Bhi07G000729 (gene) Wax gourd (B227) v1

Overview
NameBhi07G000729
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionCytochrome c oxidase assembly protein cox16
Locationchr7: 29203480 .. 29205154 (-)
RNA-Seq ExpressionBhi07G000729
SyntenyBhi07G000729
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTTTTCTATAGTTTGCACAATGACCAGCACTGAGGCAGGAATAGGTCAGTCTACAGAACCAAAGAAGATTGCCTCTGTTAACAATGCAACTCGGGCATCTCCATCCATGTTTAGAAGATGGGGCAGAAGACACCCATTTATCAGATATGGACTTCCAATGATCTCTCTCACGGTGCTTGGGGCAGTTGGTCTTGGTCATCTCTTGCAAGGGAGGTTAGTGGTTGCTGGTACTGTTTGAAGTTTTAAGATTCAAAGTGATTGTGCTGTCTTCTTTAGGAGTTCGGTTTAATTTACTATATCTTGTTTTCGAAATGGAAAAATATCTTTCCTCAGGATTGTGACGGCTCGATGTAGATTATCGAAACACTTGTTTTATACGAAAGAATGACATTGATTGCTAAAACCATTGATTCTCATAAAATGGACACCTTGCAATATGTTATTGTTGCAAGGACATGGGAACGGGTCTGGACTTTGCCTTGGAAGTGTTCATTGAGTCCATGGGATTGAGATTTGTGAACTGAGGCTAAAATGCTTTGAGAAGGGAAATTTTTTATAGAACCCGAATATATTTTTTGATAAACCAAGTGTTTGAGTTATTTGGACCCTTCCAATCTTGAAAATACTCTCAAACCCTACTTCATTATCCAAAATGTTGCCTATTGTCTCTATTTCCCGCCCCCTATTTATAACCAACAAGCCTAACAAAGTCTCTAACTAATCACTGATATATCCTTATAATATCCCAATTAGCATACCTATCAATTTAATGTACGGTCCTTCAACTTTATATTATCTACCGTATGGCCTACCTTACTATGAGACTACTTAGGGGTATATGGGTAAGATTAGCATGATGTTAGTGAGGGGTATTATGGATAATTAACTAGTGGCGTGTTGGCTATGGGAGTTATGGACTTTAGAGGGAGTGTGGATCATTTTGGTGAGAGTTTTGATTGTGGAACTTTGGGAGAGAGATACCCCTCTCGAAAAGCTATCGGTACATTTGTAATTTCTCTTGGTATTGCAATATATTCTTATCCTTGTGTTCTTTGTGTTTATTTTAGTTTTTTTTTTTTTTTGTTAGGAGGTATCCTAACACTTTCACAAGGATTTCCTGTACATCAATACCTTTCGTAGTGCTCTCCTTCATATCTTAGAATAGATTGTTAATAAACAGGAAAATACTTCCTCTCAGCTATCTGCACAGTAGTAAAAGTGTGAGTCATAGGTTGTTAGAAAATAATTTTCAAGACCATATTAGTTGTAATGTCTCCATAGTTCTATGTTTGTTTTTTTATGTCGTCTTATATGATGTTAGATCATCATTTTCTTATTTTCTACTTGATATTCTTTTAAAACACTTGTCGAATTCACGTTGTAGTTCAGTAAAGATATTGCGAAGGTAAGAGATGATCAAGAATGGGAGATCACCGAGATGAGAAAAGCCCTATCAAGAACAGGACCTATTGATGCGTATAAGCCAAAAAATATATCTTTAGAAGAAGAACTGAGGGTATTATTACTCTTTCTTGTTGCAATTCATTTGTTATTATCTGCAGTTTCACTATAAACAACGTGATTGTTAATGATTTTCAGGCTTTACAAGAGAAGGTAGACATTAACAACTACGAGTACAAGAGAATTCCAAAGCCTACTGACCAAACCTCCTAA

mRNA sequence

GTTTTTCTATAGTTTGCACAATGACCAGCACTGAGGCAGGAATAGGTCAGTCTACAGAACCAAAGAAGATTGCCTCTGTTAACAATGCAACTCGGGCATCTCCATCCATGTTTAGAAGATGGGGCAGAAGACACCCATTTATCAGATATGGACTTCCAATGATCTCTCTCACGGTGCTTGGGGCAGTTGGTCTTGGTCATCTCTTGCAAGGGAGTAAAGATATTGCGAAGGTAAGAGATGATCAAGAATGGGAGATCACCGAGATGAGAAAAGCCCTATCAAGAACAGGACCTATTGATGCGTATAAGCCAAAAAATATATCTTTAGAAGAAGAACTGAGGGCTTTACAAGAGAAGGTAGACATTAACAACTACGAGTACAAGAGAATTCCAAAGCCTACTGACCAAACCTCCTAA

Coding sequence (CDS)

GTTTTTCTATAGTTTGCACAATGACCAGCACTGAGGCAGGAATAGGTCAGTCTACAGAACCAAAGAAGATTGCCTCTGTTAACAATGCAACTCGGGCATCTCCATCCATGTTTAGAAGATGGGGCAGAAGACACCCATTTATCAGATATGGACTTCCAATGATCTCTCTCACGGTGCTTGGGGCAGTTGGTCTTGGTCATCTCTTGCAAGGGAGTAAAGATATTGCGAAGGTAAGAGATGATCAAGAATGGGAGATCACCGAGATGAGAAAAGCCCTATCAAGAACAGGACCTATTGATGCGTATAAGCCAAAAAATATATCTTTAGAAGAAGAACTGAGGGCTTTACAAGAGAAGGTAGACATTAACAACTACGAGTACAAGAGAATTCCAAAGCCTACTGACCAAACCTCCTAA

Protein sequence

FSIVCTMTSTEAGIGQSTEPKKIASVNNATRASPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVRDDQEWEITEMRKALSRTGPIDAYKPKNISLEEELRALQEKVDINNYEYKRIPKPTDQTS
Homology
BLAST of Bhi07G000729 vs. TAIR 10
Match: AT4G14145.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 176.8 bits (447), Expect = 1.2e-44
Identity = 88/133 (66.17%), Postives = 104/133 (78.20%), Query Frame = 0

Query: 7   MTSTEAG-IGQSTEPKKIASVNNAT-RASPSMFRRWGRRHPFIRYGLPMISLTVLGAVGL 66
           MT+ E G   Q + P    +    T + S + F+RWGRRHPF+RYGLPMISLTV GA+GL
Sbjct: 1   MTTIETGQKTQKSSPSGSGTTPTGTLKQSSASFKRWGRRHPFVRYGLPMISLTVFGALGL 60

Query: 67  GHLLQGSKDIAKVRDDQEWEITEMRKALSRTGPIDAYKPKNISLEEELRALQEKVDINNY 126
           G LLQGSKDIAKV+DDQEWEI E RKALSRTGP+DAYKPKN S+E+EL+A+QEKVDIN Y
Sbjct: 61  GQLLQGSKDIAKVKDDQEWEIIETRKALSRTGPVDAYKPKNTSIEDELKAMQEKVDINTY 120

Query: 127 EYKRIPKPTDQTS 138
           EYK+IPK  +  S
Sbjct: 121 EYKKIPKLNESKS 133

BLAST of Bhi07G000729 vs. ExPASy TrEMBL
Match: A0A6J1HX89 (uncharacterized protein LOC111468648 OS=Cucurbita maxima OX=3661 GN=LOC111468648 PE=3 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 9.9e-63
Identity = 122/131 (93.13%), Postives = 126/131 (96.18%), Query Frame = 0

Query: 7   MTSTEAGIGQSTEPKKIASVNNATRASPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGH 66
           MTSTEAG+GQSTE KK  S NNA R+SPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGH
Sbjct: 1   MTSTEAGVGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGH 60

Query: 67  LLQGSKDIAKVRDDQEWEITEMRKALSRTGPIDAYKPKNISLEEELRALQEKVDINNYEY 126
           LLQGSKDIAKV+DDQEWEITEMRKALSRTGPIDAYKPKNISLEEELRALQEKVDINNYEY
Sbjct: 61  LLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNISLEEELRALQEKVDINNYEY 120

Query: 127 KRIPKPTDQTS 138
           KRIPKPTD+TS
Sbjct: 121 KRIPKPTDRTS 131

BLAST of Bhi07G000729 vs. ExPASy TrEMBL
Match: A0A6J1GWL5 (uncharacterized protein LOC111458129 OS=Cucurbita moschata OX=3662 GN=LOC111458129 PE=3 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.7e-62
Identity = 122/131 (93.13%), Postives = 126/131 (96.18%), Query Frame = 0

Query: 7   MTSTEAGIGQSTEPKKIASVNNATRASPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGH 66
           MTSTEAG+GQSTE KK  S NNA R+SPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGH
Sbjct: 1   MTSTEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGH 60

Query: 67  LLQGSKDIAKVRDDQEWEITEMRKALSRTGPIDAYKPKNISLEEELRALQEKVDINNYEY 126
           LLQGSKDIAKV+DDQEWEITEMRKALSRTGPIDAYKPKNISLEEELRALQEKVDINNYEY
Sbjct: 61  LLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNISLEEELRALQEKVDINNYEY 120

Query: 127 KRIPKPTDQTS 138
           KRIPKPTD+TS
Sbjct: 121 KRIPKPTDRTS 131

BLAST of Bhi07G000729 vs. ExPASy TrEMBL
Match: A0A1S4DWC3 (uncharacterized protein LOC103489460 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489460 PE=3 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 2.2e-62
Identity = 120/131 (91.60%), Postives = 129/131 (98.47%), Query Frame = 0

Query: 7   MTSTEAGIGQSTEPKKIASVNNATRASPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGH 66
           MTSTEAG+G+STEPKKI+S +NA RASPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGH
Sbjct: 1   MTSTEAGMGESTEPKKISSASNAARASPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGH 60

Query: 67  LLQGSKDIAKVRDDQEWEITEMRKALSRTGPIDAYKPKNISLEEELRALQEKVDINNYEY 126
           LLQGSKDIAKV+DDQEWEITEMR+ALSRTGPIDAYKPKNISLEEELRALQE+VDINNYEY
Sbjct: 61  LLQGSKDIAKVKDDQEWEITEMREALSRTGPIDAYKPKNISLEEELRALQEQVDINNYEY 120

Query: 127 KRIPKPTDQTS 138
           KRIP+PTD+TS
Sbjct: 121 KRIPRPTDRTS 131

BLAST of Bhi07G000729 vs. ExPASy TrEMBL
Match: A0A6J1CBH5 (uncharacterized protein LOC111010064 OS=Momordica charantia OX=3673 GN=LOC111010064 PE=3 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 2.1e-57
Identity = 113/131 (86.26%), Postives = 121/131 (92.37%), Query Frame = 0

Query: 7   MTSTEAGIGQSTEPKKIASVNNATRASPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGH 66
           MTS E G+ QS EP KI+S  N  RASPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGH
Sbjct: 1   MTSPEVGMVQSMEPNKISSATNTARASPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGH 60

Query: 67  LLQGSKDIAKVRDDQEWEITEMRKALSRTGPIDAYKPKNISLEEELRALQEKVDINNYEY 126
           LLQGSKDIAKV+DDQEWEITEMRKALSRTGP+DAYKPKNISLEEELRALQEKV+IN+YEY
Sbjct: 61  LLQGSKDIAKVKDDQEWEITEMRKALSRTGPVDAYKPKNISLEEELRALQEKVNINDYEY 120

Query: 127 KRIPKPTDQTS 138
           KRIPKP+ +TS
Sbjct: 121 KRIPKPSGRTS 131

BLAST of Bhi07G000729 vs. ExPASy TrEMBL
Match: A0A5A7SXX4 (Cytochrome c oxidase assembly protein cox16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002640 PE=3 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 1.2e-52
Identity = 104/128 (81.25%), Postives = 120/128 (93.75%), Query Frame = 0

Query: 10  TEAGIGQSTEPKKIASVNNATRASPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQ 69
           TEAG+G+STEPKKI+S +NA RASPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQ
Sbjct: 162 TEAGMGESTEPKKISSASNAARASPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQ 221

Query: 70  GSKDIAKVRDDQEWEITEMRKALSRTGPIDAYKPKNISLEEELRALQEKVDINNYEYKRI 129
           GSKDIAKV+DDQEWEITEMR+ALSRTGPIDA+   ++ + ++ +ALQE+VDINNYEYKRI
Sbjct: 222 GSKDIAKVKDDQEWEITEMREALSRTGPIDAFAINSL-IVDDFQALQEQVDINNYEYKRI 281

Query: 130 PKPTDQTS 138
           P+PTD+TS
Sbjct: 282 PRPTDRTS 288

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT4G14145.11.2e-4466.17unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1HX899.9e-6393.13uncharacterized protein LOC111468648 OS=Cucurbita maxima OX=3661 GN=LOC111468648... [more]
A0A6J1GWL51.7e-6293.13uncharacterized protein LOC111458129 OS=Cucurbita moschata OX=3662 GN=LOC1114581... [more]
A0A1S4DWC32.2e-6291.60uncharacterized protein LOC103489460 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A6J1CBH52.1e-5786.26uncharacterized protein LOC111010064 OS=Momordica charantia OX=3673 GN=LOC111010... [more]
A0A5A7SXX41.2e-5281.25Cytochrome c oxidase assembly protein cox16 OS=Cucumis melo var. makuwa OX=11946... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020164Cytochrome c oxidase assembly protein COX16PFAMPF14138COX16coord: 47..133
e-value: 6.4E-20
score: 71.4

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi07M000729Bhi07M000729mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0031966 mitochondrial membrane