Bhi07G000716 (gene) Wax gourd (B227) v1

Overview


Name	Bhi07G000716
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	SKP1-like protein
Location	chr7: 28801517 .. 28802412 (-)
RNA-Seq Expression	Bhi07G000716
Synteny	Bhi07G000716

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGAATGTGAGTCGGGAATCGATTTTAAAAGTTCCCCCAACAAAAAAAAACCCTAATCCCTATAAATACAGCCATTCATCAAATCAATTGCATTCATCTTAAGAAATTCCCAAATTTCTCTCTAATCAATCACTATGAGGACTGTTAACCTAAGATCATCGGAGAACGAGGTTTTCAAGGTGAGGGAGGAGATCGCAAAACAATCCGTGGTGGTTCGAAACTTTCTTGAAGAGGATGAATCGAATAGCGATGAAGTTACGATTCCGCTGCCGAATATTAGTGGAAGAATTCTGGCAATGGTGATTGAGTGGATTGTGAAGCACGTCGAAGAAAAGTTAACAGAGACAGCACTTAAAGATTGGCAAATTAAGTTCGTGGGTGATCTGGATTTGGATTCGTTGTTTGAGCTTATAATGGCTGCTAATTACCTGGAAGTCACCGATTTATTCCATCAAACTTGCCAAAGCGTGGCTGATAAGATTGCCGGAAAGAGTCCGGAGGAGATCCGAAAGATCTTTAACATTACGAATGATTTTACGCCTGAAGAAGAGGCTGAGATTCGACGCCAGAATGCTTGGGTCTTCGAATCCGGTACAGGTAGCACCAGCGGCAGTAAATAGATTTCTGATTTCGCTAGTTATTGCTGCATGTTTTTGGGCAACGAAGATGGTGTCGATAGGATATATTAAAGCTAGTATAGATTTATGGTCCACTGTTTTAATCCATTTGTGGTACAGTCTGCCAGTTTAGTTTTTAAATGTTATTTGTTATTGTTCTTGTTAGAAACTTTACTGCTGAATGGTATGGAATTTTTTTATGTTGAAATCTTTCTCTCTCTTTTTTACGAAACTGTTCTTAGTTTTGATGGTTTTTTGGATGATTAAATAGAATGTGAG

mRNA sequence

AGGAATGTGAGTCGGGAATCGATTTTAAAAGTTCCCCCAACAAAAAAAAACCCTAATCCCTATAAATACAGCCATTCATCAAATCAATTGCATTCATCTTAAGAAATTCCCAAATTTCTCTCTAATCAATCACTATGAGGACTGTTAACCTAAGATCATCGGAGAACGAGGTTTTCAAGGTGAGGGAGGAGATCGCAAAACAATCCGTGGTGGTTCGAAACTTTCTTGAAGAGGATGAATCGAATAGCGATGAAGTTACGATTCCGCTGCCGAATATTAGTGGAAGAATTCTGGCAATGGTGATTGAGTGGATTGTGAAGCACGTCGAAGAAAAGTTAACAGAGACAGCACTTAAAGATTGGCAAATTAAGTTCGTGGGTGATCTGGATTTGGATTCGTTGTTTGAGCTTATAATGGCTGCTAATTACCTGGAAGTCACCGATTTATTCCATCAAACTTGCCAAAGCGTGGCTGATAAGATTGCCGGAAAGAGTCCGGAGGAGATCCGAAAGATCTTTAACATTACGAATGATTTTACGCCTGAAGAAGAGGCTGAGATTCGACGCCAGAATGCTTGGGTCTTCGAATCCGGTACAGGTAGCACCAGCGGCAGTAAATAGATTTCTGATTTCGCTAGTTATTGCTGCATGTTTTTGGGCAACGAAGATGGTGTCGATAGGATATATTAAAGCTAGTATAGATTTATGGTCCACTGTTTTAATCCATTTGTGGTACAGTCTGCCAGTTTAGTTTTTAAATGTTATTTGTTATTGTTCTTGTTAGAAACTTTACTGCTGAATGGTATGGAATTTTTTTATGTTGAAATCTTTCTCTCTCTTTTTTACGAAACTGTTCTTAGTTTTGATGGTTTTTTGGATGATTAAATAGAATGTGAG

Coding sequence (CDS)

ATGAGGACTGTTAACCTAAGATCATCGGAGAACGAGGTTTTCAAGGTGAGGGAGGAGATCGCAAAACAATCCGTGGTGGTTCGAAACTTTCTTGAAGAGGATGAATCGAATAGCGATGAAGTTACGATTCCGCTGCCGAATATTAGTGGAAGAATTCTGGCAATGGTGATTGAGTGGATTGTGAAGCACGTCGAAGAAAAGTTAACAGAGACAGCACTTAAAGATTGGCAAATTAAGTTCGTGGGTGATCTGGATTTGGATTCGTTGTTTGAGCTTATAATGGCTGCTAATTACCTGGAAGTCACCGATTTATTCCATCAAACTTGCCAAAGCGTGGCTGATAAGATTGCCGGAAAGAGTCCGGAGGAGATCCGAAAGATCTTTAACATTACGAATGATTTTACGCCTGAAGAAGAGGCTGAGATTCGACGCCAGAATGCTTGGGTCTTCGAATCCGGTACAGGTAGCACCAGCGGCAGTAAATAG

Protein sequence

MRTVNLRSSENEVFKVREEIAKQSVVVRNFLEEDESNSDEVTIPLPNISGRILAMVIEWIVKHVEEKLTETALKDWQIKFVGDLDLDSLFELIMAANYLEVTDLFHQTCQSVADKIAGKSPEEIRKIFNITNDFTPEEEAEIRRQNAWVFESGTGSTSGSK

Homology

[Close]

BLAST of Bhi07G000716 vs. TAIR 10
Match: AT5G42190.1 (E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein )

HSP 1 Score: 137.1 bits (344), Expect = 1.2e-32
Identity = 76/172 (44.19%), Postives = 109/172 (63.37%), Query Frame = 0


Query: 1   MRTVNLRSSENEVFKVREEIAKQSVVVRNFLEEDESNSDEVTIPLPNISGRILAMVIEWI 60
           +R + L+SS+ E F++ E +A +S  +++ +E+D +++    IPLPN++ +IL+ VIE+ 
Sbjct: 4   VRKITLKSSDGENFEIDEAVALESQTIKHMIEDDCTDNG---IPLPNVTSKILSKVIEYC 63

Query: 61  VKHVE--EKLTETA-------------------LKDWQIKFVGDLDLDSLFELIMAANYL 120
            +HVE  EK   TA                   LK W  +F+  +D  +LF+LI+AANYL
Sbjct: 64  KRHVEAAEKSETTADAAAATTTTTVASGSSDEDLKTWDSEFI-KVDQGTLFDLILAANYL 123

Query: 121 EVTDLFHQTCQSVADKIAGKSPEEIRKIFNITNDFTPEEEAEIRRQNAWVFE 152
            +  L   TCQ+VAD I GK+PEEIRK FNI NDFTPEEE E+RR+N W FE
Sbjct: 124 NIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171

[Close]

BLAST of Bhi07G000716 vs. TAIR 10
Match: AT1G75950.1 (S phase kinase-associated protein 1 )

HSP 1 Score: 133.7 bits (335), Expect = 1.4e-31
Identity = 72/161 (44.72%), Postives = 103/161 (63.98%), Query Frame = 0


Query: 2   RTVNLRSSENEVFKVREEIAKQSVVVRNFLEEDESNSDEVTIPLPNISGRILAMVIEWIV 61
           + + L+SS+ E F+V E +A +S  + + +E+D  ++    +PLPN++ +ILA VIE+  
Sbjct: 4   KKIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNG---VPLPNVTSKILAKVIEYCK 63

Query: 62  KHVEEKLTETA-----------LKDWQIKFVGDLDLDSLFELIMAANYLEVTDLFHQTCQ 121
           +HVE   ++             LK W   F+  +D  +LFELI+AANYL + +L   TCQ
Sbjct: 64  RHVEAAASKAEAVEGAATSDDDLKAWDADFM-KIDQATLFELILAANYLNIKNLLDLTCQ 123

Query: 122 SVADKIAGKSPEEIRKIFNITNDFTPEEEAEIRRQNAWVFE 152
           +VAD I GK+PEEIR  FNI NDFTPEEE E+RR+N W FE
Sbjct: 124 TVADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160

[Close]

BLAST of Bhi07G000716 vs. TAIR 10
Match: AT2G03170.1 (SKP1-like 14 )

HSP 1 Score: 130.6 bits (327), Expect = 1.2e-30
Identity = 64/146 (43.84%), Postives = 103/146 (70.55%), Query Frame = 0


Query: 6   LRSSENEVFKVREEIAKQSVVVRNFLEEDESNSDEVTIPLPNISGRILAMVIEWIVKHVE 65
           L SS+ E F+V E +A++  +V + +E+D   ++   +PL N++G+IL++V+E+  KHV 
Sbjct: 8   LSSSDGESFEVEEAVARKLKIVEHMIEDDCVVTE---VPLQNVTGKILSIVVEYCKKHVV 67

Query: 66  EKLTETALKDWQIKFVGDLDLDSLFELIMAANYLEVTDLFHQTCQSVADKIAGKSPEEIR 125
           ++ ++   K W  +F+   D  ++F+L++AANYL +  L   + Q+VAD+I  K+PEEIR
Sbjct: 68  DEESD-EFKTWDEEFMKKFDQPTVFQLLLAANYLNIKGLLDLSAQTVADRIKDKTPEEIR 127

Query: 126 KIFNITNDFTPEEEAEIRRQNAWVFE 152
           +IFNI NDFTPEEEA +R++NAW FE
Sbjct: 128 EIFNIENDFTPEEEAAVRKENAWAFE 149

[Close]

BLAST of Bhi07G000716 vs. TAIR 10
Match: AT4G34470.1 (SKP1-like 12 )

HSP 1 Score: 129.8 bits (325), Expect = 2.0e-30
Identity = 72/153 (47.06%), Postives = 99/153 (64.71%), Query Frame = 0


Query: 2   RTVNLRSSENEVFKVREEIAKQSVVVRNFLEEDESNSDEVTIPLPNISGRILAMVIEWIV 61
           + + L SS+ + F+V E +A QS  + + +E+D        IPL N+  +IL  VIE+  
Sbjct: 4   KMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADG---IPLANVESKILVKVIEYCK 63

Query: 62  K-HVEE--KLTETALKDWQIKFVGDLDLDSLFELIMAANYLEVTDLFHQTCQSVADKIAG 121
           K HV+E   ++E  L  W  KF+ DL+  ++FELI+AANYL +  LF  TCQ+VAD I G
Sbjct: 64  KYHVDEANPISEEDLNKWDEKFM-DLEQSTIFELILAANYLNIKSLFDLTCQTVADMIKG 123

Query: 122 KSPEEIRKIFNITNDFTPEEEAEIRRQNAWVFE 152
           K+PEEIR  FNI NDFTPEEE  +R++N W FE
Sbjct: 124 KTPEEIRSTFNIENDFTPEEEEAVRKENQWAFE 152

[Close]

BLAST of Bhi07G000716 vs. TAIR 10
Match: AT2G03190.1 (SKP1-like 16 )

HSP 1 Score: 129.4 bits (324), Expect = 2.6e-30
Identity = 68/163 (41.72%), Postives = 104/163 (63.80%), Query Frame = 0


Query: 6   LRSSENEVFKVREEIAKQSVVVRNFLEEDESNSDEVTIPLPNISGRILAMVIEWIVKHV- 65
           L SS++E F+V E +A++  V+ + +++D ++     IPL N++G ILA+VIE+  KHV 
Sbjct: 8   LTSSDDESFEVEEAVARKLKVIAHMIDDDCADK---AIPLENVTGNILALVIEYCKKHVL 67

Query: 66  -------------EEKLTETA---LKDWQIKFVGDLDLDSLFELIMAANYLEVTDLFHQT 125
                         E + E A   L+ W  +F+ + D++++ +LI+A NYL V DL   T
Sbjct: 68  DDVDDSDDSTEATSENVNEEAKNELRTWDAEFMKEFDMETVMKLILAVNYLNVQDLLGLT 127

Query: 126 CQSVADKIAGKSPEEIRKIFNITNDFTPEEEAEIRRQNAWVFE 152
           CQ+VAD +   SPEE+R++FNI ND+TPEEE  IR++NAW FE
Sbjct: 128 CQTVADHMKDMSPEEVRELFNIENDYTPEEEDAIRKENAWAFE 167

[Close]

BLAST of Bhi07G000716 vs. ExPASy Swiss-Prot
Match: Q651E8 (SKP1-like protein 20 OS=Oryza sativa subsp. japonica OX=39947 GN=SKP20 PE=1 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.0e-31
Identity = 77/169 (45.56%), Postives = 102/169 (60.36%), Query Frame = 0


Query: 4   VNLRSSENEVFKVREEIAKQSVVVRNFLEEDESNSDEVTIPLPNISGRILAMVIEWIVKH 63
           + LRS E +VF+V E +A +S  +R+ +E+      +  IPLPN+S +IL+ VIE+  KH
Sbjct: 11  ITLRSCEGQVFEVAEAVAMESQTIRHMIED---KCADTGIPLPNVSAKILSKVIEYCSKH 70

Query: 64  VE---------------------EKLTETALKDWQIKFVGDLDLDSLFELIMAANYLEVT 123
           VE                      K  E  LK +  +FV  +D  +LF+LI+AANYL + 
Sbjct: 71  VEARGGAAAAADGDAPAPAAVEANKAVEDELKTFDAEFV-KVDQSTLFDLILAANYLNIK 130

Query: 124 DLFHQTCQSVADKIAGKSPEEIRKIFNITNDFTPEEEAEIRRQNAWVFE 152
            L   TCQ+VAD I GK+PEEIRK FNI NDFTPEEE E+RR+N W FE
Sbjct: 131 GLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 175

[Close]

BLAST of Bhi07G000716 vs. ExPASy Swiss-Prot
Match: Q9FHW7 (SKP1-like protein 1B OS=Arabidopsis thaliana OX=3702 GN=SKP1B PE=1 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.7e-31
Identity = 76/172 (44.19%), Postives = 109/172 (63.37%), Query Frame = 0


Query: 1   MRTVNLRSSENEVFKVREEIAKQSVVVRNFLEEDESNSDEVTIPLPNISGRILAMVIEWI 60
           +R + L+SS+ E F++ E +A +S  +++ +E+D +++    IPLPN++ +IL+ VIE+ 
Sbjct: 4   VRKITLKSSDGENFEIDEAVALESQTIKHMIEDDCTDNG---IPLPNVTSKILSKVIEYC 63

Query: 61  VKHVE--EKLTETA-------------------LKDWQIKFVGDLDLDSLFELIMAANYL 120
            +HVE  EK   TA                   LK W  +F+  +D  +LF+LI+AANYL
Sbjct: 64  KRHVEAAEKSETTADAAAATTTTTVASGSSDEDLKTWDSEFI-KVDQGTLFDLILAANYL 123

Query: 121 EVTDLFHQTCQSVADKIAGKSPEEIRKIFNITNDFTPEEEAEIRRQNAWVFE 152
            +  L   TCQ+VAD I GK+PEEIRK FNI NDFTPEEE E+RR+N W FE
Sbjct: 124 NIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171

[Close]

BLAST of Bhi07G000716 vs. ExPASy Swiss-Prot
Match: Q39255 (SKP1-like protein 1A OS=Arabidopsis thaliana OX=3702 GN=SKP1A PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.9e-30
Identity = 72/161 (44.72%), Postives = 103/161 (63.98%), Query Frame = 0


Query: 2   RTVNLRSSENEVFKVREEIAKQSVVVRNFLEEDESNSDEVTIPLPNISGRILAMVIEWIV 61
           + + L+SS+ E F+V E +A +S  + + +E+D  ++    +PLPN++ +ILA VIE+  
Sbjct: 4   KKIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNG---VPLPNVTSKILAKVIEYCK 63

Query: 62  KHVEEKLTETA-----------LKDWQIKFVGDLDLDSLFELIMAANYLEVTDLFHQTCQ 121
           +HVE   ++             LK W   F+  +D  +LFELI+AANYL + +L   TCQ
Sbjct: 64  RHVEAAASKAEAVEGAATSDDDLKAWDADFM-KIDQATLFELILAANYLNIKNLLDLTCQ 123

Query: 122 SVADKIAGKSPEEIRKIFNITNDFTPEEEAEIRRQNAWVFE 152
           +VAD I GK+PEEIR  FNI NDFTPEEE E+RR+N W FE
Sbjct: 124 TVADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160

[Close]

BLAST of Bhi07G000716 vs. ExPASy Swiss-Prot
Match: Q9WTX5 (S-phase kinase-associated protein 1 OS=Mus musculus OX=10090 GN=Skp1 PE=1 SV=3)

HSP 1 Score: 132.1 bits (331), Expect = 5.6e-30
Identity = 73/164 (44.51%), Postives = 105/164 (64.02%), Query Frame = 0


Query: 1   MRTVNLRSSENEVFKVREEIAKQSVVVRNFLEE--DESNSDEVTIPLPNISGRILAMVIE 60
           M T+ L+SS+ E+F+V  EIAKQSV ++  LE+   +   D+  +PLPN++  IL  VI+
Sbjct: 1   MPTIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQ 60

Query: 61  WIVKHVE-----------EKLTETALKDWQIKFVGDLDLDSLFELIMAANYLEVTDLFHQ 120
           W   H +           EK T+  +  W  +F+  +D  +LFELI+AANYL++  L   
Sbjct: 61  WCTHHKDDPPPPEDDENKEKRTDD-IPVWDQEFL-KVDQGTLFELILAANYLDIKGLLDV 120

Query: 121 TCQSVADKIAGKSPEEIRKIFNITNDFTPEEEAEIRRQNAWVFE 152
           TC++VA+ I GK+PEEIRK FNI NDFT EEEA++R++N W  E
Sbjct: 121 TCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162

[Close]

BLAST of Bhi07G000716 vs. ExPASy Swiss-Prot
Match: Q6PEC4 (S-phase kinase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Skp1 PE=1 SV=3)

HSP 1 Score: 132.1 bits (331), Expect = 5.6e-30
Identity = 73/164 (44.51%), Postives = 105/164 (64.02%), Query Frame = 0


Query: 1   MRTVNLRSSENEVFKVREEIAKQSVVVRNFLEE--DESNSDEVTIPLPNISGRILAMVIE 60
           M T+ L+SS+ E+F+V  EIAKQSV ++  LE+   +   D+  +PLPN++  IL  VI+
Sbjct: 1   MPTIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQ 60

Query: 61  WIVKHVE-----------EKLTETALKDWQIKFVGDLDLDSLFELIMAANYLEVTDLFHQ 120
           W   H +           EK T+  +  W  +F+  +D  +LFELI+AANYL++  L   
Sbjct: 61  WCTHHKDDPPPPEDDENKEKRTDD-IPVWDQEFL-KVDQGTLFELILAANYLDIKGLLDV 120

Query: 121 TCQSVADKIAGKSPEEIRKIFNITNDFTPEEEAEIRRQNAWVFE 152
           TC++VA+ I GK+PEEIRK FNI NDFT EEEA++R++N W  E
Sbjct: 121 TCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162

[Close]

BLAST of Bhi07G000716 vs. ExPASy TrEMBL
Match: A0A1S3BGP6 (SKP1-like protein OS=Cucumis melo OX=3656 GN=LOC103489446 PE=3 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 4.1e-68
Identity = 136/162 (83.95%), Postives = 145/162 (89.51%), Query Frame = 0


Query: 1   MRTVNLRSSENEVFKVREEIAKQSVVVRNFLEEDESNSDEVTIPLPNISGRILAMVIEWI 60
           MRTVNLRSSENE+FKV EE+AKQSVVVRNFLEED SN DE+TIPLPNISG++L MVIEWI
Sbjct: 1   MRTVNLRSSENEIFKVSEEVAKQSVVVRNFLEEDNSNGDEITIPLPNISGKLLGMVIEWI 60

Query: 61  VKHVEEKLTETALKDWQIKFVGDLDLDSLFELIMAANYLEVTDLFHQTCQSVADKIAGKS 120
             HVEEKL E  L  W+ KF+ DLDLD LFELIMAANYLEVTDLFH TCQ VADKI+GKS
Sbjct: 61  AMHVEEKLAEEDLHAWKTKFMEDLDLDLLFELIMAANYLEVTDLFHATCQCVADKISGKS 120

Query: 121 PEEIRKIFNITNDFTPEEEAEIRRQNAWVFE-SGTGSTSGSK 162
           PEEIRKIFNITNDFTPEEEAEIRRQNAWVFE SG+GSTSGSK
Sbjct: 121 PEEIRKIFNITNDFTPEEEAEIRRQNAWVFEPSGSGSTSGSK 162

[Close]

BLAST of Bhi07G000716 vs. ExPASy TrEMBL
Match: A0A0A0KRJ8 (SKP1-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G622630 PE=3 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 5.4e-68
Identity = 137/164 (83.54%), Postives = 147/164 (89.63%), Query Frame = 0


Query: 1   MRTVNLRSSENEVFKVREEIAKQSVVVRNFLEEDESNSDEVTIPLPNISGRILAMVIEWI 60
           MR VNLRSSENE+FKV EE+AKQSVVVR FLEED+SN+DE+TIPLPNISGR+L MVIEWI
Sbjct: 1   MRIVNLRSSENEIFKVSEEVAKQSVVVRIFLEEDDSNNDEITIPLPNISGRLLGMVIEWI 60

Query: 61  VKHVEEKLTETALKDWQIKFVGDLDLDSLFELIMAANYLEVTDLFHQTCQSVADKIAGKS 120
           V HVEEKL E AL  W+ KF+ DLDLD LFELIMAANYLEVTDLFH TCQ VADKI+GKS
Sbjct: 61  VMHVEEKLAEEALHAWKTKFLEDLDLDLLFELIMAANYLEVTDLFHATCQCVADKISGKS 120

Query: 121 PEEIRKIFNITNDFTPEEEAEIRRQNAWVFE---SGTGSTSGSK 162
           PEEIRKIFNITNDFTPEEEAEIRRQNAWVFE   SG+GSTSGSK
Sbjct: 121 PEEIRKIFNITNDFTPEEEAEIRRQNAWVFEPSGSGSGSTSGSK 164

[Close]

BLAST of Bhi07G000716 vs. ExPASy TrEMBL
Match: A0A5A7SU15 (SKP1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G007240 PE=3 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 3.5e-67
Identity = 134/161 (83.23%), Postives = 144/161 (89.44%), Query Frame = 0


Query: 1   MRTVNLRSSENEVFKVREEIAKQSVVVRNFLEEDESNSDEVTIPLPNISGRILAMVIEWI 60
           MRTVNLRSSENE+FKV EE+AKQSVVVRNFLEED SN DE+TIPLPNISG++L MVIEWI
Sbjct: 1   MRTVNLRSSENEIFKVSEEVAKQSVVVRNFLEEDNSNGDEITIPLPNISGKLLGMVIEWI 60

Query: 61  VKHVEEKLTETALKDWQIKFVGDLDLDSLFELIMAANYLEVTDLFHQTCQSVADKIAGKS 120
             HVEEKL E  L  W+ KF+ DLDLD LFELIMAANYLEVTDLFH TCQ VADKI+GKS
Sbjct: 61  AMHVEEKLAEEDLHAWKTKFMEDLDLDLLFELIMAANYLEVTDLFHATCQCVADKISGKS 120

Query: 121 PEEIRKIFNITNDFTPEEEAEIRRQNAWVFE-SGTGSTSGS 161
           PEEIRKIFNITNDFTPEEEAEIRRQNAWVFE SG+GSTSG+
Sbjct: 121 PEEIRKIFNITNDFTPEEEAEIRRQNAWVFEPSGSGSTSGT 161

[Close]

BLAST of Bhi07G000716 vs. ExPASy TrEMBL
Match: A0A5D3CCN6 (SKP1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002490 PE=3 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 3.5e-67
Identity = 134/161 (83.23%), Postives = 144/161 (89.44%), Query Frame = 0


Query: 1   MRTVNLRSSENEVFKVREEIAKQSVVVRNFLEEDESNSDEVTIPLPNISGRILAMVIEWI 60
           MRTVNLRSSENE+FKV EE+AKQSVVVRNFLEED SN DE+TIPLPNISG++L MVIEWI
Sbjct: 1   MRTVNLRSSENEIFKVSEEVAKQSVVVRNFLEEDNSNGDEITIPLPNISGKLLGMVIEWI 60

Query: 61  VKHVEEKLTETALKDWQIKFVGDLDLDSLFELIMAANYLEVTDLFHQTCQSVADKIAGKS 120
             HVEEKL E  L  W+ KF+ DLDLD LFELIMAANYLEVTDLFH TCQ VADKI+GKS
Sbjct: 61  AMHVEEKLAEEDLHAWKTKFMEDLDLDLLFELIMAANYLEVTDLFHATCQCVADKISGKS 120

Query: 121 PEEIRKIFNITNDFTPEEEAEIRRQNAWVFE-SGTGSTSGS 161
           PEEIRKIFNITNDFTPEEEAEIRRQNAWVFE SG+GSTSG+
Sbjct: 121 PEEIRKIFNITNDFTPEEEAEIRRQNAWVFEPSGSGSTSGT 161

[Close]

BLAST of Bhi07G000716 vs. ExPASy TrEMBL
Match: A0A6J1JGP3 (SKP1-like protein OS=Cucurbita maxima OX=3661 GN=LOC111486777 PE=3 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 1.0e-50
Identity = 99/154 (64.29%), Postives = 127/154 (82.47%), Query Frame = 0


Query: 1   MRTVNLRSSENEVFKVREEIAKQSVVVRNFLEEDESNSDEVTIPLPNISGRILAMVIEWI 60
           MRT  L+SS+N++FKV EEIA QS V++NFLE+  S+SDE+ IPLPN+ GRIL M+IEW+
Sbjct: 1   MRTFQLKSSDNKIFKVSEEIAIQSAVIKNFLEDFGSDSDEIVIPLPNVRGRILEMMIEWM 60

Query: 61  VKHVEEKLTETALKDWQIKFVGDLDLDSLFELIMAANYLEVTDLFHQTCQSVADKIAGKS 120
           VKHV+E+LT+  ++DW+ KF+ DL+++   EL+MAANYLEV  L H+TCQS+AD I+GKS
Sbjct: 61  VKHVDEELTKEEVEDWENKFMNDLNMEVTTELVMAANYLEVIGLLHRTCQSIADHISGKS 120

Query: 121 PEEIRKIFNITNDFTPEEEAEIRRQNAWVFESGT 155
           PEEIR+I NIT+DFTPEEEAEIRRQN WV    T
Sbjct: 121 PEEIRRILNITSDFTPEEEAEIRRQNGWVLNPST 154

The following BLAST results are available for this feature:

BLAST of Bhi07G000716 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G42190.1	1.2e-32	44.19	E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein	[more]
AT1G75950.1	1.4e-31	44.72	S phase kinase-associated protein 1	[more]
AT2G03170.1	1.2e-30	43.84	SKP1-like 14	[more]
AT4G34470.1	2.0e-30	47.06	SKP1-like 12	[more]
AT2G03190.1	2.6e-30	41.72	SKP1-like 16	[more]

BLAST of Bhi07G000716 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q651E8	1.0e-31	45.56	SKP1-like protein 20 OS=Oryza sativa subsp. japonica OX=39947 GN=SKP20 PE=1 SV=1	[more]
Q9FHW7	1.7e-31	44.19	SKP1-like protein 1B OS=Arabidopsis thaliana OX=3702 GN=SKP1B PE=1 SV=1	[more]
Q39255	1.9e-30	44.72	SKP1-like protein 1A OS=Arabidopsis thaliana OX=3702 GN=SKP1A PE=1 SV=1	[more]
Q9WTX5	5.6e-30	44.51	S-phase kinase-associated protein 1 OS=Mus musculus OX=10090 GN=Skp1 PE=1 SV=3	[more]
Q6PEC4	5.6e-30	44.51	S-phase kinase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Skp1 PE=1 S...	[more]

BLAST of Bhi07G000716 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BGP6	4.1e-68	83.95	SKP1-like protein OS=Cucumis melo OX=3656 GN=LOC103489446 PE=3 SV=1	[more]
A0A0A0KRJ8	5.4e-68	83.54	SKP1-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G622630 PE=3 SV=1	[more]
A0A5A7SU15	3.5e-67	83.23	SKP1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G...	[more]
A0A5D3CCN6	3.5e-67	83.23	SKP1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475...	[more]
A0A6J1JGP3	1.0e-50	64.29	SKP1-like protein OS=Cucurbita maxima OX=3661 GN=LOC111486777 PE=3 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001232	S-phase kinase-associated protein 1-like	SMART	SM00512	skp1_3	coord: 1..101 e-value: 6.0E-24 score: 95.6
IPR011333	SKP1/BTB/POZ domain superfamily	GENE3D	3.30.710.10	Potassium Channel Kv1.1; Chain A	coord: 1..152 e-value: 3.3E-54 score: 185.3
IPR011333	SKP1/BTB/POZ domain superfamily	SUPERFAMILY	54695	POZ domain	coord: 2..67
IPR016073	SKP1 component, POZ domain	PFAM	PF03931	Skp1_POZ	coord: 4..64 e-value: 6.1E-15 score: 55.2
IPR016897	S-phase kinase-associated protein 1	PIRSF	PIRSF028729	SCF_Skp	coord: 1..152 e-value: 4.4E-52 score: 174.1
IPR016897	S-phase kinase-associated protein 1	PANTHER	PTHR11165	SKP1	coord: 2..151
IPR016072	SKP1 component, dimerisation	PFAM	PF01466	Skp1	coord: 104..149 e-value: 2.2E-23 score: 82.0
None	No IPR available	PANTHER	PTHR11165:SF110	SCF UBIQUITIN LIGASE, SKP1 COMPONENT	coord: 2..151
None	No IPR available	CDD	cd18322	BTB_POZ_SKP1	coord: 3..116 e-value: 2.45495E-36 score: 120.004
IPR036296	SKP1-like, dimerisation domain superfamily	SUPERFAMILY	81382	Skp1 dimerisation domain-like	coord: 73..149

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi07M000716	Bhi07M000716	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0031146	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0097602	cullin family protein binding
molecular_function	GO:0016301	kinase activity