Bhi07G000178 (gene) Wax gourd (B227) v1

Overview


Name	Bhi07G000178
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Unknown protein
Location	chr7: 9929168 .. 9930293 (-)
RNA-Seq Expression	Bhi07G000178
Synteny	Bhi07G000178

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATTCCTTACCCATCACATTTATAAACCTCTGAAAAAGAACACCACCTTTGTCTTCTTCAAACACTCGTCCCCCTTTTTAATTTTTATTTTTTTTTTTTTTATAAAAACATTATCTTATCTCTCTCTTCTTTTCTTTCAAATTCAATTGGGTTCCAAATTTCCATCAATGTCCATCCCCCAACTGCCATTTTCACCTTCTAATTTCATTGCCACTTCCAATAATAATACTCCCAAGGTTCAGAGGGTATCCAAATCCACTTCAGACAGATTGCTTCAGAAATTCTTCGATGCCACTGAATTTGGATTCGATTACGAAACAAGTGGCCTTTGGTCTCCCCCTCTTCAACGCAGTGTTTATTTGAGCTCTTCGGGTCAAGTTTTCAATCAAACGGATTTGCATACCAAACTTCAGACGGTGTTGAATTCTCGTAGAAGAAGACATAAAAGTTGTTTCAAATTCAGAGTAAGCTGCTGCCTCTGCCTACCCTCTTTTTTCTCTTTTAATTTCTTTCTCTCTTTCGCTTTACATTTGGTACTTTGGTTTCAGATAATCTCTTCATATATTGCTTTCTGTTTAGAATTAGATGTGTGCAGTTTATATGTTGTAGGTGTTTTGGTGCTCTGTGAGGCCCAAAGCTGCAATCTGTCATCTTTAGTGCTATGCTTCCATTTTTGCTTAATGGGGATCGATGATAATGGAGTTTCAAAGTCCCAGCGTAGAAAACAAAAGCAGAGGGGGGCCCTCTAGAAGAAAAAAGATCCATCCCATACAGTTCCTATTTTGTACAAGTTCAATAGTTGATATAACTGATTGATTGTTGCTGATCCAAAGTTCAAAACATGAATCTCTTTGACCTGTTCACTAACACCCATCAACTCTTTCTTTTTCCCCTTATGAATATGACATTATTACAATGAAGAAGTTTACTGTTGAGTTATGTTTATAATGGGGGTTTGAATTATAACTTCGTTGGGTGAAATTACATGGAATCCAATGCCACATTTTAAGGAAGACAATATAAAATCAAAACTTGTGGGAAAGTGGAAAAAAACAAAGAGGGCATAAGAGGGTGAATTTAGATTAACGTAGATCCGCCTCAAATTTGGAGCCACTGATAGCCGGG

mRNA sequence

ATATTCCTTACCCATCACATTTATAAACCTCTGAAAAAGAACACCACCTTTGTCTTCTTCAAACACTCGTCCCCCTTTTTAATTTTTATTTTTTTTTTTTTTATAAAAACATTATCTTATCTCTCTCTTCTTTTCTTTCAAATTCAATTGGGTTCCAAATTTCCATCAATGTCCATCCCCCAACTGCCATTTTCACCTTCTAATTTCATTGCCACTTCCAATAATAATACTCCCAAGGTTCAGAGGGTATCCAAATCCACTTCAGACAGATTGCTTCAGAAATTCTTCGATGCCACTGAATTTGGATTCGATTACGAAACAAGTGGCCTTTGGTCTCCCCCTCTTCAACGCAGTGTTTATTTGAGCTCTTCGGGTCAAGTTTTCAATCAAACGGATTTGCATACCAAACTTCAGACGGTGTTGAATTCTCGTAGAAGAAGACATAAAAGTTGTTTCAAATTCAGAGTGTTTTGGTGCTCTGTGAGGCCCAAAGCTGCAATCTGTCATCTTTAGTGCTATGCTTCCATTTTTGCTTAATGGGGATCGATGATAATGGAGTTTCAAAGTCCCAGCGTAGAAAACAAAAGCAGAGGGGGGCCCTCTAGAAGAAAAAAGATCCATCCCATACAGTTCCTATTTTGTACAAGTTCAATAGTTGATATAACTGATTGATTGTTGCTGATCCAAAGTTCAAAACATGAATCTCTTTGACCTGTTCACTAACACCCATCAACTCTTTCTTTTTCCCCTTATGAATATGACATTATTACAATGAAGAAGTTTACTGTTGAGTTATGTTTATAATGGGGGTTTGAATTATAACTTCGTTGGGTGAAATTACATGGAATCCAATGCCACATTTTAAGGAAGACAATATAAAATCAAAACTTGTGGGAAAGTGGAAAAAAACAAAGAGGGCATAAGAGGGTGAATTTAGATTAACGTAGATCCGCCTCAAATTTGGAGCCACTGATAGCCGGG

Coding sequence (CDS)

ATGTCCATCCCCCAACTGCCATTTTCACCTTCTAATTTCATTGCCACTTCCAATAATAATACTCCCAAGGTTCAGAGGGTATCCAAATCCACTTCAGACAGATTGCTTCAGAAATTCTTCGATGCCACTGAATTTGGATTCGATTACGAAACAAGTGGCCTTTGGTCTCCCCCTCTTCAACGCAGTGTTTATTTGAGCTCTTCGGGTCAAGTTTTCAATCAAACGGATTTGCATACCAAACTTCAGACGGTGTTGAATTCTCGTAGAAGAAGACATAAAAGTTGTTTCAAATTCAGAGTGTTTTGGTGCTCTGTGAGGCCCAAAGCTGCAATCTGTCATCTTTAG

Protein sequence

MSIPQLPFSPSNFIATSNNNTPKVQRVSKSTSDRLLQKFFDATEFGFDYETSGLWSPPLQRSVYLSSSGQVFNQTDLHTKLQTVLNSRRRRHKSCFKFRVFWCSVRPKAAICHL

Homology

[Close]

BLAST of Bhi07G000178 vs. ExPASy TrEMBL
Match: A0A0A0KLQ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519730 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 6.8e-41
Identity = 88/106 (83.02%), Postives = 92/106 (86.79%), Query Frame = 0


Query: 1   MSIPQLPFSPSNFIATSNNNTPKVQRVSKSTSDRLLQKFFDATEFGFDYETSGLWSPPLQ 60
           MSIP+LPFSPSN         PKVQRVSKSTSDRLLQKFFDATEFGFDYE SGLWSPPLQ
Sbjct: 1   MSIPELPFSPSN---------PKVQRVSKSTSDRLLQKFFDATEFGFDYERSGLWSPPLQ 60

Query: 61  RSVYLSSSGQVFNQTDLHTKLQTVLNSRRRRHKSCFKFRVFWCSVR 107
           R+VYL+SSGQV NQTDLHTKLQTVLNSR R HKSCFKFRVFWC V+
Sbjct: 61  RTVYLTSSGQVLNQTDLHTKLQTVLNSRSRTHKSCFKFRVFWCYVK 97

[Close]

BLAST of Bhi07G000178 vs. ExPASy TrEMBL
Match: A0A314YAR0 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_33883 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 8.6e-20
Identity = 49/83 (59.04%), Postives = 64/83 (77.11%), Query Frame = 0


Query: 22  PKVQRVSKSTSDRLLQKFFDATEFGFDYETSGLWSPPLQRSVYLSSSGQVFNQTDLHTKL 81
           P VQ V KSTSDRLLQKFFDA EF FDYE SGLWSPP++R+V+LSS G++F + ++  KL
Sbjct: 28  PMVQLVPKSTSDRLLQKFFDAAEFDFDYEQSGLWSPPVKRTVFLSSQGRIFTEQEMLAKL 87

Query: 82  QTVLNSRRRRHKSCFKFRVFWCS 105
            T++++   +HK+C   R FWCS
Sbjct: 88  STLMDAPTSKHKAC--CRAFWCS 108

[Close]

BLAST of Bhi07G000178 vs. ExPASy TrEMBL
Match: A0A314ZRE6 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_19857 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 8.6e-20
Identity = 49/83 (59.04%), Postives = 64/83 (77.11%), Query Frame = 0


Query: 22  PKVQRVSKSTSDRLLQKFFDATEFGFDYETSGLWSPPLQRSVYLSSSGQVFNQTDLHTKL 81
           P VQ V KSTSDRLLQKFFDA EF FDYE SGLWSPP++R+V+LSS G++F + ++  KL
Sbjct: 28  PMVQLVPKSTSDRLLQKFFDAAEFDFDYEQSGLWSPPVKRTVFLSSQGRIFTEQEMLAKL 87

Query: 82  QTVLNSRRRRHKSCFKFRVFWCS 105
            T++++   +HK+C   R FWCS
Sbjct: 88  STLMDAPTSKHKAC--CRAFWCS 108

[Close]

BLAST of Bhi07G000178 vs. ExPASy TrEMBL
Match: A0A6P5SBA8 (uncharacterized protein LOC110756101 isoform X1 OS=Prunus avium OX=42229 GN=LOC110756101 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 8.6e-20
Identity = 49/83 (59.04%), Postives = 64/83 (77.11%), Query Frame = 0


Query: 22  PKVQRVSKSTSDRLLQKFFDATEFGFDYETSGLWSPPLQRSVYLSSSGQVFNQTDLHTKL 81
           P VQ V KSTSDRLLQKFFDA EF FDYE SGLWSPP++R+V+LSS G++F + ++  KL
Sbjct: 28  PMVQLVPKSTSDRLLQKFFDAAEFDFDYEQSGLWSPPVKRTVFLSSQGKIFTEQEMLAKL 87

Query: 82  QTVLNSRRRRHKSCFKFRVFWCS 105
            T++++   +HK+C   R FWCS
Sbjct: 88  STLMDAPTSKHKAC--CRAFWCS 108

[Close]

BLAST of Bhi07G000178 vs. ExPASy TrEMBL
Match: D7TJP6 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_10s0003g01630 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 1.2e-18
Identity = 54/96 (56.25%), Postives = 72/96 (75.00%), Query Frame = 0


Query: 9   SPSNFIATSNNNTPKVQRVSKSTSDRLLQKFFDATEFGFDYETSGLWSPPLQRSVYLSSS 68
           SPS   A+ + +  +VQ VSKS SDRLLQKFFD++EF FDYE SGLWSPP++RSV+LSS 
Sbjct: 7   SPSLPGASPSPSPLRVQVVSKSVSDRLLQKFFDSSEFDFDYEQSGLWSPPIRRSVFLSSP 66

Query: 69  GQVFNQTDLHTKLQTVLNSRR-RRHKSCFKFRVFWC 104
           G++FN+ ++  KL++V  SRR R+ + C  F  FWC
Sbjct: 67  GKIFNEHEMLAKLKSVTGSRRGRKRRVC--FYAFWC 100

The following BLAST results are available for this feature:

BLAST of Bhi07G000178 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi07G000178 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi07G000178 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KLQ8	6.8e-41	83.02	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519730 PE=4 SV=1	[more]
A0A314YAR0	8.6e-20	59.04	Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_338...	[more]
A0A314ZRE6	8.6e-20	59.04	Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_198...	[more]
A0A6P5SBA8	8.6e-20	59.04	uncharacterized protein LOC110756101 isoform X1 OS=Prunus avium OX=42229 GN=LOC1...	[more]
D7TJP6	1.2e-18	56.25	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_10s0003g01630 PE=4 SV=...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34287	OS06G0551500 PROTEIN-RELATED	coord: 14..103
None	No IPR available	PANTHER	PTHR34287:SF2	OS06G0551500 PROTEIN	coord: 14..103

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi07M000178	Bhi07M000178	mRNA