Bhi06G001703 (gene) Wax gourd (B227) v1

Overview
NameBhi06G001703
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionATP synthase subunit 9, mitochondrial
Locationchr6: 55008537 .. 55008752 (-)
RNA-Seq ExpressionBhi06G001703
SyntenyBhi06G001703
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGTTTCAATCTGAGATGTTAGAAGGTGCAAAATCAATGGGTGCCGAAGCTACTACAATTGCTTCAGCGGGAGATGTTGTCGGTATTGGAAACATGTTCAGTTGTTTGATCCATTCCGTGGCGCGAAATCCATCATTGGCAAAACAATCATTTGGTTATGCCATTTTGAGCTTTACTCTCGCGAGTTGGTCAGAAGTCAATCTTGTTTGGTAA

mRNA sequence

ATGAGGTTTCAATCTGAGATGTTAGAAGGTGCAAAATCAATGGGTGCCGAAGCTACTACAATTGCTTCAGCGGGAGATGTTGTCGGTATTGGAAACATGTTCAGTTGTTTGATCCATTCCGTGGCGCGAAATCCATCATTGGCAAAACAATCATTTGGTTATGCCATTTTGAGCTTTACTCTCGCGAGTTGGTCAGAAGTCAATCTTGTTTGGTAA

Coding sequence (CDS)

ATGAGGTTTCAATCTGAGATGTTAGAAGGTGCAAAATCAATGGGTGCCGAAGCTACTACAATTGCTTCAGCGGGAGATGTTGTCGGTATTGGAAACATGTTCAGTTGTTTGATCCATTCCGTGGCGCGAAATCCATCATTGGCAAAACAATCATTTGGTTATGCCATTTTGAGCTTTACTCTCGCGAGTTGGTCAGAAGTCAATCTTGTTTGGTAA

Protein sequence

MRFQSEMLEGAKSMGAEATTIASAGDVVGIGNMFSCLIHSVARNPSLAKQSFGYAILSFTLASWSEVNLVW
Homology
[Close]
BLAST of Bhi06G001703 vs. TAIR 10
Match: AT2G07671.1 (ATP synthase subunit C family protein )

HSP 1 Score: 90.1 bits (222), Expect = 7.6e-19
Identity = 47/58 (81.03%), Postives = 50/58 (86.21%), Query Frame = 0 

Query: 4  QSEMLEGAKSMGAEATTIASAGDVVGIGNMFSCLIHSVARNPSLAKQSFGYAILSFTL 62
          Q EMLEGAKS+GA A TIASAG  +GIGN+FS LIHSVARNPSLAKQSFGYAIL F L
Sbjct: 9  QPEMLEGAKSIGAGAATIASAGAAIGIGNVFSSLIHSVARNPSLAKQSFGYAILGFAL 66

[Close]
BLAST of Bhi06G001703 vs. TAIR 10
Match: ATMG01080.1 (mitochondrial F0-ATPase subunit 9 )

HSP 1 Score: 90.1 bits (222), Expect = 7.6e-19
Identity = 47/58 (81.03%), Postives = 50/58 (86.21%), Query Frame = 0 

Query: 4  QSEMLEGAKSMGAEATTIASAGDVVGIGNMFSCLIHSVARNPSLAKQSFGYAILSFTL 62
          Q EMLEGAKS+GA A TIASAG  +GIGN+FS LIHSVARNPSLAKQSFGYAIL F L
Sbjct: 9  QPEMLEGAKSIGAGAATIASAGAAIGIGNVFSSLIHSVARNPSLAKQSFGYAILGFAL 66

[Close]
BLAST of Bhi06G001703 vs. TAIR 10
Match: ATMG00040.1 (ATP synthase subunit C family protein )

HSP 1 Score: 69.3 bits (168), Expect = 1.4e-12
Identity = 36/45 (80.00%), Postives = 39/45 (86.67%), Query Frame = 0 

Query: 4  QSEMLEGAKSMGAEATTIASAGDVVGIGNMFSCLIHSVARNPSLA 49
          Q EMLEGAKS+GA A TIASAG  +GIGN+FS LIHSVARNPSLA
Sbjct: 9  QPEMLEGAKSIGAGAATIASAGAAIGIGNVFSSLIHSVARNPSLA 53

[Close]
BLAST of Bhi06G001703 vs. ExPASy Swiss-Prot
Match: P60113 (ATP synthase subunit 9, mitochondrial OS=Brassica napus OX=3708 GN=ATP9 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 9.1e-17
Identity = 45/55 (81.82%), Postives = 48/55 (87.27%), Query Frame = 0 

Query: 7  MLEGAKSMGAEATTIASAGDVVGIGNMFSCLIHSVARNPSLAKQSFGYAILSFTL 62
          MLEGAKS+GA A TIASAG  +GIGN+FS LIHSVARNPSLAKQSFGYAIL F L
Sbjct: 1  MLEGAKSIGAGAATIASAGAAIGIGNVFSSLIHSVARNPSLAKQSFGYAILGFAL 55

[Close]
BLAST of Bhi06G001703 vs. ExPASy Swiss-Prot
Match: Q37550 (ATP synthase subunit 9, mitochondrial OS=Malus domestica OX=3750 GN=ATP9 PE=3 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 9.1e-17
Identity = 45/55 (81.82%), Postives = 48/55 (87.27%), Query Frame = 0 

Query: 7  MLEGAKSMGAEATTIASAGDVVGIGNMFSCLIHSVARNPSLAKQSFGYAILSFTL 62
          MLEGAKS+GA A TIASAG  +GIGN+FS LIHSVARNPSLAKQSFGYAIL F L
Sbjct: 1  MLEGAKSIGAGAATIASAGAAIGIGNVFSSLIHSVARNPSLAKQSFGYAILGFAL 55

[Close]
BLAST of Bhi06G001703 vs. ExPASy Swiss-Prot
Match: P14571 (ATP synthase subunit 9, mitochondrial OS=Beta vulgaris OX=161934 GN=ATP9 PE=3 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 3.5e-16
Identity = 44/56 (78.57%), Postives = 48/56 (85.71%), Query Frame = 0 

Query: 7  MLEGAKSMGAEATTIASAGDVVGIGNMFSCLIHSVARNPSLAKQSFGYAILSFTLA 63
          MLEGAKS+GA A TIASAG  +GIGN+FS LIHSVARNPSLAKQ FGYAIL F L+
Sbjct: 1  MLEGAKSIGAGAATIASAGAAIGIGNVFSSLIHSVARNPSLAKQLFGYAILGFALS 56

[Close]
BLAST of Bhi06G001703 vs. ExPASy Swiss-Prot
Match: P69420 (ATP synthase subunit 9, mitochondrial OS=Pisum sativum OX=3888 GN=ATP9 PE=3 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 3.5e-16
Identity = 45/55 (81.82%), Postives = 47/55 (85.45%), Query Frame = 0 

Query: 7  MLEGAKSMGAEATTIASAGDVVGIGNMFSCLIHSVARNPSLAKQSFGYAILSFTL 62
          MLEGAKS+GA A TIASAG  VGIGN+FS LIHSVARNPSLAKQ FGYAIL F L
Sbjct: 1  MLEGAKSIGAGAATIASAGAAVGIGNVFSSLIHSVARNPSLAKQLFGYAILGFAL 55

[Close]
BLAST of Bhi06G001703 vs. ExPASy Swiss-Prot
Match: P69421 (ATP synthase subunit 9, mitochondrial OS=Glycine max OX=3847 GN=ATP9 PE=3 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 3.5e-16
Identity = 45/55 (81.82%), Postives = 47/55 (85.45%), Query Frame = 0 

Query: 7  MLEGAKSMGAEATTIASAGDVVGIGNMFSCLIHSVARNPSLAKQSFGYAILSFTL 62
          MLEGAKS+GA A TIASAG  VGIGN+FS LIHSVARNPSLAKQ FGYAIL F L
Sbjct: 1  MLEGAKSIGAGAATIASAGAAVGIGNVFSSLIHSVARNPSLAKQLFGYAILGFAL 55

[Close]
BLAST of Bhi06G001703 vs. ExPASy TrEMBL
Match: A0A7L9QAP9 (ATP synthase subunit 9, mitochondrial OS=Malania oleifera OX=397392 GN=atp9 PE=3 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.0e-15
Identity = 49/58 (84.48%), Postives = 50/58 (86.21%), Query Frame = 0 

Query: 4  QSEMLEGAKSMGAEATTIASAGDVVGIGNMFSCLIHSVARNPSLAKQSFGYAILSFTL 62
          Q EMLEGAKSMGA A TIASAG  VGIGN+FS LIHSVARNPSLAKQSFGYAIL F L
Sbjct: 9  QPEMLEGAKSMGAGAATIASAGAAVGIGNVFSSLIHSVARNPSLAKQSFGYAILGFAL 66

[Close]
BLAST of Bhi06G001703 vs. ExPASy TrEMBL
Match: A0A5C2FTY7 (ATP synthase subunit 9, mitochondrial OS=Spondias mombin OX=80338 GN=atp9 PE=3 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.0e-15
Identity = 49/58 (84.48%), Postives = 50/58 (86.21%), Query Frame = 0 

Query: 4  QSEMLEGAKSMGAEATTIASAGDVVGIGNMFSCLIHSVARNPSLAKQSFGYAILSFTL 62
          Q EMLEGAKSMGA A TIASAG  VGIGN+FS LIHSVARNPSLAKQSFGYAIL F L
Sbjct: 9  QPEMLEGAKSMGAGAATIASAGAAVGIGNVFSSLIHSVARNPSLAKQSFGYAILGFAL 66

[Close]
BLAST of Bhi06G001703 vs. ExPASy TrEMBL
Match: A0A5C2FV42 (ATP synthase subunit 9, mitochondrial OS=Spondias tuberosa OX=991123 GN=atp9 PE=3 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.0e-15
Identity = 49/58 (84.48%), Postives = 50/58 (86.21%), Query Frame = 0 

Query: 4  QSEMLEGAKSMGAEATTIASAGDVVGIGNMFSCLIHSVARNPSLAKQSFGYAILSFTL 62
          Q EMLEGAKSMGA A TIASAG  VGIGN+FS LIHSVARNPSLAKQSFGYAIL F L
Sbjct: 9  QPEMLEGAKSMGAGAATIASAGAAVGIGNVFSSLIHSVARNPSLAKQSFGYAILGFAL 66

[Close]
BLAST of Bhi06G001703 vs. ExPASy TrEMBL
Match: A0A385FBY0 (ATP synthase subunit 9, mitochondrial OS=Brassica juncea OX=3707 GN=atp9 PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.4e-15
Identity = 47/59 (79.66%), Postives = 51/59 (86.44%), Query Frame = 0 

Query: 3  FQSEMLEGAKSMGAEATTIASAGDVVGIGNMFSCLIHSVARNPSLAKQSFGYAILSFTL 62
          +Q EMLEGAKS+GA A TIASAG  +GIGN+FS LIHSVARNPSLAKQSFGYAIL F L
Sbjct: 8  YQPEMLEGAKSIGAGAATIASAGAAIGIGNVFSSLIHSVARNPSLAKQSFGYAILGFAL 66

[Close]
BLAST of Bhi06G001703 vs. ExPASy TrEMBL
Match: A0A078I5Y5 (ATP synthase F0 subunit 9 OS=Brassica napus OX=3708 GN=BnaCnng12660D PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.4e-15
Identity = 47/59 (79.66%), Postives = 51/59 (86.44%), Query Frame = 0 

Query: 3  FQSEMLEGAKSMGAEATTIASAGDVVGIGNMFSCLIHSVARNPSLAKQSFGYAILSFTL 62
          +Q EMLEGAKS+GA A TIASAG  +GIGN+FS LIHSVARNPSLAKQSFGYAIL F L
Sbjct: 8  YQPEMLEGAKSIGAGAATIASAGAAIGIGNVFSSLIHSVARNPSLAKQSFGYAILGFAL 66

The following BLAST results are available for this feature:
BLAST of Bhi06G001703 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G07671.17.6e-1981.03ATP synthase subunit C family protein [more]
ATMG01080.17.6e-1981.03mitochondrial F0-ATPase subunit 9 [more]
ATMG00040.11.4e-1280.00ATP synthase subunit C family protein [more]
BLAST of Bhi06G001703 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P601139.1e-1781.82ATP synthase subunit 9, mitochondrial OS=Brassica napus OX=3708 GN=ATP9 PE=2 SV=... [more]
Q375509.1e-1781.82ATP synthase subunit 9, mitochondrial OS=Malus domestica OX=3750 GN=ATP9 PE=3 SV... [more]
P145713.5e-1678.57ATP synthase subunit 9, mitochondrial OS=Beta vulgaris OX=161934 GN=ATP9 PE=3 SV... [more]
P694203.5e-1681.82ATP synthase subunit 9, mitochondrial OS=Pisum sativum OX=3888 GN=ATP9 PE=3 SV=1[more]
P694213.5e-1681.82ATP synthase subunit 9, mitochondrial OS=Glycine max OX=3847 GN=ATP9 PE=3 SV=1[more]
BLAST of Bhi06G001703 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A7L9QAP91.0e-1584.48ATP synthase subunit 9, mitochondrial OS=Malania oleifera OX=397392 GN=atp9 PE=3... [more]
A0A5C2FTY71.0e-1584.48ATP synthase subunit 9, mitochondrial OS=Spondias mombin OX=80338 GN=atp9 PE=3 S... [more]
A0A5C2FV421.0e-1584.48ATP synthase subunit 9, mitochondrial OS=Spondias tuberosa OX=991123 GN=atp9 PE=... [more]
A0A385FBY01.4e-1579.66ATP synthase subunit 9, mitochondrial OS=Brassica juncea OX=3707 GN=atp9 PE=3 SV... [more]
A0A078I5Y51.4e-1579.66ATP synthase F0 subunit 9 OS=Brassica napus OX=3708 GN=BnaCnng12660D PE=3 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000454ATP synthase, F0 complex, subunit CPRINTSPR00124ATPASECcoord: 52..71
score: 19.23
coord: 14..33
score: 40.29
coord: 35..50
score: 48.04
IPR000454ATP synthase, F0 complex, subunit CPANTHERPTHR10031ATP SYNTHASE LIPID-BINDING PROTEIN, MITOCHONDRIALcoord: 7..62
IPR038662F1F0 ATP synthase subunit C superfamilyGENE3D1.20.20.10F1F0 ATP synthase subunit Ccoord: 9..67
e-value: 1.0E-14
score: 56.4
NoneNo IPR availablePANTHERPTHR10031:SF38ATP SYNTHASE SUBUNIT 9, MITOCHONDRIALcoord: 7..62
IPR035921F/V-ATP synthase subunit C superfamilySUPERFAMILY81333F1F0 ATP synthase subunit Ccoord: 7..63

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi06M001703Bhi06M001703mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019646 aerobic electron transport chain
biological_process GO:0015986 ATP synthesis coupled proton transport
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
cellular_component GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o)
molecular_function GO:0005524 ATP binding
molecular_function GO:0004129 cytochrome-c oxidase activity
molecular_function GO:0008289 lipid binding
molecular_function GO:0015078 proton transmembrane transporter activity