Bhi06G001540 (gene) Wax gourd (B227) v1

Overview


Name	Bhi06G001540
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Calcium-transporting ATPase
Location	chr6: 50575703 .. 50576193 (+)
RNA-Seq Expression	Bhi06G001540
Synteny	Bhi06G001540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAGATCTTCCCTATTTGACAAGCTTCTTATGGTACAATGCTTGAAGAATTTAGGCCATGTAGTGGCAGTCACAGGGGATGGAACAAATGATGCCCCTGCTCTTCGTGAGGCAGACATTGGTCTTTCCATGTGAATTCAAGGAACCAAAGTTGCAAAAGAGAGCTCGGATATTATGACAACTTTGAGTCGGTCGTCACGGTTTTGAAATGAGGAAGATGTGTTTACAACAATATCCAAAAGTTCATTGCAGCATTAGTAGTGAACTTCATTGATGTTGTGTCTTCTGCTAAAGTCCATCTAACAGCAGTTCAGTTATTATGGGTGAATATCATAATGAACACTATGGGAGCTTTAGCCTTAACCATTGAGCTACCCACCAATGATCTCATGGCGAAAACGTTGGTCGATCAAGCTGAACCGTTGGTGATGAAAGTCATAAGGAGGAACCTCATTGCACAGGTTGTGTATCAAGTGACAGGATTGTAG

mRNA sequence

ATGGCTAGATCTTCCCTATTTGACAAGCTTCTTATGGTACAATGCTTGAAGAATTTAGGCCATGTAGTGGCAGTCACAGGGGATGGAACAAATGATGCCCCTGCTCTTCCATTAGTAGTGAACTTCATTGATGTTGTGTCTTCTGCTAAAGTCCATCTAACAGCAGTTCAGTTATTATGGGTGAATATCATAATGAACACTATGGGAGCTTTAGCCTTAACCATTGAGCTACCCACCAATGATCTCATGGCGAAAACGTTGGTCGATCAAGCTGAACCGTTGGTGATGAAAGTCATAAGGAGGAACCTCATTGCACAGGTTGTGTATCAAGTGACAGGATTGTAG

Coding sequence (CDS)

ATGGCTAGATCTTCCCTATTTGACAAGCTTCTTATGGTACAATGCTTGAAGAATTTAGGCCATGTAGTGGCAGTCACAGGGGATGGAACAAATGATGCCCCTGCTCTTCCATTAGTAGTGAACTTCATTGATGTTGTGTCTTCTGCTAAAGTCCATCTAACAGCAGTTCAGTTATTATGGGTGAATATCATAATGAACACTATGGGAGCTTTAGCCTTAACCATTGAGCTACCCACCAATGATCTCATGGCGAAAACGTTGGTCGATCAAGCTGAACCGTTGGTGATGAAAGTCATAAGGAGGAACCTCATTGCACAGGTTGTGTATCAAGTGACAGGATTGTAG

Protein sequence

MARSSLFDKLLMVQCLKNLGHVVAVTGDGTNDAPALPLVVNFIDVVSSAKVHLTAVQLLWVNIIMNTMGALALTIELPTNDLMAKTLVDQAEPLVMKVIRRNLIAQVVYQVTGL

Homology

[Close]

BLAST of Bhi06G001540 vs. TAIR 10
Match: AT3G22910.1 (ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein )

HSP 1 Score: 119.0 bits (297), Expect = 2.5e-27
Identity = 76/174 (43.68%), Postives = 91/174 (52.30%), Query Frame = 0


Query: 1   MARSSLFDKLLMVQCLKNLGHVVAVTGDGTNDAPAL------------------------ 60
           MARSS FDKLLMV+CLK LGHVVAVTGDGTNDAPAL                        
Sbjct: 720 MARSSPFDKLLMVKCLKELGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIV 779

Query: 61  ------------------------------------PLVVNFIDVVSSAKVHLTAVQLLW 115
                                                LV+NF+  VS+  V LTAVQLLW
Sbjct: 780 ILDDNFASVATVLKWGRCVYNNIQKFIQFQLTVNVAALVINFVAAVSAGDVPLTAVQLLW 839

[Close]

BLAST of Bhi06G001540 vs. TAIR 10
Match: AT3G63380.1 (ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein )

HSP 1 Score: 106.3 bits (264), Expect = 1.7e-23
Identity = 71/174 (40.80%), Postives = 89/174 (51.15%), Query Frame = 0


Query: 1   MARSSLFDKLLMVQCLKNLGHVVAVTGDGTNDAPAL------------------------ 60
           MARSS  DKLLMV+CL+  GHVVAVTGDGTNDAPAL                        
Sbjct: 724 MARSSPSDKLLMVKCLRLKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIV 783

Query: 61  ------------------------------------PLVVNFIDVVSSAKVHLTAVQLLW 115
                                                LV+NFI  +S+ +V LTAVQLLW
Sbjct: 784 ILDDNFASVATVLKWGRCVYNNIQKFIQFQLTVNVAALVINFIAAISAGEVPLTAVQLLW 843

[Close]

BLAST of Bhi06G001540 vs. TAIR 10
Match: AT4G29900.1 (autoinhibited Ca(2+)-ATPase 10 )

HSP 1 Score: 102.1 bits (253), Expect = 3.1e-22
Identity = 70/174 (40.23%), Postives = 86/174 (49.43%), Query Frame = 0


Query: 1   MARSSLFDKLLMVQCLKNLGHVVAVTGDGTNDAPAL------------------------ 60
           M RSS  DKLL+VQ LK  GHVVAVTGDGTNDAPAL                        
Sbjct: 762 MGRSSPNDKLLLVQSLKRRGHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKEKSDII 821

Query: 61  ------------------------------------PLVVNFIDVVSSAKVHLTAVQLLW 115
                                                LV+N +  +S+ +V LTAVQLLW
Sbjct: 822 ILDDNFESVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISAGEVPLTAVQLLW 881

[Close]

BLAST of Bhi06G001540 vs. TAIR 10
Match: AT5G57110.1 (autoinhibited Ca2+ -ATPase, isoform 8 )

HSP 1 Score: 101.7 bits (252), Expect = 4.1e-22
Identity = 69/174 (39.66%), Postives = 86/174 (49.43%), Query Frame = 0


Query: 1   MARSSLFDKLLMVQCLKNLGHVVAVTGDGTNDAPAL------------------------ 60
           M RSS  DKLL+VQ L+  GHVVAVTGDGTNDAPAL                        
Sbjct: 758 MGRSSPNDKLLLVQSLRRQGHVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESSDII 817

Query: 61  ------------------------------------PLVVNFIDVVSSAKVHLTAVQLLW 115
                                                LV+N +  +SS  V LTAVQLLW
Sbjct: 818 ILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISSGDVPLTAVQLLW 877

[Close]

BLAST of Bhi06G001540 vs. TAIR 10
Match: AT5G57110.2 (autoinhibited Ca2+ -ATPase, isoform 8 )

HSP 1 Score: 101.7 bits (252), Expect = 4.1e-22
Identity = 69/174 (39.66%), Postives = 86/174 (49.43%), Query Frame = 0


Query: 1   MARSSLFDKLLMVQCLKNLGHVVAVTGDGTNDAPAL------------------------ 60
           M RSS  DKLL+VQ L+  GHVVAVTGDGTNDAPAL                        
Sbjct: 758 MGRSSPNDKLLLVQSLRRQGHVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESSDII 817

Query: 61  ------------------------------------PLVVNFIDVVSSAKVHLTAVQLLW 115
                                                LV+N +  +SS  V LTAVQLLW
Sbjct: 818 ILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISSGDVPLTAVQLLW 877

[Close]

BLAST of Bhi06G001540 vs. ExPASy Swiss-Prot
Match: Q9LIK7 (Putative calcium-transporting ATPase 13, plasma membrane-type OS=Arabidopsis thaliana OX=3702 GN=ACA13 PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.5e-26
Identity = 76/174 (43.68%), Postives = 91/174 (52.30%), Query Frame = 0


Query: 1   MARSSLFDKLLMVQCLKNLGHVVAVTGDGTNDAPAL------------------------ 60
           MARSS FDKLLMV+CLK LGHVVAVTGDGTNDAPAL                        
Sbjct: 720 MARSSPFDKLLMVKCLKELGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIV 779

Query: 61  ------------------------------------PLVVNFIDVVSSAKVHLTAVQLLW 115
                                                LV+NF+  VS+  V LTAVQLLW
Sbjct: 780 ILDDNFASVATVLKWGRCVYNNIQKFIQFQLTVNVAALVINFVAAVSAGDVPLTAVQLLW 839

[Close]

BLAST of Bhi06G001540 vs. ExPASy Swiss-Prot
Match: Q9LY77 (Calcium-transporting ATPase 12, plasma membrane-type OS=Arabidopsis thaliana OX=3702 GN=ACA12 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.3e-22
Identity = 71/174 (40.80%), Postives = 89/174 (51.15%), Query Frame = 0


Query: 1   MARSSLFDKLLMVQCLKNLGHVVAVTGDGTNDAPAL------------------------ 60
           MARSS  DKLLMV+CL+  GHVVAVTGDGTNDAPAL                        
Sbjct: 724 MARSSPSDKLLMVKCLRLKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIV 783

Query: 61  ------------------------------------PLVVNFIDVVSSAKVHLTAVQLLW 115
                                                LV+NFI  +S+ +V LTAVQLLW
Sbjct: 784 ILDDNFASVATVLKWGRCVYNNIQKFIQFQLTVNVAALVINFIAAISAGEVPLTAVQLLW 843

[Close]

BLAST of Bhi06G001540 vs. ExPASy Swiss-Prot
Match: Q9SZR1 (Calcium-transporting ATPase 10, plasma membrane-type OS=Arabidopsis thaliana OX=3702 GN=ACA10 PE=1 SV=2)

HSP 1 Score: 102.1 bits (253), Expect = 4.4e-21
Identity = 70/174 (40.23%), Postives = 86/174 (49.43%), Query Frame = 0


Query: 1   MARSSLFDKLLMVQCLKNLGHVVAVTGDGTNDAPAL------------------------ 60
           M RSS  DKLL+VQ LK  GHVVAVTGDGTNDAPAL                        
Sbjct: 762 MGRSSPNDKLLLVQSLKRRGHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKEKSDII 821

Query: 61  ------------------------------------PLVVNFIDVVSSAKVHLTAVQLLW 115
                                                LV+N +  +S+ +V LTAVQLLW
Sbjct: 822 ILDDNFESVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISAGEVPLTAVQLLW 881

[Close]

BLAST of Bhi06G001540 vs. ExPASy Swiss-Prot
Match: Q9LF79 (Calcium-transporting ATPase 8, plasma membrane-type OS=Arabidopsis thaliana OX=3702 GN=ACA8 PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 5.7e-21
Identity = 69/174 (39.66%), Postives = 86/174 (49.43%), Query Frame = 0


Query: 1   MARSSLFDKLLMVQCLKNLGHVVAVTGDGTNDAPAL------------------------ 60
           M RSS  DKLL+VQ L+  GHVVAVTGDGTNDAPAL                        
Sbjct: 758 MGRSSPNDKLLLVQSLRRQGHVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESSDII 817

Query: 61  ------------------------------------PLVVNFIDVVSSAKVHLTAVQLLW 115
                                                LV+N +  +SS  V LTAVQLLW
Sbjct: 818 ILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISSGDVPLTAVQLLW 877

[Close]

BLAST of Bhi06G001540 vs. ExPASy Swiss-Prot
Match: Q7XEK4 (Calcium-transporting ATPase 7, plasma membrane-type OS=Oryza sativa subsp. japonica OX=39947 GN=ACA7 PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 8.3e-20
Identity = 67/174 (38.51%), Postives = 83/174 (47.70%), Query Frame = 0


Query: 1   MARSSLFDKLLMVQCLKNLGHVVAVTGDGTNDAPAL------------------------ 60
           MARS   DKL++VQ LK  GHVVAVTGDGTNDAPAL                        
Sbjct: 734 MARSLPLDKLVLVQRLKQKGHVVAVTGDGTNDAPALKEADVGLSMGVQGTEVAKESSDIV 793

Query: 61  ------------------------------------PLVVNFIDVVSSAKVHLTAVQLLW 115
                                                LV+NF+  V++ ++ LT VQLLW
Sbjct: 794 ILNDNFDTVVTATRWGRCVYNNIQKFIQFQLTVNVAALVINFVSAVTTGRMPLTTVQLLW 853

[Close]

BLAST of Bhi06G001540 vs. ExPASy TrEMBL
Match: A0A5D3D4E8 (Calcium-transporting ATPase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001370 PE=3 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 4.1e-30
Identity = 93/174 (53.45%), Postives = 97/174 (55.75%), Query Frame = 0


Query: 1   MARSSLFDKLLMVQCLKNLGHVVAVTGDGTNDAPAL------------------------ 60
           MARSS FDKLLMVQCLKNLGHVVAVTGDGTNDAPAL                        
Sbjct: 722 MARSSPFDKLLMVQCLKNLGHVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIV 781

Query: 61  ------------------------------------PLVVNFIDVVSSAKVHLTAVQLLW 115
                                                LVVNFI  VSS KV LTAVQLLW
Sbjct: 782 ILDDNFTSVVTVLKWGRCVYNNIQKFIQFQLTVNVAALVVNFIAAVSSGKVSLTAVQLLW 841

[Close]

BLAST of Bhi06G001540 vs. ExPASy TrEMBL
Match: A0A1S3C230 (Calcium-transporting ATPase OS=Cucumis melo OX=3656 GN=LOC103495964 PE=3 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 4.1e-30
Identity = 93/174 (53.45%), Postives = 97/174 (55.75%), Query Frame = 0


Query: 1   MARSSLFDKLLMVQCLKNLGHVVAVTGDGTNDAPAL------------------------ 60
           MARSS FDKLLMVQCLKNLGHVVAVTGDGTNDAPAL                        
Sbjct: 722 MARSSPFDKLLMVQCLKNLGHVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIV 781

Query: 61  ------------------------------------PLVVNFIDVVSSAKVHLTAVQLLW 115
                                                LVVNFI  VSS KV LTAVQLLW
Sbjct: 782 ILDDNFTSVVTVLKWGRCVYNNIQKFIQFQLTVNVAALVVNFIAAVSSGKVSLTAVQLLW 841

[Close]

BLAST of Bhi06G001540 vs. ExPASy TrEMBL
Match: A0A0A0LLD4 (Calcium-transporting ATPase OS=Cucumis sativus OX=3659 GN=Csa_2G011490 PE=3 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.6e-29
Identity = 92/174 (52.87%), Postives = 96/174 (55.17%), Query Frame = 0


Query: 1   MARSSLFDKLLMVQCLKNLGHVVAVTGDGTNDAPAL------------------------ 60
           MARSS FDKLLMVQCLKNLGHVVAVTGDGTNDAPAL                        
Sbjct: 724 MARSSPFDKLLMVQCLKNLGHVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIV 783

Query: 61  ------------------------------------PLVVNFIDVVSSAKVHLTAVQLLW 115
                                                LVVNFI  VSS KV LTAVQLLW
Sbjct: 784 ILDDNFTSVVTVLKWGRCVYNNIQKFIQFQLTVNVAALVVNFIAAVSSGKVSLTAVQLLW 843

[Close]

BLAST of Bhi06G001540 vs. ExPASy TrEMBL
Match: A0A6J1HRB2 (Calcium-transporting ATPase OS=Cucurbita maxima OX=3661 GN=LOC111465421 PE=3 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 2.7e-29
Identity = 89/174 (51.15%), Postives = 97/174 (55.75%), Query Frame = 0


Query: 1   MARSSLFDKLLMVQCLKNLGHVVAVTGDGTNDAPAL------------------------ 60
           MARSS FDKLLMVQCLKN GHVVAVTGDGTNDAPAL                        
Sbjct: 731 MARSSPFDKLLMVQCLKNQGHVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIV 790

Query: 61  ------------------------------------PLVVNFIDVVSSAKVHLTAVQLLW 115
                                                LV+NFI  VSS KV LTAVQLLW
Sbjct: 791 ILDDNFTSVVTVLKWGRCVYNNIQKFIQFQLTVNIAALVINFIAAVSSGKVPLTAVQLLW 850

[Close]

BLAST of Bhi06G001540 vs. ExPASy TrEMBL
Match: A0A6J1CNU2 (Calcium-transporting ATPase OS=Momordica charantia OX=3673 GN=LOC111012979 PE=3 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 4.5e-29
Identity = 91/174 (52.30%), Postives = 97/174 (55.75%), Query Frame = 0


Query: 1   MARSSLFDKLLMVQCLKNLGHVVAVTGDGTNDAPAL------------------------ 60
           MARSS FDKLLMVQCLKN GHVVAVTGDGTNDAPAL                        
Sbjct: 731 MARSSPFDKLLMVQCLKNQGHVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIV 790

Query: 61  ------------------------------------PLVVNFIDVVSSAKVHLTAVQLLW 115
                                                LVVNFI  VSS KV LTAVQLLW
Sbjct: 791 ILDDNFTSVVTVLKWGRCVYNNIQKFIQFQLTVNVAALVVNFIAAVSSGKVPLTAVQLLW 850

The following BLAST results are available for this feature:

BLAST of Bhi06G001540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22910.1	2.5e-27	43.68	ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family p...	[more]
AT3G63380.1	1.7e-23	40.80	ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family p...	[more]
AT4G29900.1	3.1e-22	40.23	autoinhibited Ca(2+)-ATPase 10	[more]
AT5G57110.1	4.1e-22	39.66	autoinhibited Ca2+ -ATPase, isoform 8	[more]
AT5G57110.2	4.1e-22	39.66	autoinhibited Ca2+ -ATPase, isoform 8	[more]

BLAST of Bhi06G001540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LIK7	3.5e-26	43.68	Putative calcium-transporting ATPase 13, plasma membrane-type OS=Arabidopsis tha...	[more]
Q9LY77	2.3e-22	40.80	Calcium-transporting ATPase 12, plasma membrane-type OS=Arabidopsis thaliana OX=...	[more]
Q9SZR1	4.4e-21	40.23	Calcium-transporting ATPase 10, plasma membrane-type OS=Arabidopsis thaliana OX=...	[more]
Q9LF79	5.7e-21	39.66	Calcium-transporting ATPase 8, plasma membrane-type OS=Arabidopsis thaliana OX=3...	[more]
Q7XEK4	8.3e-20	38.51	Calcium-transporting ATPase 7, plasma membrane-type OS=Oryza sativa subsp. japon...	[more]

BLAST of Bhi06G001540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D4E8	4.1e-30	53.45	Calcium-transporting ATPase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3C230	4.1e-30	53.45	Calcium-transporting ATPase OS=Cucumis melo OX=3656 GN=LOC103495964 PE=3 SV=1	[more]
A0A0A0LLD4	1.6e-29	52.87	Calcium-transporting ATPase OS=Cucumis sativus OX=3659 GN=Csa_2G011490 PE=3 SV=1	[more]
A0A6J1HRB2	2.7e-29	51.15	Calcium-transporting ATPase OS=Cucurbita maxima OX=3661 GN=LOC111465421 PE=3 SV=...	[more]
A0A6J1CNU2	4.5e-29	52.30	Calcium-transporting ATPase OS=Momordica charantia OX=3673 GN=LOC111012979 PE=3 ...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006068	Cation-transporting P-type ATPase, C-terminal	PFAM	PF00689	Cation_ATPase_C	coord: 53..111 e-value: 8.0E-10 score: 38.7
None	No IPR available	GENE3D	1.20.1110.10		coord: 36..114 e-value: 1.1E-13 score: 52.5
None	No IPR available	PANTHER	PTHR24093:SF471	CALCIUM-TRANSPORTING ATPASE	coord: 1..36
None	No IPR available	PANTHER	PTHR24093:SF471	CALCIUM-TRANSPORTING ATPASE	coord: 38..112
None	No IPR available	PANTHER	PTHR24093	CATION TRANSPORTING ATPASE	coord: 38..112 coord: 1..36
IPR023214	HAD superfamily	GENE3D	3.40.50.1000		coord: 1..35 e-value: 2.6E-9 score: 39.4
IPR023298	P-type ATPase, transmembrane domain superfamily	SUPERFAMILY	81665	Calcium ATPase, transmembrane domain M	coord: 45..112
IPR036412	HAD-like superfamily	SUPERFAMILY	56784	HAD-like	coord: 3..66

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi06M001540	Bhi06M001540	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006811	ion transport
cellular_component	GO:0016020	membrane