Bhi06G001551 (gene) Wax gourd (B227) v1

Overview
NameBhi06G001551
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionUnknown protein
Locationchr6: 50979666 .. 50980076 (-)
RNA-Seq ExpressionBhi06G001551
SyntenyBhi06G001551
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGGTTAGCTCTATCGTGTGATGCTGCTTTGGGTGTTGCCTATTGCAGGAGAAGGTATCAACTACGTGCTTCGGGACCACGGAGGAGTACTCATTATTGCTGGTGCAAACACTATGAAAGGAAATTGTGATGTGTTATATGCTGAGATTAATGTGATTGTTGAAGGACTTCGGGAAGTGACCTCGAGGGTGCAATTGCCTTTAGTGGTGGAGTCAAGCTGCATAGTAGTTGTATACTTGTTGGCCAGTAGCTGTAGGGATAATTTTTTAGGGACTCATCATGAGCTTCAGTTTTATCACATTCGAAGTTTTCAGAATTTTCTTGCAAATGGGTTGACTTGTAGAATGCGAATGGGTCTCAATTTCAAGTTTAGCAGGATCATTTTCTTGATTGGTTGTGTTATCTAG

mRNA sequence

ATGGCTGGAGAAGGTATCAACTACGTGCTTCGGGACCACGGAGGAGTACTCATTATTGCTGGTGCAAACACTATGAAAGGAAATTGTGATGTGTTATATGCTGAGATTAATGTGATTGTTGAAGGACTTCGGGAAGTGACCTCGAGGGTGCAATTGCCTTTAGTGGTGGAGTCAAGCTGCATAGTAGTTGTATACTTGTTGGCCAGTAGCTGTAGGGATAATTTTTTAGGGACTCATCATGAGCTTCAGTTTTATCACATTCGAAGTTTTCAGAATTTTCTTGCAAATGGGTTGACTTGTAGAATGCGAATGGGTCTCAATTTCAAGTTTAGCAGGATCATTTTCTTGATTGGTTGTGTTATCTAG

Coding sequence (CDS)

ATGGCTGGAGAAGGTATCAACTACGTGCTTCGGGACCACGGAGGAGTACTCATTATTGCTGGTGCAAACACTATGAAAGGAAATTGTGATGTGTTATATGCTGAGATTAATGTGATTGTTGAAGGACTTCGGGAAGTGACCTCGAGGGTGCAATTGCCTTTAGTGGTGGAGTCAAGCTGCATAGTAGTTGTATACTTGTTGGCCAGTAGCTGTAGGGATAATTTTTTAGGGACTCATCATGAGCTTCAGTTTTATCACATTCGAAGTTTTCAGAATTTTCTTGCAAATGGGTTGACTTGTAGAATGCGAATGGGTCTCAATTTCAAGTTTAGCAGGATCATTTTCTTGATTGGTTGTGTTATCTAG

Protein sequence

MAGEGINYVLRDHGGVLIIAGANTMKGNCDVLYAEINVIVEGLREVTSRVQLPLVVESSCIVVVYLLASSCRDNFLGTHHELQFYHIRSFQNFLANGLTCRMRMGLNFKFSRIIFLIGCVI
Homology
The following BLAST results are available for this feature:
BLAST of Bhi06G001551 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi06G001551 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi06G001551 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 5..71
e-value: 4.1E-6
score: 26.6

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi06M001551Bhi06M001551mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity