Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCAAATTCAAATGCAACTTTGAAATCGGTATAATTTAGGTAAGGCGTTCGCTCCCTCACAGATAGAAACTTGTGCAGGTCTTTCACTGAACTCAAGCTCACATGGGGTTTGATTCGTATGTGTAACTTGTGTTGCGCCCTTCTACCCAGAGCCCTTCTTTATCCTAAATTAATTAACCCCTTTGATTCGTATCTGTAATTTCTTGATTATACTTGATACCCATTACACAGAGCGCTGAAATTTGAAATTTCTGATGTTGGTTTACCATGGAAGCTCAACTGGGTTCGATGCCCTCGTGCCGAAGGTAAGCAAGAAAATTCAAACTTCCTCAATTTCGTTTTAACAATTTCTAACTGTTTAATCAGACAATTTTCCCCTTTCCCTTATAGATAGATTGCATTTACTTTAACAACAAATTGACATTTAGAGCTGCCAGTGTCAAGTGTGTCCACAAGCAAGCTGAGAGGTACTCTTCTTTTCCTATACTTTTTTTGCTTTCTGAGTTTCATTCAACTGCATGATTTTGATTTTAAGGTTGCTTTGATTAAATATAGACGTATTGTTAAGAAGGTTGGGAAGGAGGAACACCATTTATGGAAGAAAAGAGATTCTGCTGGCTCTGGGCAAAAGGCTCTTAATCTTGTTAGAATTGTAAGCTGCATTTTCGTTGATTCCCCCTCCAATATTGAGAGGAAAGAGTGGTAATTTCAGTTAGTTTGAAATTCAAATGCTGTTCTAACATATTGTAGGTTTCCCAATGTCCTAATGAGAAAGAAGCTGTATATGGAGAATTGAATAAGTGGATAGCTTGGGAGACAGAGTTTCCATTGATTGCAGCTGCTAAAGCTTTAAGAATACTGAGGAAGAGAAGTCAATGGAAGTGTGTCATTCAAGTACGAATGAGTTCGGTTTTACTTCTTGTCTTTCTGGCCTTTTGGCGAATTTGTACCTCGTCCATGATGTTGATTCTAAAGTATGCAGTGGTGTCTGTAATGAAATCATCTTTGTCCAGCTCTTACTATATTATCGCTTATTTTTTGGTCAGCTAATCTACTCGTGTGTTAGATTTTTATTGTAATGTTGCATTTATTTGATAAGTTGTGGTTTGTTCAGTTTTTATATTGAAGTTTGATCTTGAACCTAGGTCATTTGGACTTTCTTATGGTTAAATATACGATTGAAGAAACAAGAGATAACACTTTGGTTTTAGTTGATACATCAAGTTTCATAATTCCTGTTTAAGATTTAGCTTTATGGGCAGATAACTGATGGTTGTTGGTTCCTGAATTGTGAATGATGAAACAACAGCGAGTCTGTGTTTTTGAGAAAAATATTTCTCGAACTAGAACGCCAAATTGCTTAAAGCGATGGAAGCCTCGGTGTTGGACTTGCAGGGTACTTACGTTTTGCATGTGGAAAGATTATATCTGATTAACAATGAAAGTTAGAAAGAGAAAAGTTGGTCTTTTCCCTAATGTCAATTTCCCAAAGTCCTTTTATCTGGTAAAGTTTGGGCTTATGAATATTTATGATGGTTTCTGTATGCAATATTCAATAGTTGCCTTTTTCCTTCCACAAGAAAACTGATAACTCAAGACCTTTTCACCTATTGATATCACTTTCATATATTAGAGTATCTTGGCTGGATCGGAGTCAAATTAATAGCTCCTTATAGATTTTCCCGCCTAGTCTTTTTGTTAATCAATGGTTCTTATTACTCAGGTGGCAAAGTGGATGTTAAGCAAGGGTCAAGGAGCCACAATGGGAACATATGACACCCTTTTACTGGCATTTGATATGGACAAGAGGGTGGACGAAGCCGAATCATTATGGAACATGATTTTGCATACACATACACGTTCCATCTCTAAGCGATTGTTTTCTAGGATGATCTCTTTGTACGAACATCATGACTTGCAAGATAAGATTATCGAGGTATTGGGAATGGGATTTCCACATATTGCTTCTTACCTCCGGTTCCTCTCTATTTTTCAATCTTCTCTTTGTACCTTATCAATGATCTCATGCTTCAATTTCTTCTCTTATTACAGATATTTGCAGACATGGAAGAGTTGGGTGTAAAACCAGATGAAGATACCGTTAGAAGAGTCGGCCGTGCCTTTCATAAACTAGGTCAAGAAGAAAACCAGAAAATGGTCTATAAAAGATACGGCTGCCAATGGAAATACATACACTTCAAGGGTGAGAGGGTTAGAGTGAGAAGAGATGGATGGGATGAAGATGATGGATGATTGAAGAGCAGAGATGGCTGAACACTAGCATGAACAAGTTCATAGAATCATAAGGTATCTATCTACTGATTGCCGTTAATTATATGCGCTAAGGCATGCTGAAACCTAGATCTGCAGTCTATTTTTTTTCCACTGGTTTGTTTGAATATTTTAGTACTAACAGAGATAATGCAGACATTGTAAGATATTAATAAGATATGAAAAAAAGTAGTGTATATGTTAACCAAATGACTTTATCTATCATGTTTGCAAGAACCTTGATTCTATCTTAGGCTTGAGGTATGAAAAGAATAGCAGTAGGATTATTTTCATTGGGACAAACAACCCCGTTAGTCGAACCGGATAAGATTTTCATATCTTTTGCTTTTGCCTACTTATGAAAACAGTAGAAAAAGTATACTGAAGGTTGAGTAAATTTCACATCAAGGTTTGGAATCTTCATTCTGAAGCAATCAAGACTAGAAAAGCTTTTGATGAAATCACTGCTAGAATTATGCCAAAAGAAAAGTGGAGTATAGTTAGATAAGATGGATTTGATTTGAACAATCCCAACAATGACATGAACATGAAAATGCAAATTCACAAACAAGGGTAGCAGCAAAAGATAGATTATAATATAATGATAACATGTTGATAATTTATTGATTATATAATGTAGATTTGGATGTTGGTTGAATAATTTGAAAGTAGTATTATAATGAATGTATAGTTTATATATTGATTGCGATCTATTCCATGAAAGTTGAAAGAAAATCCAAGATCCAGATTGAAGTGGATGCCATTCCTGTCAAGTACAGAGGACAGCCCCATTGCTCCAACAAAAAACTATTCATAAAATTGTACGGTCGGCATCCACGCATGGCATGGGCATGACCATGCTCCCTATGTTCTCTTCTTTTCAAAAGATTGTCTATTTTTCTTTAAGCTTATTTGTTTGTGTCTCTCTCTCTATATATATATGTATATATTAATAGGTTCAAATACCATTTTTGCCCATATACTTTATGTTGGTCTAATTTTAGTCTTCAATAGTCTGAAAAATTTAGTCCTTATTGTTCTTATTGTCATTTTTCTCCAAAA
mRNA sequence
CCCAAATTCAAATGCAACTTTGAAATCGGTATAATTTAGGTAAGGCGTTCGCTCCCTCACAGATAGAAACTTGTGCAGGTCTTTCACTGAACTCAAGCTCACATGGGGTTTGATTCGTATGTGTAACTTGTGTTGCGCCCTTCTACCCAGAGCCCTTCTTTATCCTAAATTAATTAACCCCTTTGATTCGTATCTGTAATTTCTTGATTATACTTGATACCCATTACACAGAGCGCTGAAATTTGAAATTTCTGATGTTGGTTTACCATGGAAGCTCAACTGGGTTCGATGCCCTCGTGCCGAAGATAGATTGCATTTACTTTAACAACAAATTGACATTTAGAGCTGCCAGTGTCAAGTGTGTCCACAAGCAAGCTGAGAGACGTATTGTTAAGAAGGTTGGGAAGGAGGAACACCATTTATGGAAGAAAAGAGATTCTGCTGGCTCTGGGCAAAAGGCTCTTAATCTTGTTAGAATTGTTTCCCAATGTCCTAATGAGAAAGAAGCTGTATATGGAGAATTGAATAAGTGGATAGCTTGGGAGACAGAGTTTCCATTGATTGCAGCTGCTAAAGCTTTAAGAATACTGAGGAAGAGAAGTCAATGGAAGTGTGTCATTCAAGTGGCAAAGTGGATGTTAAGCAAGGGTCAAGGAGCCACAATGGGAACATATGACACCCTTTTACTGGCATTTGATATGGACAAGAGGGTGGACGAAGCCGAATCATTATGGAACATGATTTTGCATACACATACACGTTCCATCTCTAAGCGATTGTTTTCTAGGATGATCTCTTTGTACGAACATCATGACTTGCAAGATAAGATTATCGAGATATTTGCAGACATGGAAGAGTTGGGTGTAAAACCAGATGAAGATACCGTTAGAAGAGTCGGCCGTGCCTTTCATAAACTAGGTCAAGAAGAAAACCAGAAAATGGTCTATAAAAGATACGGCTGCCAATGGAAATACATACACTTCAAGGGTGAGAGGGTTAGAGTGAGAAGAGATGGATGGGATGAAGATGATGGATGATTGAAGAGCAGAGATGGCTGAACACTAGCATGAACAAGTTCATAGAATCATAAGTTGAAAGAAAATCCAAGATCCAGATTGAAGTGGATGCCATTCCTGTCAAGTACAGAGGACAGCCCCATTGCTCCAACAAAAAACTATTCATAAAATTGTACGGTCGGCATCCACGCATGGCATGGGCATGACCATGCTCCCTATGTTCTCTTCTTTTCAAAAGATTGTCTATTTTTCTTTAAGCTTATTTGTTTGTGTCTCTCTCTCTATATATATATGTATATATTAATAGGTTCAAATACCATTTTTGCCCATATACTTTATGTTGGTCTAATTTTAGTCTTCAATAGTCTGAAAAATTTAGTCCTTATTGTTCTTATTGTCATTTTTCTCCAAAA
Coding sequence (CDS)
ATGTTGGTTTACCATGGAAGCTCAACTGGGTTCGATGCCCTCGTGCCGAAGATAGATTGCATTTACTTTAACAACAAATTGACATTTAGAGCTGCCAGTGTCAAGTGTGTCCACAAGCAAGCTGAGAGACGTATTGTTAAGAAGGTTGGGAAGGAGGAACACCATTTATGGAAGAAAAGAGATTCTGCTGGCTCTGGGCAAAAGGCTCTTAATCTTGTTAGAATTGTTTCCCAATGTCCTAATGAGAAAGAAGCTGTATATGGAGAATTGAATAAGTGGATAGCTTGGGAGACAGAGTTTCCATTGATTGCAGCTGCTAAAGCTTTAAGAATACTGAGGAAGAGAAGTCAATGGAAGTGTGTCATTCAAGTGGCAAAGTGGATGTTAAGCAAGGGTCAAGGAGCCACAATGGGAACATATGACACCCTTTTACTGGCATTTGATATGGACAAGAGGGTGGACGAAGCCGAATCATTATGGAACATGATTTTGCATACACATACACGTTCCATCTCTAAGCGATTGTTTTCTAGGATGATCTCTTTGTACGAACATCATGACTTGCAAGATAAGATTATCGAGATATTTGCAGACATGGAAGAGTTGGGTGTAAAACCAGATGAAGATACCGTTAGAAGAGTCGGCCGTGCCTTTCATAAACTAGGTCAAGAAGAAAACCAGAAAATGGTCTATAAAAGATACGGCTGCCAATGGAAATACATACACTTCAAGGGTGAGAGGGTTAGAGTGAGAAGAGATGGATGGGATGAAGATGATGGATGA
Protein sequence
MLVYHGSSTGFDALVPKIDCIYFNNKLTFRAASVKCVHKQAERRIVKKVGKEEHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKRSQWKCVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFHKLGQEENQKMVYKRYGCQWKYIHFKGERVRVRRDGWDEDDG
Homology
BLAST of Bhi07G000595 vs. TAIR 10
Match:
AT4G18975.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 337.4 bits (864), Expect = 1.0e-92
Identity = 161/207 (77.78%), Postives = 185/207 (89.37%), Query Frame = 0
Query: 46 VKKVGKEEHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAA 105
+KKVGK+EHHLWKK DSAGSGQKALNLVR++S PNEKEAVYG LNKW+AWE EFP+IAA
Sbjct: 75 IKKVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVEFPIIAA 134
Query: 106 AKALRILRKRSQWKCVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILH 165
AKAL+ILRKRSQW VIQ+AKWMLSKGQGATMGTYD LLLAFDMD+R DEAESLWNMILH
Sbjct: 135 AKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESLWNMILH 194
Query: 166 THTRSISKRLFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFHKLGQEE 225
THTRSI +RLF+RMI+LY HHDL DK+IE+FADMEEL V PDED+ RRV RAF +L QEE
Sbjct: 195 THTRSIPRRLFARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFRELNQEE 254
Query: 226 NQKMVYKRYGCQWKYIHFKGERVRVRR 253
N+K++ +RY ++KYI+F GERVRV+R
Sbjct: 255 NRKLILRRYLSEYKYIYFNGERVRVKR 281
BLAST of Bhi07G000595 vs. TAIR 10
Match:
AT4G18975.2 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 337.4 bits (864), Expect = 1.0e-92
Identity = 161/207 (77.78%), Postives = 185/207 (89.37%), Query Frame = 0
Query: 46 VKKVGKEEHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAA 105
+KKVGK+EHHLWKK DSAGSGQKALNLVR++S PNEKEAVYG LNKW+AWE EFP+IAA
Sbjct: 48 IKKVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVEFPIIAA 107
Query: 106 AKALRILRKRSQWKCVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILH 165
AKAL+ILRKRSQW VIQ+AKWMLSKGQGATMGTYD LLLAFDMD+R DEAESLWNMILH
Sbjct: 108 AKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESLWNMILH 167
Query: 166 THTRSISKRLFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFHKLGQEE 225
THTRSI +RLF+RMI+LY HHDL DK+IE+FADMEEL V PDED+ RRV RAF +L QEE
Sbjct: 168 THTRSIPRRLFARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFRELNQEE 227
Query: 226 NQKMVYKRYGCQWKYIHFKGERVRVRR 253
N+K++ +RY ++KYI+F GERVRV+R
Sbjct: 228 NRKLILRRYLSEYKYIYFNGERVRVKR 254
BLAST of Bhi07G000595 vs. TAIR 10
Match:
AT4G18975.3 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 337.4 bits (864), Expect = 1.0e-92
Identity = 161/207 (77.78%), Postives = 185/207 (89.37%), Query Frame = 0
Query: 46 VKKVGKEEHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAA 105
+KKVGK+EHHLWKK DSAGSGQKALNLVR++S PNEKEAVYG LNKW+AWE EFP+IAA
Sbjct: 75 IKKVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVEFPIIAA 134
Query: 106 AKALRILRKRSQWKCVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILH 165
AKAL+ILRKRSQW VIQ+AKWMLSKGQGATMGTYD LLLAFDMD+R DEAESLWNMILH
Sbjct: 135 AKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESLWNMILH 194
Query: 166 THTRSISKRLFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFHKLGQEE 225
THTRSI +RLF+RMI+LY HHDL DK+IE+FADMEEL V PDED+ RRV RAF +L QEE
Sbjct: 195 THTRSIPRRLFARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFRELNQEE 254
Query: 226 NQKMVYKRYGCQWKYIHFKGERVRVRR 253
N+K++ +RY ++KYI+F GERVRV+R
Sbjct: 255 NRKLILRRYLSEYKYIYFNGERVRVKR 281
BLAST of Bhi07G000595 vs. TAIR 10
Match:
AT4G18975.4 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 337.4 bits (864), Expect = 1.0e-92
Identity = 161/207 (77.78%), Postives = 185/207 (89.37%), Query Frame = 0
Query: 46 VKKVGKEEHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAA 105
+KKVGK+EHHLWKK DSAGSGQKALNLVR++S PNEKEAVYG LNKW+AWE EFP+IAA
Sbjct: 75 IKKVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVEFPIIAA 134
Query: 106 AKALRILRKRSQWKCVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILH 165
AKAL+ILRKRSQW VIQ+AKWMLSKGQGATMGTYD LLLAFDMD+R DEAESLWNMILH
Sbjct: 135 AKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESLWNMILH 194
Query: 166 THTRSISKRLFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFHKLGQEE 225
THTRSI +RLF+RMI+LY HHDL DK+IE+FADMEEL V PDED+ RRV RAF +L QEE
Sbjct: 195 THTRSIPRRLFARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFRELNQEE 254
Query: 226 NQKMVYKRYGCQWKYIHFKGERVRVRR 253
N+K++ +RY ++KYI+F GERVRV+R
Sbjct: 255 NRKLILRRYLSEYKYIYFNGERVRVKR 281
BLAST of Bhi07G000595 vs. TAIR 10
Match:
AT4G21190.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 185.3 bits (469), Expect = 6.4e-47
Identity = 92/197 (46.70%), Postives = 125/197 (63.45%), Query Frame = 0
Query: 56 LWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKR 115
+WK R G+ KA ++ + N KE VYG L+ +IAWE EFPL+ KAL IL
Sbjct: 45 VWKTRKRIGTISKAAKMIACIKGLSNVKEEVYGALDSFIAWELEFPLVIVKKALVILEDE 104
Query: 116 SQWKCVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRL 175
+WK +IQV KWMLSKGQG TMGTY +LL A D R+DEAE LWN + H ++
Sbjct: 105 KEWKKIIQVTKWMLSKGQGRTMGTYFSLLNALAEDNRLDEAEELWNKLFMEHLEGTPRKF 164
Query: 176 FSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFHKLGQEENQKMVYKRY- 235
F++MIS+Y D+ K+ E+FADMEELGVKP+ V VG+ F KL ++ + + K+Y
Sbjct: 165 FNKMISIYYKRDMHQKLFEVFADMEELGVKPNVAIVSMVGKVFVKLEMKDKYEKLMKKYP 224
Query: 236 GCQWKYIHFKGERVRVR 252
QW++ + KG RV+V+
Sbjct: 225 PPQWEFRYIKGRRVKVK 241
BLAST of Bhi07G000595 vs. ExPASy Swiss-Prot
Match:
Q2V3H0 (Pentatricopeptide repeat-containing protein At4g18975, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g18975 PE=2 SV=2)
HSP 1 Score: 337.4 bits (864), Expect = 1.4e-91
Identity = 161/207 (77.78%), Postives = 185/207 (89.37%), Query Frame = 0
Query: 46 VKKVGKEEHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAA 105
+KKVGK+EHHLWKK DSAGSGQKALNLVR++S PNEKEAVYG LNKW+AWE EFP+IAA
Sbjct: 75 IKKVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVEFPIIAA 134
Query: 106 AKALRILRKRSQWKCVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILH 165
AKAL+ILRKRSQW VIQ+AKWMLSKGQGATMGTYD LLLAFDMD+R DEAESLWNMILH
Sbjct: 135 AKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESLWNMILH 194
Query: 166 THTRSISKRLFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFHKLGQEE 225
THTRSI +RLF+RMI+LY HHDL DK+IE+FADMEEL V PDED+ RRV RAF +L QEE
Sbjct: 195 THTRSIPRRLFARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFRELNQEE 254
Query: 226 NQKMVYKRYGCQWKYIHFKGERVRVRR 253
N+K++ +RY ++KYI+F GERVRV+R
Sbjct: 255 NRKLILRRYLSEYKYIYFNGERVRVKR 281
BLAST of Bhi07G000595 vs. ExPASy Swiss-Prot
Match:
Q8LG95 (Pentatricopeptide repeat-containing protein At4g21190 OS=Arabidopsis thaliana OX=3702 GN=EMB1417 PE=2 SV=1)
HSP 1 Score: 185.3 bits (469), Expect = 9.0e-46
Identity = 92/197 (46.70%), Postives = 125/197 (63.45%), Query Frame = 0
Query: 56 LWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKR 115
+WK R G+ KA ++ + N KE VYG L+ +IAWE EFPL+ KAL IL
Sbjct: 45 VWKTRKRIGTISKAAKMIACIKGLSNVKEEVYGALDSFIAWELEFPLVIVKKALVILEDE 104
Query: 116 SQWKCVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRL 175
+WK +IQV KWMLSKGQG TMGTY +LL A D R+DEAE LWN + H ++
Sbjct: 105 KEWKKIIQVTKWMLSKGQGRTMGTYFSLLNALAEDNRLDEAEELWNKLFMEHLEGTPRKF 164
Query: 176 FSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFHKLGQEENQKMVYKRY- 235
F++MIS+Y D+ K+ E+FADMEELGVKP+ V VG+ F KL ++ + + K+Y
Sbjct: 165 FNKMISIYYKRDMHQKLFEVFADMEELGVKPNVAIVSMVGKVFVKLEMKDKYEKLMKKYP 224
Query: 236 GCQWKYIHFKGERVRVR 252
QW++ + KG RV+V+
Sbjct: 225 PPQWEFRYIKGRRVKVK 241
BLAST of Bhi07G000595 vs. ExPASy TrEMBL
Match:
A0A5A7UD21 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold174G00890 PE=4 SV=1)
HSP 1 Score: 489.6 bits (1259), Expect = 8.2e-135
Identity = 242/269 (89.96%), Postives = 249/269 (92.57%), Query Frame = 0
Query: 1 MLVYHGSSTGFDALVPKIDCIYFNNKLTFRAASVKCVHKQA----------ERRIVKKVG 60
MLV HGSSTGFDALVPKIDCIY++NK FR ASV CVH QA ERR+VKKVG
Sbjct: 1 MLVLHGSSTGFDALVPKIDCIYYHNKCAFRPASVICVHNQAAQPHTSFTTPERRVVKKVG 60
Query: 61 KEEHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR 120
KE HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR
Sbjct: 61 KEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR 120
Query: 121 ILRKRSQWKCVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180
ILRKRSQWK VIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS
Sbjct: 121 ILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180
Query: 181 ISKRLFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFHKLGQEENQKMV 240
ISKR+FSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRR+GRAF KLGQEEN+KMV
Sbjct: 181 ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMV 240
Query: 241 YKRYGCQWKYIHFKGERVRVRRDGWDEDD 260
YKRY CQWKYIHFKGERVRVR+DGWDEDD
Sbjct: 241 YKRYSCQWKYIHFKGERVRVRKDGWDEDD 269
BLAST of Bhi07G000595 vs. ExPASy TrEMBL
Match:
A0A1S3CP50 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502655 PE=4 SV=1)
HSP 1 Score: 489.6 bits (1259), Expect = 8.2e-135
Identity = 242/269 (89.96%), Postives = 249/269 (92.57%), Query Frame = 0
Query: 1 MLVYHGSSTGFDALVPKIDCIYFNNKLTFRAASVKCVHKQA----------ERRIVKKVG 60
MLV HGSSTGFDALVPKIDCIY++NK FR ASV CVH QA ERR+VKKVG
Sbjct: 1 MLVLHGSSTGFDALVPKIDCIYYHNKCAFRPASVICVHNQAAQPHTSFTTPERRVVKKVG 60
Query: 61 KEEHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR 120
KE HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR
Sbjct: 61 KEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR 120
Query: 121 ILRKRSQWKCVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180
ILRKRSQWK VIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS
Sbjct: 121 ILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180
Query: 181 ISKRLFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFHKLGQEENQKMV 240
ISKR+FSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRR+GRAF KLGQEEN+KMV
Sbjct: 181 ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMV 240
Query: 241 YKRYGCQWKYIHFKGERVRVRRDGWDEDD 260
YKRY CQWKYIHFKGERVRVR+DGWDEDD
Sbjct: 241 YKRYSCQWKYIHFKGERVRVRKDGWDEDD 269
BLAST of Bhi07G000595 vs. ExPASy TrEMBL
Match:
A0A0A0KSA5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G189910 PE=4 SV=1)
HSP 1 Score: 479.2 bits (1232), Expect = 1.1e-131
Identity = 237/268 (88.43%), Postives = 247/268 (92.16%), Query Frame = 0
Query: 1 MLVYHGSSTGFDALVPKIDCIYFNNKLTFRAASVKCVHKQA----------ERRIVKKVG 60
MLV+HG+STGFDAL+PKIDCIY++NK TF +SV CVH QA ERR+VKKVG
Sbjct: 1 MLVFHGTSTGFDALMPKIDCIYYHNKFTFTPSSVICVHNQAAQPLTSFTTPERRVVKKVG 60
Query: 61 KEEHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR 120
KE HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR
Sbjct: 61 KETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR 120
Query: 121 ILRKRSQWKCVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180
ILRKRSQWK VIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS
Sbjct: 121 ILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180
Query: 181 ISKRLFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFHKLGQEENQKMV 240
ISKR+FSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRV AF KLGQE+N+KMV
Sbjct: 181 ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVCCAFQKLGQEDNRKMV 240
Query: 241 YKRYGCQWKYIHFKGERVRVRRDGWDED 259
YKRY CQWKYIHFKGERVRVRRDGWDED
Sbjct: 241 YKRYSCQWKYIHFKGERVRVRRDGWDED 268
BLAST of Bhi07G000595 vs. ExPASy TrEMBL
Match:
A0A6J1FWG3 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111447531 PE=4 SV=1)
HSP 1 Score: 475.7 bits (1223), Expect = 1.2e-130
Identity = 241/270 (89.26%), Postives = 245/270 (90.74%), Query Frame = 0
Query: 1 MLVYHGSSTGFDALVPKIDCIYFNNKLTFRAASVKCVHKQ----------AERRIV-KKV 60
ML Y GSSTGFDALVPK CIY NKL FRAASVKCVHKQ AERRIV KKV
Sbjct: 1 MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTGSTTAERRIVKKKV 60
Query: 61 GKEEHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKAL 120
GKE HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAA+KAL
Sbjct: 61 GKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAASKAL 120
Query: 121 RILRKRSQWKCVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTR 180
RILRKRSQWK VIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILH HTR
Sbjct: 121 RILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTR 180
Query: 181 SISKRLFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFHKLGQEENQKM 240
SISKRLFSRMISLY+HHDLQDKIIEIFADMEELGV+PDEDTVRRV AF KLGQEEN KM
Sbjct: 181 SISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKM 240
Query: 241 VYKRYGCQWKYIHFKGERVRVRRDGWDEDD 260
VYKRYGC+WKYIHFKGERVRVRRDGWDEDD
Sbjct: 241 VYKRYGCKWKYIHFKGERVRVRRDGWDEDD 270
BLAST of Bhi07G000595 vs. ExPASy TrEMBL
Match:
A0A6J1K6G2 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111491588 PE=4 SV=1)
HSP 1 Score: 469.9 bits (1208), Expect = 6.7e-129
Identity = 238/270 (88.15%), Postives = 243/270 (90.00%), Query Frame = 0
Query: 1 MLVYHGSSTGFDALVPKIDCIYFNNKLTFRAASVKCVHKQ----------AERRIV-KKV 60
ML Y GSSTGFDALVPK CIY NKL FRAASVKCVHKQ AERRIV KKV
Sbjct: 1 MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTSSTTAERRIVKKKV 60
Query: 61 GKEEHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKAL 120
GKE HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAA+KAL
Sbjct: 61 GKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAASKAL 120
Query: 121 RILRKRSQWKCVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTR 180
RILRKRSQWK VIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILH HTR
Sbjct: 121 RILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTR 180
Query: 181 SISKRLFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFHKLGQEENQKM 240
SISKRLFSRMI+LY+HHDLQDKIIEIFADMEELGV+PDEDTVRRV AF KLGQEEN K
Sbjct: 181 SISKRLFSRMIALYDHHDLQDKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKT 240
Query: 241 VYKRYGCQWKYIHFKGERVRVRRDGWDEDD 260
VYKRYGC+WKYIHFK ERVRVRRDGWDEDD
Sbjct: 241 VYKRYGCKWKYIHFKSERVRVRRDGWDEDD 270
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
AT4G18975.1 | 1.0e-92 | 77.78 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G18975.2 | 1.0e-92 | 77.78 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G18975.3 | 1.0e-92 | 77.78 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G18975.4 | 1.0e-92 | 77.78 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G21190.1 | 6.4e-47 | 46.70 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
Match Name | E-value | Identity | Description | |
Q2V3H0 | 1.4e-91 | 77.78 | Pentatricopeptide repeat-containing protein At4g18975, chloroplastic OS=Arabidop... | [more] |
Q8LG95 | 9.0e-46 | 46.70 | Pentatricopeptide repeat-containing protein At4g21190 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7UD21 | 8.2e-135 | 89.96 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3CP50 | 8.2e-135 | 89.96 | pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 ... | [more] |
A0A0A0KSA5 | 1.1e-131 | 88.43 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G189910 PE=4 SV=1 | [more] |
A0A6J1FWG3 | 1.2e-130 | 89.26 | pentatricopeptide repeat-containing protein At4g18975, chloroplastic OS=Cucurbit... | [more] |
A0A6J1K6G2 | 6.7e-129 | 88.15 | pentatricopeptide repeat-containing protein At4g18975, chloroplastic OS=Cucurbit... | [more] |