Bhi07G001215 (gene) Wax gourd (B227) v1

Overview


Name	Bhi07G001215
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	phosphoglycerate kinase
Location	chr7: 43265902 .. 43267995 (+)
RNA-Seq Expression	Bhi07G001215
Synteny	Bhi07G001215

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCGGAAACTGAAAATTTTGGCGTGCGCATTTGTTGTATTTCCCTCCTTCCCCATTTCTTTCCCTTGCTCTAATCTCTACAATTCACTACTCACCCTCTACTAGTTTTTTCTCATGTTCTAAAAAAAGTTCTTCTGGTTAAACTTTGTCCATGCTTCTCTAATTTCTCATCTATTTCTTCCTCGTAAGTTTCACTAATCCGATCCATCTTTTCCCTCTCCCTAACTTTTTCTTATATGTGTTCCTTTTTTATTCATTGTTTTCTATGTGGTTTTTCTTAGGAAATTCTTATGGAAACCAAAATGAGCATCGATACATTCAAGGAGGCCAATTTGAAGGGAAAGAGGGTGTTTGTGAGAGATGATTTCAATTTCAACATCATCGATGACACCATAATCAGTATTTGCTCAACCATGGTATTGGGTCATCCTGTCCAGCCATCTAGTGCGATTCTTCTTCTCTTTCTCCACATTTTCTTTTTGTCTCTCATTCTTGTTCTTGAAATATTTAGGCCTTAATTTATATATTATGCTTTTGTCAACTCTCTACCTCTGTCGAACAGTCGTTGATGGAGGTAGATCCATCTCTGATCTACACTATTCTACCATACACACAAATCCAAAACTTCCCTGCTCTTTGTCCAATCGCACGTGCTTTCGTCATCGACCAGATTGTGCATTCTACTCAGATCTGAATGTTTATGTGTGCAACTTTGTTTTAATATTGGTGTTCTACCATTCAAACTCGATCCAGTCCAGAACTTGATCCTAACTCGATCCAAGTCTTGATCTGGTCCAGAACTCGATCTTCGATCCCCACCGTGAAGAACTCGATCTGGTCCAAAACTTGATCCGGTCTAGAACTCGATCCAAGTCTTGATCTTATCTAGAACTCAATGCTCCCTATTCGATGCTCCCCACTGATTGTGTTTTTTCTTTTTATCAATATTTTCTTTTCTCTTCATTGATGACTAGATTATTGATCAAGTTGAAGTAGTGGTGAGTTCGTTGATGTTATTTTCTTTTCTTTTTTATCAATATTTTATTTTTATCACATTTTATTTTAGTGGTGAGTTCGCTGAGGGATTTTGAAGAAGGAATAAGAACAAGAGATGAAGTTGAAGAAGAAGACAACGACTTAAGGAGGGAATCACAATCAACTTATTGAGAAAGAACATGGTAAATTTACAATCCCTTAAATATGAAACTCTTTTAACTCTTCGTTGAAATTTGATAATTTCCTAATCTTCTTCTGTCATATTTTTATTTTTGAAACTTGAATTCTCAAAATGTAGAACTATTTGTGTTCCGATTCTCTTATTTTTATTAATGTTATTTGGTAGGAAGTTGTAAAATTGGTCATTCATTTTTGTTCTTTCATGAGTTTACAATCGTAACAATATCTCACCAATAATAGTTGTGCTATTTGAGATCATTTATGTTGGGATGCTTGGAGGATTTTGTTGGCCAATAGTTGACTTAAGTTGTTACTGTATAGATAAATAAAATAGTAGGAGATTGTTATAGTATCTCTAATTATGATCTCTTTATACAATAAATTTGTGTAGGCTAGTTTAGATCTTTTATAACAACAAGAGGAACATTTAGATTTAAAGGATTGCATATTGAGTGAAACTTGAAGTGATAATTAGAGATTGTATTGCTTGTGATAAAGCGTTTTGATAACTTTCTTAATTACTGGTTATATTACTTGTGTTGAAGCCTTTTAGATCTCAATGTCAATTTCAGCTCAAGAGATAACTTCATCACCAAATTCTCTCCATTGTTTGGCTTAATTTGACTCATGATCCAACTTTCACTTCATCCAACTCGACAACTCAAAGCTCTTTATCCATAATCTCAATCTAGTTTGACTCAAAGATGAAAGCTTAATTCTATGATGACATAATTTGAATGCTTGTAAATTTTCTATTTTGTGAACTTATATAGTTGCAAGTTATATTTGATGTACTTTTATTGTTGGATAATTTCATTATTTTATAAGATACAAATGGATTACAAATTTCTATTATTAAAGGAAGTCATGATATTTAATGCATTACCA

mRNA sequence

AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCGGAAACTGAAAATTTTGGCGTGCGCATTTGTTGTATTTCCCTCCTTCCCCATTTCTTTCCCTTGCTCTAATCTCTACAATTCACTACTCACCCTCTACTAGTTTTTTCTCATGTTCTAAAAAAAGTTCTTCTGGTTAAACTTTGTCCATGCTTCTCTAATTTCTCATCTATTTCTTCCTCGAAATTCTTATGGAAACCAAAATGAGCATCGATACATTCAAGGAGGCCAATTTGAAGGGAAAGAGGGTGTTTGTGAGAGATGATTTCAATTTCAACATCATCGATGACACCATAATCAGTATTTGCTCAACCATGGTATTGGGTCATCCTGTCCAGCCATCTATGGTGAGTTCGCTGAGGGATTTTGAAGAAGGAATAAGAACAAGAGATGAAGTTGAAGAAGAAGACAACGACTTAAGGAGGGAATCACAATCAACTTATTGAGAAAGAACATGCTCAAGAGATAACTTCATCACCAAATTCTCTCCATTGTTTGGCTTAATTTGACTCATGATCCAACTTTCACTTCATCCAACTCGACAACTCAAAGCTCTTTATCCATAATCTCAATCTAGTTTGACTCAAAGATGAAAGCTTAATTCTATGATGACATAATTTGAATGCTTGTAAATTTTCTATTTTGTGAACTTATATAGTTGCAAGTTATATTTGATGTACTTTTATTGTTGGATAATTTCATTATTTTATAAGATACAAATGGATTACAAATTTCTATTATTAAAGGAAGTCATGATATTTAATGCATTACCA

Coding sequence (CDS)

ATGGAAACCAAAATGAGCATCGATACATTCAAGGAGGCCAATTTGAAGGGAAAGAGGGTGTTTGTGAGAGATGATTTCAATTTCAACATCATCGATGACACCATAATCAGTATTTGCTCAACCATGGTATTGGGTCATCCTGTCCAGCCATCTATGGTGAGTTCGCTGAGGGATTTTGAAGAAGGAATAAGAACAAGAGATGAAGTTGAAGAAGAAGACAACGACTTAAGGAGGGAATCACAATCAACTTATTGA

Protein sequence

METKMSIDTFKEANLKGKRVFVRDDFNFNIIDDTIISICSTMVLGHPVQPSMVSSLRDFEEGIRTRDEVEEEDNDLRRESQSTY

Homology

[Close]

BLAST of Bhi07G001215 vs. TAIR 10
Match: AT1G79550.1 (phosphoglycerate kinase )

HSP 1 Score: 41.2 bits (95), Expect = 4.8e-04
Identity = 24/42 (57.14%), Postives = 26/42 (61.90%), Query Frame = 0


Query: 1  METKMSIDTFKEANLKGKRVFVRDDFNF------NIIDDTII 37
          M TK S+ T KEA+LKGK VFVR D N       NI DDT I
Sbjct: 1  MATKRSVGTLKEADLKGKSVFVRVDLNVPLDDNSNITDDTRI 42

[Close]

BLAST of Bhi07G001215 vs. TAIR 10
Match: AT1G79550.2 (phosphoglycerate kinase )

HSP 1 Score: 41.2 bits (95), Expect = 4.8e-04
Identity = 24/42 (57.14%), Postives = 26/42 (61.90%), Query Frame = 0


Query: 1  METKMSIDTFKEANLKGKRVFVRDDFNF------NIIDDTII 37
          M TK S+ T KEA+LKGK VFVR D N       NI DDT I
Sbjct: 1  MATKRSVGTLKEADLKGKSVFVRVDLNVPLDDNSNITDDTRI 42

The following BLAST results are available for this feature:

BLAST of Bhi07G001215 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G79550.1	4.8e-04	57.14	phosphoglycerate kinase	[more]
AT1G79550.2	4.8e-04	57.14	phosphoglycerate kinase	[more]

BLAST of Bhi07G001215 vs. TAIR 10


Match Name	E-value	Identity	Description

BLAST of Bhi07G001215 vs. TAIR 10


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..84

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi07M001215	Bhi07M001215	mRNA