Bhi07G000961 (gene) Wax gourd (B227) v1

Overview


Name	Bhi07G000961
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	mediator of RNA polymerase II transcription subunit 15a-like
Location	chr7: 36146565 .. 36148259 (+)
RNA-Seq Expression	Bhi07G000961
Synteny	Bhi07G000961

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAAATGATGCAATCCAAGCGGAAAAGGCATTCATCGTCTCTTCCCCTGGCATGCCTCCTTCAGCCTTTTTGGAGGAGGTAGTAGAATCAGTTCATGAGAATGACATATGCTGTGTTACTCCTCTCCAACGCTTGATCAAAATGGTTTGTTCGAAAAGATTTCAGTTTCATTTCTCGTAAGAAATTTTTTTTACATACATTATAGACATGCTGTTCTTGGCTCAAACTCAGGTAAACGAAATGTCACCAAAAGCGTTAAGTGCTTCTGTCAGTGACATAGATTCTCTTGTCTGTATGACTGATAGAGTATCTTCATCGGCACCTCTTAACAACTCCAAAGCTGCAGTTGGCGCGTATTTGGTGGGTGCAGATTCATCTCCTCTGAGAAGAAAATGTTCAAGATTTGGAGGCACTATTGGCTCAAGGAGAACAAGACACTACAGAAGTTTGATGGATTGTGAAGGTTTTGACTTGAATTCAAGTACAATTGAGGTGCGTGACCATCTATTGAGTTCTTTTTTTTTGTTTTAATTCAATGATTTGAAGGGGTGGAGAACCGAACCATCAACTTGTGGGATGGTAATTGGTGACTTATTCACTGAATTATGCTCAGATTAGTGATCATCTCCTTGGTTTATGTGGTTCAAACTTGAAAAGATGAAATTACGTGAGTGAACAAATTAGCCCTTTTGGGCAAATATGATCATGAACATTGCTGAGTAATAATAACTATGAGCTTAATTTTGATAATTTTCCTATAGATTCTGTTTAATTAATATGAGAAAATATAGTGTGAAGTACTTTACTCATGAATGTGAAATTAGCTTTCCACATCAAATGAGGTTAAATAGATCCATTGATGACATGATATTGATAAGATCCTTTATTTTATTTGATATGTCTCGAGTCTTGACTAGTATGCCTAGAATCGGTATGTGAATGGTAAAATTAAAATGACAAAATTACATATATTCTAATTCTTTCAAAAGTTGCAATATTATCCTTCACTTTTCATACACATTTCAAAACTACTTTTAGAGTAGAATTCCTCCAGAATTTTTAATGGAAATGGAGGCTTAAAATGGTGTGCCAGTGACCTATGCACTATAATAGTGTGGTGATCTTAATTTCTAGTTTAGGTCACTTCTAGACTACTTCAAACCCCAATTTCCATTCGAAATTCTAAAGGACTTCTACTCTAAAGATAGGATTGAAATGTTTATGAAAGGTCAAACGTAATATTGTAACTTTGGAAAGAATGGAGATATTTTTTTAATAAGAGAAAAAGTTCAATGGTTTTATTATTATTATTATCATTATTATTATTATTATTATTATAATTAACTGATTACCAAGTCTTGTAGTATCAAACAACTACTTTGTTCAATGTCGAATAGATTCTTTGTAAACTTCCTATTACTAACGACATATTTCTTTGATATATTCTTTCAAATACATCTGTTAATACAGACTCCTGATCATTCGCATTGGCATGGGTTTTCATTGCCGGAGAAGCAATCTTTATTTGAGGAAATTAGGAGGATAAATGAGCAGCTGATTGATACAGTGGTATCTATTTGTGACAAAGATACGATAACAATTGACAGAAGTGAAGGGATCATAGTTAAATGTTCTTTTGTTGCTATGTGCGCCCATTCAAATTTAAACTCACACCAAACTTCAGCTCCTCAG

mRNA sequence

ATGGTAAATGATGCAATCCAAGCGGAAAAGGCATTCATCGTCTCTTCCCCTGGCATGCCTCCTTCAGCCTTTTTGGAGGAGGTAGTAGAATCAGTTCATGAGAATGACATATGCTGTGTTACTCCTCTCCAACGCTTGATCAAAATGGTAAACGAAATGTCACCAAAAGCGTTAAGTGCTTCTGTCAGTGACATAGATTCTCTTGTCTGTATGACTGATAGAGTATCTTCATCGGCACCTCTTAACAACTCCAAAGCTGCAGTTGGCGCGTATTTGGTGGGTGCAGATTCATCTCCTCTGAGAAGAAAATGTTCAAGATTTGGAGGCACTATTGGCTCAAGGAGAACAAGACACTACAGAAGTTTGATGGATTGTGAAGGTTTTGACTTGAATTCAAGTACAATTGAGACTCCTGATCATTCGCATTGGCATGGGTTTTCATTGCCGGAGAAGCAATCTTTATTTGAGGAAATTAGGAGGATAAATGAGCAGCTGATTGATACAGTGGTATCTATTTGTGACAAAGATACGATAACAATTGACAGAAGTGAAGGGATCATAGTTAAATGTTCTTTTGTTGCTATGTGCGCCCATTCAAATTTAAACTCACACCAAACTTCAGCTCCTCAG

Coding sequence (CDS)

ATGGTAAATGATGCAATCCAAGCGGAAAAGGCATTCATCGTCTCTTCCCCTGGCATGCCTCCTTCAGCCTTTTTGGAGGAGGTAGTAGAATCAGTTCATGAGAATGACATATGCTGTGTTACTCCTCTCCAACGCTTGATCAAAATGGTAAACGAAATGTCACCAAAAGCGTTAAGTGCTTCTGTCAGTGACATAGATTCTCTTGTCTGTATGACTGATAGAGTATCTTCATCGGCACCTCTTAACAACTCCAAAGCTGCAGTTGGCGCGTATTTGGTGGGTGCAGATTCATCTCCTCTGAGAAGAAAATGTTCAAGATTTGGAGGCACTATTGGCTCAAGGAGAACAAGACACTACAGAAGTTTGATGGATTGTGAAGGTTTTGACTTGAATTCAAGTACAATTGAGACTCCTGATCATTCGCATTGGCATGGGTTTTCATTGCCGGAGAAGCAATCTTTATTTGAGGAAATTAGGAGGATAAATGAGCAGCTGATTGATACAGTGGTATCTATTTGTGACAAAGATACGATAACAATTGACAGAAGTGAAGGGATCATAGTTAAATGTTCTTTTGTTGCTATGTGCGCCCATTCAAATTTAAACTCACACCAAACTTCAGCTCCTCAG

Protein sequence

MVNDAIQAEKAFIVSSPGMPPSAFLEEVVESVHENDICCVTPLQRLIKMVNEMSPKALSASVSDIDSLVCMTDRVSSSAPLNNSKAAVGAYLVGADSSPLRRKCSRFGGTIGSRRTRHYRSLMDCEGFDLNSSTIETPDHSHWHGFSLPEKQSLFEEIRRINEQLIDTVVSICDKDTITIDRSEGIIVKCSFVAMCAHSNLNSHQTSAPQ

Homology

[Close]

BLAST of Bhi07G000961 vs. TAIR 10
Match: AT1G15780.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI BLink). )

HSP 1 Score: 80.1 bits (196), Expect = 2.3e-15
Identity = 61/189 (32.28%), Postives = 96/189 (50.79%), Query Frame = 0


Query: 42   PLQRLIKMVNEMSPKALSASVSDIDSLVCMTDRVSSSAPLNNSKAAVGAYLVGADSSPLR 101
            P++RLI+ V  +SP+ALS++VSDI S+V M DR++ SAP N S+A+VG  LV      L+
Sbjct: 1046 PIERLIRAVKSISPQALSSAVSDIGSVVSMVDRIAGSAPGNGSRASVGEDLVAMTKCRLQ 1105

Query: 102  -RKCSRFGGTIGSRRTRHYRSLMDCEGFDL--------------NSSTIETPDHSHWHGF 161
             R      G + +++ + + + M      L               +S +E+   S     
Sbjct: 1106 ARNFMTQEGMMATKKMKRHTTAMPLSVASLGGSVGDNYKQFAGSETSDLESTATSDGKKA 1165

Query: 162  SLPEKQSLFEEIRRINEQLIDTVVSICDKD--------TITIDRSEGIIVKCSFVAMCAH 208
                + +L EEI+ IN++LIDTVV I D +         I+    EG  V+ SF+A+   
Sbjct: 1166 RTETEHALLEEIKEINQRLIDTVVEISDDEDAADPSEVAISSIGCEGTTVRFSFIAVSLS 1225

[Close]

BLAST of Bhi07G000961 vs. TAIR 10
Match: AT2G10440.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15780.1); Has 8319 Blast hits to 5104 proteins in 317 species: Archae - 0; Bacteria - 285; Metazoa - 1706; Fungi - 535; Plants - 320; Viruses - 18; Other Eukaryotes - 5455 (source: NCBI BLink). )

HSP 1 Score: 58.5 bits (140), Expect = 7.3e-09
Identity = 47/175 (26.86%), Postives = 79/175 (45.14%), Query Frame = 0


Query: 42  PLQRLIKMVNEMSPKALSASVSDIDSLVCMTDRVSSSAPLNNSKAAVGAYLVGADSSPLR 101
           P+ RLIK     SPK+L+ SVS+I S++ M D +  S P +    A     +G D S   
Sbjct: 659 PIDRLIKAFQAASPKSLAESVSEISSVISMVDMIGGSFPSSGGSRAG----LGEDLSERT 718

Query: 102 RKCSRFGGTIGSRRTRHYRSLM---------DCEGFDLNSSTIETPDHSHWHGFSLPEKQ 161
           R  +    T  S+R +   +++           E      S + +   S     ++    
Sbjct: 719 RNFTTHEETNLSKRMKRSINIVPPDMSSQIDSYEQLSSLESEVVSTTSSGLKVNNIAPGY 778

Query: 162 SLFEEIRRINEQLIDTVVSICDKDTITIDRSEGIIVKCSFVAMCAHSNLNSHQTS 208
           +L +EI+  N +L++TVV ICD+D++      G IV C++  +   +    H  S
Sbjct: 779 ALLQEIKETNGRLVETVVEICDEDSL------GTIVTCTYAPVALSATFKDHYKS 823

[Close]

BLAST of Bhi07G000961 vs. TAIR 10
Match: AT2G10440.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15780.1); Has 1628 Blast hits to 1350 proteins in 149 species: Archae - 0; Bacteria - 39; Metazoa - 480; Fungi - 159; Plants - 187; Viruses - 2; Other Eukaryotes - 761 (source: NCBI BLink). )

HSP 1 Score: 58.5 bits (140), Expect = 7.3e-09
Identity = 47/175 (26.86%), Postives = 79/175 (45.14%), Query Frame = 0


Query: 42  PLQRLIKMVNEMSPKALSASVSDIDSLVCMTDRVSSSAPLNNSKAAVGAYLVGADSSPLR 101
           P+ RLIK     SPK+L+ SVS+I S++ M D +  S P +    A     +G D S   
Sbjct: 579 PIDRLIKAFQAASPKSLAESVSEISSVISMVDMIGGSFPSSGGSRAG----LGEDLSERT 638

Query: 102 RKCSRFGGTIGSRRTRHYRSLM---------DCEGFDLNSSTIETPDHSHWHGFSLPEKQ 161
           R  +    T  S+R +   +++           E      S + +   S     ++    
Sbjct: 639 RNFTTHEETNLSKRMKRSINIVPPDMSSQIDSYEQLSSLESEVVSTTSSGLKVNNIAPGY 698

Query: 162 SLFEEIRRINEQLIDTVVSICDKDTITIDRSEGIIVKCSFVAMCAHSNLNSHQTS 208
           +L +EI+  N +L++TVV ICD+D++      G IV C++  +   +    H  S
Sbjct: 699 ALLQEIKETNGRLVETVVEICDEDSL------GTIVTCTYAPVALSATFKDHYKS 743

[Close]

BLAST of Bhi07G000961 vs. TAIR 10
Match: AT1G15770.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 48.9 bits (115), Expect = 5.8e-06
Identity = 25/62 (40.32%), Postives = 40/62 (64.52%), Query Frame = 0


Query: 42  PLQRLIKMVNEMSPKALSASVSDIDSLVCMTDRVSSSAPLNNSKAAVGAYLVGADSSPLR 101
           P++RLI+ +  +SP+ALS++V DI S+V M DR++ S P   S+A+ G  LV      L+
Sbjct: 192 PIERLIRAMKSISPQALSSAVCDIRSVVSMVDRIAGSVPGKGSRASFGVDLVAMTKCHLQ 251

Query: 102 RK 104
            +
Sbjct: 252 ER 253

[Close]

BLAST of Bhi07G000961 vs. ExPASy Swiss-Prot
Match: F4I171 (Mediator of RNA polymerase II transcription subunit 15a OS=Arabidopsis thaliana OX=3702 GN=MED15A PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.3e-14
Identity = 61/189 (32.28%), Postives = 96/189 (50.79%), Query Frame = 0


Query: 42   PLQRLIKMVNEMSPKALSASVSDIDSLVCMTDRVSSSAPLNNSKAAVGAYLVGADSSPLR 101
            P++RLI+ V  +SP+ALS++VSDI S+V M DR++ SAP N S+A+VG  LV      L+
Sbjct: 1046 PIERLIRAVKSISPQALSSAVSDIGSVVSMVDRIAGSAPGNGSRASVGEDLVAMTKCRLQ 1105

Query: 102  -RKCSRFGGTIGSRRTRHYRSLMDCEGFDL--------------NSSTIETPDHSHWHGF 161
             R      G + +++ + + + M      L               +S +E+   S     
Sbjct: 1106 ARNFMTQEGMMATKKMKRHTTAMPLSVASLGGSVGDNYKQFAGSETSDLESTATSDGKKA 1165

Query: 162  SLPEKQSLFEEIRRINEQLIDTVVSICDKD--------TITIDRSEGIIVKCSFVAMCAH 208
                + +L EEI+ IN++LIDTVV I D +         I+    EG  V+ SF+A+   
Sbjct: 1166 RTETEHALLEEIKEINQRLIDTVVEISDDEDAADPSEVAISSIGCEGTTVRFSFIAVSLS 1225

[Close]

BLAST of Bhi07G000961 vs. ExPASy Swiss-Prot
Match: Q9SHV7 (Probable mediator of RNA polymerase II transcription subunit 15c OS=Arabidopsis thaliana OX=3702 GN=MED15C PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.0e-07
Identity = 47/175 (26.86%), Postives = 79/175 (45.14%), Query Frame = 0


Query: 42  PLQRLIKMVNEMSPKALSASVSDIDSLVCMTDRVSSSAPLNNSKAAVGAYLVGADSSPLR 101
           P+ RLIK     SPK+L+ SVS+I S++ M D +  S P +    A     +G D S   
Sbjct: 659 PIDRLIKAFQAASPKSLAESVSEISSVISMVDMIGGSFPSSGGSRAG----LGEDLSERT 718

Query: 102 RKCSRFGGTIGSRRTRHYRSLM---------DCEGFDLNSSTIETPDHSHWHGFSLPEKQ 161
           R  +    T  S+R +   +++           E      S + +   S     ++    
Sbjct: 719 RNFTTHEETNLSKRMKRSINIVPPDMSSQIDSYEQLSSLESEVVSTTSSGLKVNNIAPGY 778

Query: 162 SLFEEIRRINEQLIDTVVSICDKDTITIDRSEGIIVKCSFVAMCAHSNLNSHQTS 208
           +L +EI+  N +L++TVV ICD+D++      G IV C++  +   +    H  S
Sbjct: 779 ALLQEIKETNGRLVETVVEICDEDSL------GTIVTCTYAPVALSATFKDHYKS 823

[Close]

BLAST of Bhi07G000961 vs. ExPASy Swiss-Prot
Match: F4I169 (Probable mediator of RNA polymerase II transcription subunit 15b OS=Arabidopsis thaliana OX=3702 GN=MED15B PE=3 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 8.1e-05
Identity = 25/62 (40.32%), Postives = 40/62 (64.52%), Query Frame = 0


Query: 42  PLQRLIKMVNEMSPKALSASVSDIDSLVCMTDRVSSSAPLNNSKAAVGAYLVGADSSPLR 101
           P++RLI+ +  +SP+ALS++V DI S+V M DR++ S P   S+A+ G  LV      L+
Sbjct: 192 PIERLIRAMKSISPQALSSAVCDIRSVVSMVDRIAGSVPGKGSRASFGVDLVAMTKCHLQ 251

Query: 102 RK 104
            +
Sbjct: 252 ER 253

[Close]

BLAST of Bhi07G000961 vs. ExPASy TrEMBL
Match: A0A6J1GWK1 (mediator of RNA polymerase II transcription subunit 15a-like OS=Cucurbita moschata OX=3662 GN=LOC111458234 PE=4 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 1.0e-79
Identity = 165/222 (74.32%), Postives = 179/222 (80.63%), Query Frame = 0


Query: 1   MVNDAIQAEKAFIVSSPGMPPSAFLEEVVESVHENDICCVTPLQRLIKMVNEMSPKALSA 60
           +VNDA QAEKAFIVS+PGM PS+ LEEV +S  +ND CCVTPLQRLIKMVN MSPKALSA
Sbjct: 100 IVNDAAQAEKAFIVSTPGMSPSSLLEEVTDSDRDNDKCCVTPLQRLIKMVNVMSPKALSA 159

Query: 61  SVSDIDSLVCMTDRVSSSAPLNNSKAAVGAYLVGADSSPLRRKCSRFGGTIGSRRTRHYR 120
           SVSDIDS+VCMTDRVSSSAPLN SK AVG  L G  +S LRRKCSRFGGTIGSRRTRHYR
Sbjct: 160 SVSDIDSIVCMTDRVSSSAPLNKSKGAVGMDLAGTVASRLRRKCSRFGGTIGSRRTRHYR 219

Query: 121 SLMDCEGFDLN------SSTIETPDHSHWHGFSLPEKQSLFEEIRRINEQLIDTVVSICD 180
            LMDCEGFDL+      S  IETP HS+WHGFSLP KQSL EEIRRINEQLI T VSICD
Sbjct: 220 CLMDCEGFDLSSLFTQRSRIIETPKHSNWHGFSLPVKQSLLEEIRRINEQLIYTEVSICD 279

Query: 181 KDTITID------RSEGIIVKCSFVAMCAHSNLNSHQTSAPQ 211
           KD +T D      RSEGI+V+CSF A+C  S+L SHQTSA Q
Sbjct: 280 KDMVTTDPGATIGRSEGILVECSFGAVCTLSHLISHQTSAIQ 321

[Close]

BLAST of Bhi07G000961 vs. ExPASy TrEMBL
Match: A0A6J1JBE6 (mediator of RNA polymerase II transcription subunit 15a-like OS=Cucurbita maxima OX=3661 GN=LOC111482923 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 2.3e-79
Identity = 164/222 (73.87%), Postives = 179/222 (80.63%), Query Frame = 0


Query: 1   MVNDAIQAEKAFIVSSPGMPPSAFLEEVVESVHENDICCVTPLQRLIKMVNEMSPKALSA 60
           +VNDA QAEKAFIVS+PGM PS+ LEEV +S  +ND CCVTPLQRLIKMVN MSPKALSA
Sbjct: 100 IVNDAAQAEKAFIVSTPGMSPSSLLEEVTDSDRDNDKCCVTPLQRLIKMVNVMSPKALSA 159

Query: 61  SVSDIDSLVCMTDRVSSSAPLNNSKAAVGAYLVGADSSPLRRKCSRFGGTIGSRRTRHYR 120
           SVSDIDS+VCMTDRVSSSAPLN SK AVG  L G  +S LRRKCSRFGGTIGSRRTRHYR
Sbjct: 160 SVSDIDSIVCMTDRVSSSAPLNKSKGAVGMDLAGTVASRLRRKCSRFGGTIGSRRTRHYR 219

Query: 121 SLMDCEGFDLN------SSTIETPDHSHWHGFSLPEKQSLFEEIRRINEQLIDTVVSICD 180
            LMDCEGFDL+      S  IETP HS+WHGFSLP KQSL EEIRRINEQLI T VSICD
Sbjct: 220 CLMDCEGFDLSSLFTQRSRIIETPKHSNWHGFSLPVKQSLLEEIRRINEQLIYTEVSICD 279

Query: 181 KDTITID------RSEGIIVKCSFVAMCAHSNLNSHQTSAPQ 211
           KD +T D      +SEGI+V+CSF A+C  S+L SHQTSA Q
Sbjct: 280 KDMVTTDPAATIGKSEGILVECSFGAVCTLSHLISHQTSAIQ 321

[Close]

BLAST of Bhi07G000961 vs. ExPASy TrEMBL
Match: A0A6J1CEI3 (mediator of RNA polymerase II transcription subunit 15a-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111010000 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 5.7e-70
Identity = 151/230 (65.65%), Postives = 172/230 (74.78%), Query Frame = 0


Query: 1   MVNDAIQAEKAFIVSSPGMPPSAFLEEVVESVHENDICCVTPLQRLIKMVNEMSPKALSA 60
           +VNDA+Q EK FI+S+PGM PSA LEEV ES  +NDIC VTPLQRL+KMVN MSPKALSA
Sbjct: 33  IVNDAVQEEKPFIISTPGMSPSALLEEVSESDRDNDICSVTPLQRLLKMVNVMSPKALSA 92

Query: 61  SVSDIDSLVCMTDRVSSSAPLNNSKAAVGAYLVGADSSPLRRKCSRFGGTIGSRRTRHYR 120
           S+SDIDS+VCMTDRV+SSAPLN SKA +   LVG  +S LR++CS FGG+ GSRRTRH R
Sbjct: 93  SISDIDSIVCMTDRVASSAPLNKSKAEISEDLVGTVTSRLRKRCSIFGGSTGSRRTRHCR 152

Query: 121 S---------LMDCEGFDLNS-----STIETPDHSHWHGFSLPEKQSLFEEIRRINEQLI 180
           +         +M CE +DLNS     S IETP+HSHW GFSLP KQ L EEIR+INEQLI
Sbjct: 153 NTRMYTSSRRMMYCESYDLNSTFTERSRIETPEHSHWRGFSLPFKQYLLEEIRKINEQLI 212

Query: 181 DTVVSICDKDTITI------DRSEGIIVKCSFVAMCAHSNLNSHQTSAPQ 211
           DTVVS+CDKD IT       DRSEGIIV+CSF AM   SN  S Q SA Q
Sbjct: 213 DTVVSVCDKDMITTDNAATNDRSEGIIVECSFAAMRISSNKISQQASALQ 262

[Close]

BLAST of Bhi07G000961 vs. ExPASy TrEMBL
Match: A0A6J1CCM7 (mediator of RNA polymerase II transcription subunit 15a-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010000 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 5.7e-70
Identity = 151/230 (65.65%), Postives = 172/230 (74.78%), Query Frame = 0


Query: 1   MVNDAIQAEKAFIVSSPGMPPSAFLEEVVESVHENDICCVTPLQRLIKMVNEMSPKALSA 60
           +VNDA+Q EK FI+S+PGM PSA LEEV ES  +NDIC VTPLQRL+KMVN MSPKALSA
Sbjct: 33  IVNDAVQEEKPFIISTPGMSPSALLEEVSESDRDNDICSVTPLQRLLKMVNVMSPKALSA 92

Query: 61  SVSDIDSLVCMTDRVSSSAPLNNSKAAVGAYLVGADSSPLRRKCSRFGGTIGSRRTRHYR 120
           S+SDIDS+VCMTDRV+SSAPLN SKA +   LVG  +S LR++CS FGG+ GSRRTRH R
Sbjct: 93  SISDIDSIVCMTDRVASSAPLNKSKAEISEDLVGTVTSRLRKRCSIFGGSTGSRRTRHCR 152

Query: 121 S---------LMDCEGFDLNS-----STIETPDHSHWHGFSLPEKQSLFEEIRRINEQLI 180
           +         +M CE +DLNS     S IETP+HSHW GFSLP KQ L EEIR+INEQLI
Sbjct: 153 NTRMYTSSRRMMYCESYDLNSTFTERSRIETPEHSHWRGFSLPFKQYLLEEIRKINEQLI 212

Query: 181 DTVVSICDKDTITI------DRSEGIIVKCSFVAMCAHSNLNSHQTSAPQ 211
           DTVVS+CDKD IT       DRSEGIIV+CSF AM   SN  S Q SA Q
Sbjct: 213 DTVVSVCDKDMITTDNAATNDRSEGIIVECSFAAMRISSNKISQQASALQ 262

[Close]

BLAST of Bhi07G000961 vs. ExPASy TrEMBL
Match: A0A2N9IJG5 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS52480 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.1e-23
Identity = 90/222 (40.54%), Postives = 120/222 (54.05%), Query Frame = 0


Query: 16  SPGMPPSAFLEE----------VVESVHENDICCVTPLQRLIKMVNEMSPKALSASVSDI 75
           +PGM  S  LEE          +   + +  I    P+QRLI +VN +S KALSASVSDI
Sbjct: 555 NPGMSASPLLEESNNIDGINCKMSTIISDESIVAEQPMQRLINLVNSISSKALSASVSDI 614

Query: 76  DSLVCMTDRVSSSAPLNNSKAAVGAYLVGADSSPLRRKCS-RFGGTIGSRRTRHYRSLMD 135
            S+VCMTD++SSS   N S+AA+G  LV  D S L+ + S R+    G+R+ +   + ++
Sbjct: 615 GSVVCMTDQMSSSPSGNGSRAAIGEDLVAMDKSHLQERYSTRWSDYSGTRKMKRCINALN 674

Query: 136 CE--GFDLNSS-----TIETP--DHSHWHGFSLPE---KQSLFEEIRRINEQLIDTVVSI 195
                  +N S      IE P  + S  +G   P    K +L EEIR IN+QLIDTVV +
Sbjct: 675 LSPLNVSINDSLGQWIDIEKPELESSATYGTKRPRIEAKHALLEEIREINQQLIDTVVVL 734

Query: 196 CDKDTI------TIDRSEGIIVKCSFVAMCAHSNLNSHQTSA 209
            D+DTI        D  EG IVKCSF A+    N  + Q SA
Sbjct: 735 SDEDTIPTAAAAATDGGEGTIVKCSFSAVAFSPNYEAQQVSA 776

The following BLAST results are available for this feature:

BLAST of Bhi07G000961 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15780.1	2.3e-15	32.28	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G10440.1	7.3e-09	26.86	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G10440.2	7.3e-09	26.86	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G15770.1	5.8e-06	40.32	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

BLAST of Bhi07G000961 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4I171	3.3e-14	32.28	Mediator of RNA polymerase II transcription subunit 15a OS=Arabidopsis thaliana ...	[more]
Q9SHV7	1.0e-07	26.86	Probable mediator of RNA polymerase II transcription subunit 15c OS=Arabidopsis ...	[more]
F4I169	8.1e-05	40.32	Probable mediator of RNA polymerase II transcription subunit 15b OS=Arabidopsis ...	[more]

BLAST of Bhi07G000961 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GWK1	1.0e-79	74.32	mediator of RNA polymerase II transcription subunit 15a-like OS=Cucurbita moscha...	[more]
A0A6J1JBE6	2.3e-79	73.87	mediator of RNA polymerase II transcription subunit 15a-like OS=Cucurbita maxima...	[more]
A0A6J1CEI3	5.7e-70	65.65	mediator of RNA polymerase II transcription subunit 15a-like isoform X2 OS=Momor...	[more]
A0A6J1CCM7	5.7e-70	65.65	mediator of RNA polymerase II transcription subunit 15a-like isoform X1 OS=Momor...	[more]
A0A2N9IJG5	1.1e-23	40.54	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS52480 PE=4 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33137:SF4	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED	coord: 41..209
IPR044661	Mediator of RNA polymerase II transcription subunit 15a/b/c-like	PANTHER	PTHR33137	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED	coord: 41..209

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi07M000961	Bhi07M000961	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
molecular_function	GO:0031490	chromatin DNA binding
molecular_function	GO:0003713	transcription coactivator activity