Bhi07G000845 (gene) Wax gourd (B227) v1

Overview


Name	Bhi07G000845
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	UPF0769 protein C21orf59 homolog
Location	chr7: 32653956 .. 32654116 (-)
RNA-Seq Expression	Bhi07G000845
Synteny	Bhi07G000845

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGACAAGAAACGAGATTGTCTATTATCTCACCCTTCAGATGTGGAGCTTCTTGACGAGAATACGACTCAGCTAAAATTAGCTGGAAAAGAGCTCAAGAGGGAGAAACAACTTTGTGACTATATTGGAAGAAATGAGAAAATTAAGGTATTTCGTGATTAG

mRNA sequence

GTGACAAGAAACGAGATTGTCTATTATCTCACCCTTCAGATGTGGAGCTTCTTGACGAGAATACGACTCAGCTAAAATTAGCTGGAAAAGAGCTCAAGAGGGAGAAACAACTTTGTGACTATATTGGAAGAAATGAGAAAATTAAGGTATTTCGTGATTAG

Coding sequence (CDS)

GTGACAAGAAACGAGATTGTCTATTATCTCACCCTTCAGATGTGGAGCTTCTTGACGAGAATACGACTCAGCTAAAATTAGCTGGAAAAGAGCTCAAGAGGGAGAAACAACTTTGTGACTATATTGGAAGAAATGAGAAAATTAAGGTATTTCGTGATTAG

Protein sequence

DKKRDCLLSHPSDVELLDENTTQLKLAGKELKREKQLCDYIGRNEKIKVFRD

Homology

[Close]

BLAST of Bhi07G000845 vs. ExPASy TrEMBL
Match: A0A1S3CF44 (UPF0769 protein C21orf59 homolog OS=Cucumis melo OX=3656 GN=LOC103500174 PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 5.9e-08
Identity = 31/38 (81.58%), Postives = 34/38 (89.47%), Query Frame = 0


Query: 12  SDVELLDENTTQLKLAGKELKREKQLCDYIGRNEKIKV 50
           SDV LLD+ TTQLKLAGKEL +EKQLCDYIGRNEK K+
Sbjct: 124 SDVRLLDKETTQLKLAGKELMKEKQLCDYIGRNEKTKI 161

[Close]

BLAST of Bhi07G000845 vs. ExPASy TrEMBL
Match: A0A0A0KS44 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G177690 PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 7.7e-08
Identity = 31/38 (81.58%), Postives = 35/38 (92.11%), Query Frame = 0


Query: 12  SDVELLDENTTQLKLAGKELKREKQLCDYIGRNEKIKV 50
           SDV LLD++TTQLKLAGKEL +EKQLCDYIGRNEK K+
Sbjct: 125 SDVGLLDKDTTQLKLAGKELMKEKQLCDYIGRNEKTKI 162

[Close]

BLAST of Bhi07G000845 vs. ExPASy TrEMBL
Match: A0A6J1JQP0 (UPF0769 protein C21orf59 homolog B-like OS=Cucurbita maxima OX=3661 GN=LOC111488970 PE=3 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.1e-06
Identity = 30/38 (78.95%), Postives = 34/38 (89.47%), Query Frame = 0


Query: 12  SDVELLDENTTQLKLAGKELKREKQLCDYIGRNEKIKV 50
           SDV +L+E+TTQLKLAGKEL REKQL DYIGRNEK K+
Sbjct: 125 SDVGILNEDTTQLKLAGKELMREKQLSDYIGRNEKTKI 162

[Close]

BLAST of Bhi07G000845 vs. ExPASy TrEMBL
Match: A0A6J1GZ65 (UPF0769 protein C21orf59 homolog B-like OS=Cucurbita moschata OX=3662 GN=LOC111458205 PE=3 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.1e-06
Identity = 30/38 (78.95%), Postives = 33/38 (86.84%), Query Frame = 0


Query: 12  SDVELLDENTTQLKLAGKELKREKQLCDYIGRNEKIKV 50
           SDV LL E+TTQLKLAGKEL REKQL DY+GRNEK K+
Sbjct: 125 SDVGLLSEDTTQLKLAGKELMREKQLSDYVGRNEKTKI 162

[Close]

BLAST of Bhi07G000845 vs. ExPASy TrEMBL
Match: A0A314LGP7 (Uncharacterized protein OS=Nicotiana attenuata OX=49451 GN=A4A49_12999 PE=3 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 6.1e-05
Identity = 26/38 (68.42%), Postives = 32/38 (84.21%), Query Frame = 0


Query: 12  SDVELLDENTTQLKLAGKELKREKQLCDYIGRNEKIKV 50
           SD++LL+ENT QL  AGKEL R K+LCD+IGRNEK K+
Sbjct: 120 SDLQLLEENTLQLLWAGKELTRGKKLCDFIGRNEKTKI 157

The following BLAST results are available for this feature:

BLAST of Bhi07G000845 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi07G000845 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi07G000845 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CF44	5.9e-08	81.58	UPF0769 protein C21orf59 homolog OS=Cucumis melo OX=3656 GN=LOC103500174 PE=3 SV...	[more]
A0A0A0KS44	7.7e-08	81.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G177690 PE=3 SV=1	[more]
A0A6J1JQP0	1.1e-06	78.95	UPF0769 protein C21orf59 homolog B-like OS=Cucurbita maxima OX=3661 GN=LOC111488...	[more]
A0A6J1GZ65	1.1e-06	78.95	UPF0769 protein C21orf59 homolog B-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A314LGP7	6.1e-05	68.42	Uncharacterized protein OS=Nicotiana attenuata OX=49451 GN=A4A49_12999 PE=3 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021298	Cilia- and flagella-associated protein 298	PFAM	PF11069	CFAP298	coord: 23..49 e-value: 3.3E-7 score: 30.6

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi07M000845	Bhi07M000845	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0003352	regulation of cilium movement