Bhi06G001724 (gene) Wax gourd (B227) v1

Overview


Name	Bhi06G001724
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Unknown protein
Location	chr6: 55649631 .. 55650071 (+)
RNA-Seq Expression	Bhi06G001724
Synteny	Bhi06G001724

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAATCGGTTTCCACGGTTTTGTTTACTTGAGAACCATGGACTTTCGTTCAGTTTATGGTTTGACCCAAAATTGGACCAAATTGAACCACGCCTACTTGTTAGATATATTTGGGAACAAAACCCTTTTCGTATATTTGACGATCGGTAAGGTTTTGATTTCGCCTTTTTACTTGGACCGGTATGGTCGGAGGCCAATTTTGTTATTGGGCTTGACCGGAATGGCTTTGTTCGTTGCTTTGGCTGGGCCTGGGCTCGAAATTTCTGGAGTATTCAGATATGAAACCAAAATGGGCCATTGGGCTTTGCGTGGTGGCCGTTTGTGCAGCCCTGTCGTTGTTTTGTATTGGGCTTGGGCCCATCACGTGGCTTTATTCGTCCGAAATATTCCCGTCAAGATTGCAGGCCGGCCCAAGGTTTTAGCCTGGCGGTCTCGTTGA

mRNA sequence

ATGGAAATCGGTTTCCACGGTTTTGTTTACTTGAGAACCATGGACTTTCGTTCAGTTTATGGTTTGACCCAAAATTGGACCAAATTGAACCACGCCTACTTGTTAGATATATTTGGGAACAAAACCCTTTTCGTATATTTGACGATCGGTAAGGTTTTGATTTCGCCTTTTTACTTGGACCGGTATGGTCGGAGGCCAATTTTGTTATTGGGCTTGACCGGAATGGCTTTGTTCGTTGCTTTGGCTGGGCCTGGGCTCGAAATTTCTGGAGTATTCAGATATGAAACCAAAATGGGCCATTGGGCTTTGCGTGGTGGCCGTTTGTGCAGCCCTGTCGTTGTTTTGTATTGGGCTTGGGCCCATCACGTGGCTTTATTCGTCCGAAATATTCCCGTCAAGATTGCAGGCCGGCCCAAGGTTTTAGCCTGGCGGTCTCGTTGA

Coding sequence (CDS)

ATGGAAATCGGTTTCCACGGTTTTGTTTACTTGAGAACCATGGACTTTCGTTCAGTTTATGGTTTGACCCAAAATTGGACCAAATTGAACCACGCCTACTTGTTAGATATATTTGGGAACAAAACCCTTTTCGTATATTTGACGATCGGTAAGGTTTTGATTTCGCCTTTTTACTTGGACCGGTATGGTCGGAGGCCAATTTTGTTATTGGGCTTGACCGGAATGGCTTTGTTCGTTGCTTTGGCTGGGCCTGGGCTCGAAATTTCTGGAGTATTCAGATATGAAACCAAAATGGGCCATTGGGCTTTGCGTGGTGGCCGTTTGTGCAGCCCTGTCGTTGTTTTGTATTGGGCTTGGGCCCATCACGTGGCTTTATTCGTCCGAAATATTCCCGTCAAGATTGCAGGCCGGCCCAAGGTTTTAGCCTGGCGGTCTCGTTGA

Protein sequence

MEIGFHGFVYLRTMDFRSVYGLTQNWTKLNHAYLLDIFGNKTLFVYLTIGKVLISPFYLDRYGRRPILLLGLTGMALFVALAGPGLEISGVFRYETKMGHWALRGGRLCSPVVVLYWAWAHHVALFVRNIPVKIAGRPKVLAWRSR

Homology

[Close]

BLAST of Bhi06G001724 vs. ExPASy TrEMBL
Match: A0A0A0LIT7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004670 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 6.5e-04
Identity = 27/58 (46.55%), Postives = 33/58 (56.90%), Query Frame = 0


Query: 77  LFVALAGPGLEISGVFRYETKMGHWALRGGRLCSPVVVLYWAWAHHVALFVRNIPVKI 135
           LF+  AGP L++SG FRYE KM  WAL+  RL  P     WAWA+   L V   P  +
Sbjct: 5   LFIDWAGPVLDMSGAFRYEAKMTDWALKVSRLYEP-SFFNWAWAYCAGLSVEIFPSSV 61

The following BLAST results are available for this feature:

BLAST of Bhi06G001724 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi06G001724 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi06G001724 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LIT7	6.5e-04	46.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004670 PE=4 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036259	MFS transporter superfamily	GENE3D	1.20.1250.20	MFS general substrate transporter like domains	coord: 20..132 e-value: 2.2E-5 score: 26.3

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi06M001724	Bhi06M001724	mRNA