ ES K  NRR +KK+ GT T+P
Sbjct: 13  RVSDILGTRLKPYPQFPIRITTMSVVKPFVIEARGNTRVESPKTRNRRSRKKFTGTQTKP 72

Query: 135 RLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKSMRPSPSCTTIEAAQHVGEELVKACEDL 194
           RLSVFCSDKQLYAMLVDD NKKCLFY STLQKS+R  P CT IEAA+ VGEEL+KA  DL
Sbjct: 73  RLSVFCSDKQLYAMLVDDFNKKCLFYASTLQKSIRGDPPCTVIEAAKRVGEELIKASIDL 132

Query: 195 NIHEISSYDRNGFARGEKMQAFEIAISRYGLL 226
            I+EISSYDRNG  RGE+MQAFEIAI+++G L
Sbjct: 133 KINEISSYDRNGNKRGERMQAFEIAIAQHGFL 164

[Close]

BLAST of Bhi07G001272 vs. TAIR 10
Match: AT1G48350.1 (Ribosomal L18p/L5e family protein )

HSP 1 Score: 77.4 bits (189), Expect = 1.6e-14
Identity = 48/143 (33.57%), Postives = 79/143 (55.24%), Query Frame = 0


Query: 85  KPFNFPSLKTRNCDVKPLTIQARGNSKTESAKITNRRLQKKYNGTPTRPRLSVFCSDKQL 144
           KP++  SL++R+     + ++A+  + +E     + R++KK NGT  RPRL VF S+K L
Sbjct: 32  KPWSSSSLQSRS-----MVVEAKTKTSSEDRIARHSRIRKKVNGTTERPRLCVFRSNKHL 91

Query: 145 YAMLVDDQNKKCLFYGSTLQKSMRPS---PSCTTIEAAQHVGEELVKACEDLNIHEISSY 204
           Y  ++DD     L   ST QK +       S  TIE A+ VGE + K+C +  I ++ ++
Sbjct: 92  YVQVIDDTKMHTLASASTKQKPISEEFDYTSGPTIEVAKKVGEVIAKSCLEKGITKV-AF 151

Query: 205 DRNGFARGEKMQAFEIAISRYGL 225
           DR G+    +++A   A   +GL
Sbjct: 152 DRGGYPYHGRIEALAAAAREHGL 168

[Close]

BLAST of Bhi07G001272 vs. ExPASy Swiss-Prot
Match: P82195 (50S ribosomal protein L18, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL18 PE=1 SV=3)

HSP 1 Score: 78.2 bits (191), Expect = 1.4e-13
Identity = 47/141 (33.33%), Postives = 80/141 (56.74%), Query Frame = 0


Query: 91  SLKTRNCDVKPLT---IQARGNSKTESAKITNRRLQKKYNGTPTRPRLSVFCSDKQLYAM 150
           SL  +  + +P T   IQA+ +++ E     + R++KK  GTP RPRL VF S+K LY  
Sbjct: 26  SLPPKFVNFRPQTLPLIQAKAHTRREDRTARHVRIRKKVEGTPERPRLCVFRSNKHLYVQ 85

Query: 151 LVDDQNKKCLFYGSTLQKSMRPS---PSCTTIEAAQHVGEELVKACEDLNIHEISSYDRN 210
           ++DD     L   ST+QK++  +    +  T+E AQ +GE + K+C +  I ++ ++DR 
Sbjct: 86  VIDDTKMHTLAAASTMQKAISENIDYSAGPTVEVAQKIGEMIAKSCLEKGITKV-AFDRG 145

Query: 211 GFARGEKMQAFEIAISRYGLL 226
           G+    +++A   A   +GL+
Sbjct: 146 GYPYHGRVKALADAAREHGLV 165

[Close]

BLAST of Bhi07G001272 vs. ExPASy Swiss-Prot
Match: Q9SX68 (50S ribosomal protein L18, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL18 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.3e-13
Identity = 48/143 (33.57%), Postives = 79/143 (55.24%), Query Frame = 0


Query: 85  KPFNFPSLKTRNCDVKPLTIQARGNSKTESAKITNRRLQKKYNGTPTRPRLSVFCSDKQL 144
           KP++  SL++R+     + ++A+  + +E     + R++KK NGT  RPRL VF S+K L
Sbjct: 32  KPWSSSSLQSRS-----MVVEAKTKTSSEDRIARHSRIRKKVNGTTERPRLCVFRSNKHL 91

Query: 145 YAMLVDDQNKKCLFYGSTLQKSMRPS---PSCTTIEAAQHVGEELVKACEDLNIHEISSY 204
           Y  ++DD     L   ST QK +       S  TIE A+ VGE + K+C +  I ++ ++
Sbjct: 92  YVQVIDDTKMHTLASASTKQKPISEEFDYTSGPTIEVAKKVGEVIAKSCLEKGITKV-AF 151

Query: 205 DRNGFARGEKMQAFEIAISRYGL 225
           DR G+    +++A   A   +GL
Sbjct: 152 DRGGYPYHGRIEALAAAAREHGL 168

[Close]

BLAST of Bhi07G001272 vs. ExPASy Swiss-Prot
Match: A9FGF8 (50S ribosomal protein L18 OS=Sorangium cellulosum (strain So ce56) OX=448385 GN=rplR PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.3e-12
Identity = 41/105 (39.05%), Postives = 62/105 (59.05%), Query Frame = 0


Query: 121 RLQKKYNGTPTRPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKSMRPS-PSCTTIEAA 180
           R++KK  GTP RPRLSVF S K +YA ++DD + K L + STL K ++ S      +EAA
Sbjct: 14  RIRKKVEGTPERPRLSVFRSSKHIYAQVIDDVSGKTLAHASTLSKDLKGSLDEDNKVEAA 73

Query: 181 QHVGEELVKACEDLNIHEISSYDRNGFARGEKMQAFEIAISRYGL 225
           + VG  + + C++  I ++  +DRNG+    ++ A   A    GL
Sbjct: 74  KKVGALIARICKERQIDKV-VFDRNGYLYHGRVSALAQAAREAGL 117

[Close]

BLAST of Bhi07G001272 vs. ExPASy Swiss-Prot
Match: Q8SAY0 (50S ribosomal protein L18, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=RPL18 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.2e-11
Identity = 42/107 (39.25%), Postives = 61/107 (57.01%), Query Frame = 0


Query: 121 RLQKKYNGTPTRPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKSMRPS---PSCTTIE 180
           RL+KK +GT  RPRLSVF S+K LYA ++DD     L   ST+ KS+       +  T+E
Sbjct: 63  RLRKKVSGTTERPRLSVFRSNKHLYAQVIDDTKSCTLVSASTMHKSLSKDLEYSAGPTVE 122

Query: 181 AAQHVGEELVKACEDLNIHEISSYDRNGFARGEKMQAFEIAISRYGL 225
            AQ +GE + K+C +  I ++  +DR GF    +++A   A    GL
Sbjct: 123 VAQKIGEVIAKSCLEKGITKV-VFDRGGFLYHGRIKALADAARENGL 168

[Close]

BLAST of Bhi07G001272 vs. ExPASy Swiss-Prot
Match: P04453 (50S ribosomal protein L18 OS=Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154) OX=340047 GN=rplR PE=3 SV=2)

HSP 1 Score: 67.8 bits (164), Expect = 1.8e-10
Identity = 43/115 (37.39%), Postives = 65/115 (56.52%), Query Frame = 0


Query: 110 SKTESAKITNRRLQKKYNGTPTRPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKSMRP 169
           +KTE+ K  + R++ K  GT  RPRL+VF S+   YA ++DD     L   STL+  ++ 
Sbjct: 4   TKTEARKRRHFRVRHKVVGTAERPRLNVFKSNTNFYAQIIDDTKGVTLVSASTLKMDLK- 63

Query: 170 SPSCTTIEAAQHVGEELVKACEDLNIHEISSYDRNGFARGEKMQAFEIAISRYGL 225
             S + I+AA+ V EEL K     NI+++  +DRNG+    K++AF       GL
Sbjct: 64  --SKSNIQAAEKVAEELTKKALAANINQV-VFDRNGYLYHGKIKAFAQKARENGL 114

[Close]

BLAST of Bhi07G001272 vs. ExPASy TrEMBL
Match: A0A6J1JIY0 (uncharacterized protein LOC111484997 OS=Cucurbita maxima OX=3661 GN=LOC111484997 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 3.6e-86
Identity = 163/181 (90.06%), Postives = 169/181 (93.37%), Query Frame = 0


Query: 47  MPSLLLNTLNLKKVYGGMAFLNGPGLLSKTSTPFGLQSKPFNFPSLKTRNCDVKPLTIQA 106
           MPSL LNT+N +KV GGM FLN PGLLSKTSTPF  QSKPFNFPSLK R+CDVKPL IQA
Sbjct: 1   MPSLPLNTINFEKVNGGMHFLNVPGLLSKTSTPFWFQSKPFNFPSLKRRHCDVKPLMIQA 60

Query: 107 RGNSKTESAKITNRRLQKKYNGTPTRPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKS 166
           RGNSKTESAK+ NRRLQKKYNG+ T+PRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKS
Sbjct: 61  RGNSKTESAKVRNRRLQKKYNGSSTKPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKS 120

Query: 167 MRPSPSCTTIEAAQHVGEELVKACEDLNIHEISSYDRNGFARGEKMQAFEIAISRYGLLQ 226
           MRPSPSCTTIEAAQHVGEELVKACEDLNIHEISSYDRNGFARGEKMQAFEIAISRYG LQ
Sbjct: 121 MRPSPSCTTIEAAQHVGEELVKACEDLNIHEISSYDRNGFARGEKMQAFEIAISRYGFLQ 180

Query: 227 R 228
           R
Sbjct: 181 R 181

[Close]

BLAST of Bhi07G001272 vs. ExPASy TrEMBL
Match: A0A6J1GYP6 (uncharacterized protein LOC111458689 OS=Cucurbita moschata OX=3662 GN=LOC111458689 PE=4 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 2.6e-84
Identity = 160/181 (88.40%), Postives = 166/181 (91.71%), Query Frame = 0


Query: 47  MPSLLLNTLNLKKVYGGMAFLNGPGLLSKTSTPFGLQSKPFNFPSLKTRNCDVKPLTIQA 106
           MPSL LNT+N +KV GGM FLN PGLLSKT TPF  QSKPFNFPSLK R+CDVKPL IQA
Sbjct: 1   MPSLPLNTINFEKVNGGMHFLNVPGLLSKTPTPFWFQSKPFNFPSLKRRHCDVKPLMIQA 60

Query: 107 RGNSKTESAKITNRRLQKKYNGTPTRPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKS 166
           RGNSKTESAK+ NRR QKKYNG+ T+PRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKS
Sbjct: 61  RGNSKTESAKVRNRRFQKKYNGSSTKPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKS 120

Query: 167 MRPSPSCTTIEAAQHVGEELVKACEDLNIHEISSYDRNGFARGEKMQAFEIAISRYGLLQ 226
           MRPSPSCTTIEAAQHVGEELVKACEDLNIHEISSYDRNGFARGEKMQAFEIAIS YG LQ
Sbjct: 121 MRPSPSCTTIEAAQHVGEELVKACEDLNIHEISSYDRNGFARGEKMQAFEIAISGYGFLQ 180

Query: 227 R 228
           R
Sbjct: 181 R 181

[Close]

BLAST of Bhi07G001272 vs. ExPASy TrEMBL
Match: A0A6J1DC55 (uncharacterized protein LOC111019142 OS=Momordica charantia OX=3673 GN=LOC111019142 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 2.2e-83
Identity = 156/181 (86.19%), Postives = 167/181 (92.27%), Query Frame = 0


Query: 47  MPSLLLNTLNLKKVYGGMAFLNGPGLLSKTSTPFGLQSKPFNFPSLKTRNCDVKPLTIQA 106
           MP  LLNTL+ +KVYGGM  +N PGLLSK+STPFG QSKPFNFPSLK++NCD+KPL IQA
Sbjct: 1   MPLSLLNTLDFQKVYGGMPLVNLPGLLSKSSTPFGFQSKPFNFPSLKSKNCDLKPLIIQA 60

Query: 107 RGNSKTESAKITNRRLQKKYNGTPTRPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKS 166
           RG+SK ESAKI NRR+QKKYNGTP RPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKS
Sbjct: 61  RGHSKPESAKIRNRRMQKKYNGTPKRPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKS 120

Query: 167 MRPSPSCTTIEAAQHVGEELVKACEDLNIHEISSYDRNGFARGEKMQAFEIAISRYGLLQ 226
           MRP+PSCTTIEAAQ+VGEELVK CEDLNIHEISSYDRNGFARGEKMQAFEIAIS YG LQ
Sbjct: 121 MRPNPSCTTIEAAQYVGEELVKTCEDLNIHEISSYDRNGFARGEKMQAFEIAISHYGFLQ 180

Query: 227 R 228
           R
Sbjct: 181 R 181

[Close]

BLAST of Bhi07G001272 vs. ExPASy TrEMBL
Match: A0A0A0KQM5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G605190 PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 2.9e-83
Identity = 159/180 (88.33%), Postives = 166/180 (92.22%), Query Frame = 0


Query: 47  MPSLLLNTLNLKKVYGGMAFLNGPGLLSKTSTPFGLQSKPFNFPSLKTRNCDVKPLTIQA 106
           M SLLLNT NLKKV+GGMAF N  GLL KTS PFGLQSKPF+F SLKT++CDVKPLTIQA
Sbjct: 1   MSSLLLNTSNLKKVHGGMAFQNVSGLLLKTSMPFGLQSKPFDFRSLKTKHCDVKPLTIQA 60

Query: 107 RGNSKTESAKITNRRLQKKYNGTPTRPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKS 166
           RGNSKTESAK+ NRR+QKKYNGTPTRPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKS
Sbjct: 61  RGNSKTESAKVRNRRMQKKYNGTPTRPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKS 120

Query: 167 MRPSPSCTTIEAAQHVGEELVKACEDLNIHEISSYDRNGFARGEKMQAFEIAISRYGLLQ 226
           MRP+PSCTTIEAAQHVGEELVK C DLNIHEIS YDRNGFA GEKMQAFEIAISRYG LQ
Sbjct: 121 MRPTPSCTTIEAAQHVGEELVKVCMDLNIHEISLYDRNGFACGEKMQAFEIAISRYGFLQ 180

[Close]

BLAST of Bhi07G001272 vs. ExPASy TrEMBL
Match: A0A1S3BEE0 (50S ribosomal protein L18 OS=Cucumis melo OX=3656 GN=LOC103489126 PE=4 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 7.1e-82
Identity = 158/181 (87.29%), Postives = 165/181 (91.16%), Query Frame = 0


Query: 47  MPSLLLNTLNLKKVYGGMAFLNGPGLLSKTSTPFGLQSKPFNFPSLKTRNCDVKPLTIQA 106
           M SLLLNT N KKV+GG+AF N  GLL KTS PFGLQSK F+F SLKT++CDVKPL IQA
Sbjct: 1   MSSLLLNTSNFKKVHGGVAFQNVSGLLLKTSMPFGLQSKSFDFRSLKTKHCDVKPLMIQA 60

Query: 107 RGNSKTESAKITNRRLQKKYNGTPTRPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKS 166
           RGNSKTESAK+ NRRLQKKYNGTPTRPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKS
Sbjct: 61  RGNSKTESAKVRNRRLQKKYNGTPTRPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKS 120

Query: 167 MRPSPSCTTIEAAQHVGEELVKACEDLNIHEISSYDRNGFARGEKMQAFEIAISRYGLLQ 226
           MRP+ SCTTIEAAQHVGEELVK C DLNIHEISSYDRNGFARGEKMQAFEIAISRYG LQ
Sbjct: 121 MRPTLSCTTIEAAQHVGEELVKVCGDLNIHEISSYDRNGFARGEKMQAFEIAISRYGFLQ 180

Query: 227 R 228
           R
Sbjct: 181 R 181

The following BLAST results are available for this feature:

BLAST of Bhi07G001272 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G14205.1	3.9e-48	64.47	Ribosomal L18p/L5e family protein	[more]
AT1G48350.1	1.6e-14	33.57	Ribosomal L18p/L5e family protein	[more]

BLAST of Bhi07G001272 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P82195	1.4e-13	33.33	50S ribosomal protein L18, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL18 P...	[more]
Q9SX68	2.3e-13	33.57	50S ribosomal protein L18, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL1...	[more]
A9FGF8	3.3e-12	39.05	50S ribosomal protein L18 OS=Sorangium cellulosum (strain So ce56) OX=448385 GN=...	[more]
Q8SAY0	2.2e-11	39.25	50S ribosomal protein L18, chloroplastic OS=Oryza sativa subsp. japonica OX=3994...	[more]
P04453	1.8e-10	37.39	50S ribosomal protein L18 OS=Mycoplasma capricolum subsp. capricolum (strain Cal...	[more]

BLAST of Bhi07G001272 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JIY0	3.6e-86	90.06	uncharacterized protein LOC111484997 OS=Cucurbita maxima OX=3661 GN=LOC111484997...	[more]
A0A6J1GYP6	2.6e-84	88.40	uncharacterized protein LOC111458689 OS=Cucurbita moschata OX=3662 GN=LOC1114586...	[more]
A0A6J1DC55	2.2e-83	86.19	uncharacterized protein LOC111019142 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A0A0KQM5	2.9e-83	88.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G605190 PE=4 SV=1	[more]
A0A1S3BEE0	7.1e-82	87.29	50S ribosomal protein L18 OS=Cucumis melo OX=3656 GN=LOC103489126 PE=4 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005484	Ribosomal protein L18	PFAM	PF00861	Ribosomal_L18p	coord: 111..218 e-value: 1.2E-15 score: 57.9
IPR005484	Ribosomal protein L18	PANTHER	PTHR12899	39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL	coord: 74..227
None	No IPR available	GENE3D	3.30.420.100		coord: 110..225 e-value: 4.1E-21 score: 77.6
None	No IPR available	PANTHER	PTHR12899:SF8	RIBOSOMAL L18P/L5E FAMILY PROTEIN	coord: 74..227
None	No IPR available	CDD	cd00432	Ribosomal_L18_L5e	coord: 123..224 e-value: 7.94658E-23 score: 86.8251
None	No IPR available	SUPERFAMILY	53137	Translational machinery components	coord: 111..223

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi07M001272	Bhi07M001272	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005840	ribosome
molecular_function	GO:0008097	5S rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome