Bhi07G000858 (gene) Wax gourd (B227) v1

Overview
NameBhi07G000858
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionProtein Ycf2-like
Locationchr7: 32950173 .. 32950406 (-)
RNA-Seq ExpressionBhi07G000858
SyntenyBhi07G000858
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGTTTAAAGTTATTTCTCTCACCTCAACTAATGATGAACTAACCTCTCTGAACTATCAATACTTTCTAAATGTCCCGTCAAACGAAGTTAAGAAAGAGCGAAGTGAAGAAAAAGAAAATGAAAGTGTAAAGGATGGGACAAAGGAATCATTGAGAGAAGAAATTGAAGAAGTGAATGAGGAATTGAGCAACTTGAAGAAAACTATAGAAAAGGGAACAAATGAGTATTGA

mRNA sequence

ATGCAGTTTAAAGTTATTTCTCTCACCTCAACTAATGATGAACTAACCTCTCTGAACTATCAATACTTTCTAAATGTCCCGTCAAACGAAGTTAAGAAAGAGCGAAGTGAAGAAAAAGAAAATGAAAGTGTAAAGGATGGGACAAAGGAATCATTGAGAGAAGAAATTGAAGAAGTGAATGAGGAATTGAGCAACTTGAAGAAAACTATAGAAAAGGGAACAAATGAGTATTGA

Coding sequence (CDS)

ATGCAGTTTAAAGTTATTTCTCTCACCTCAACTAATGATGAACTAACCTCTCTGAACTATCAATACTTTCTAAATGTCCCGTCAAACGAAGTTAAGAAAGAGCGAAGTGAAGAAAAAGAAAATGAAAGTGTAAAGGATGGGACAAAGGAATCATTGAGAGAAGAAATTGAAGAAGTGAATGAGGAATTGAGCAACTTGAAGAAAACTATAGAAAAGGGAACAAATGAGTATTGA

Protein sequence

MQFKVISLTSTNDELTSLNYQYFLNVPSNEVKKERSEEKENESVKDGTKESLREEIEEVNEELSNLKKTIEKGTNEY
Homology
BLAST of Bhi07G000858 vs. ExPASy TrEMBL
Match: A0A5D3CVR6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00300 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.2e-09
Identity = 45/82 (54.88%), Postives = 58/82 (70.73%), Query Frame = 0

Query: 3   FKVISLTSTNDELTSLNYQYFLNVPSNEVKKERSEEKEN--------ESVKDGTKESLRE 62
           F VI  T T+DELTS N+Q+FLN   NEV+KERSEE E+        E+V D TK+SLR+
Sbjct: 98  FTVIPFTPTSDELTSPNFQFFLNDAPNEVEKERSEETEDENDKGDEEETVNDETKKSLRK 157

Query: 63  EIEEVNEELSNLKKTIEKGTNE 77
           EI+EV ++L +LK T+E G NE
Sbjct: 158 EIQEVKKDLESLKNTVENGQNE 179

BLAST of Bhi07G000858 vs. ExPASy TrEMBL
Match: A0A5D3B9P7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1278G00080 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.2e-09
Identity = 45/82 (54.88%), Postives = 58/82 (70.73%), Query Frame = 0

Query: 3   FKVISLTSTNDELTSLNYQYFLNVPSNEVKKERSEEKEN--------ESVKDGTKESLRE 62
           F VI  T T+DELTS N+Q+FLN   NEV+KERSEE E+        E+V D TK+SLR+
Sbjct: 98  FTVIPFTPTSDELTSPNFQFFLNDAPNEVEKERSEETEDENDKGDEEETVNDETKKSLRK 157

Query: 63  EIEEVNEELSNLKKTIEKGTNE 77
           EI+EV ++L +LK T+E G NE
Sbjct: 158 EIQEVKKDLESLKNTVENGQNE 179

BLAST of Bhi07G000858 vs. ExPASy TrEMBL
Match: A0A5A7SM53 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00980 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.6e-09
Identity = 45/82 (54.88%), Postives = 57/82 (69.51%), Query Frame = 0

Query: 3   FKVISLTSTNDELTSLNYQYFLNVPSNEVKKERSEEKEN--------ESVKDGTKESLRE 62
           F VI  T T+DELTS N+Q+FLN   NEV+KERSEE E+        E+V D TK+SLR+
Sbjct: 117 FTVIPFTPTSDELTSPNFQFFLNDAPNEVEKERSEETEDENDKGDEEETVNDETKKSLRK 176

Query: 63  EIEEVNEELSNLKKTIEKGTNE 77
           EI+EV  +L +LK T+E G NE
Sbjct: 177 EIQEVKNDLESLKNTVENGQNE 198

BLAST of Bhi07G000858 vs. ExPASy TrEMBL
Match: A0A5A7T6C2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00010 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.6e-09
Identity = 45/82 (54.88%), Postives = 57/82 (69.51%), Query Frame = 0

Query: 3   FKVISLTSTNDELTSLNYQYFLNVPSNEVKKERSEE--------KENESVKDGTKESLRE 62
           F VI  T T+DELTS N+Q+FLN   NEV+KERSEE         E E+V D TK+SLR+
Sbjct: 98  FTVIPFTPTSDELTSPNFQFFLNDAPNEVEKERSEEIEDENDKGDEEETVNDETKKSLRK 157

Query: 63  EIEEVNEELSNLKKTIEKGTNE 77
           EI+EV ++L +LK T+E G NE
Sbjct: 158 EIQEVKKDLESLKNTVENGQNE 179

BLAST of Bhi07G000858 vs. ExPASy TrEMBL
Match: A0A5A7VKZ2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G00340 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 6.0e-09
Identity = 44/82 (53.66%), Postives = 57/82 (69.51%), Query Frame = 0

Query: 3   FKVISLTSTNDELTSLNYQYFLNVPSNEVKKERSEEKEN--------ESVKDGTKESLRE 62
           F VI  T T+DEL S N+Q+FLN   NEV+KERSEE E+        E+V D TK+SLR+
Sbjct: 98  FTVIPFTPTSDELISPNFQFFLNDAPNEVEKERSEETEDENDKGDEEETVNDETKKSLRK 157

Query: 63  EIEEVNEELSNLKKTIEKGTNE 77
           EI+EV ++L +LK T+E G NE
Sbjct: 158 EIQEVKKDLESLKNTVENGKNE 179

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3CVR61.2e-0954.88Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3B9P71.2e-0954.88Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7SM531.6e-0954.88Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7T6C21.6e-0954.88Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7VKZ26.0e-0953.66Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 49..76
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..57

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi07M000858Bhi07M000858mRNA