Bhi06G001539 (gene) Wax gourd (B227) v1

Overview


Name	Bhi06G001539
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Transcription factor bHLH66-like
Location	chr6: 50511435 .. 50514738 (+)
RNA-Seq Expression	Bhi06G001539
Synteny	Bhi06G001539

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTTCGAGACGTCAGCAGGTTGGCGGTGCCATGCCGCCATCCTTCCTTCTACCGATTTTTCCACTGAGGTACTCCAATATTACTAAAATTACAATTTTAGTTTTACATTCCTATCTTATTATAATTTGATTCCTTTGAGTCATCAGATATAAATCGAAAGTTATATTTAAATGTTCCTATTTGTTTGTCTACTTTTTATGATATTTTCAAAAATCAAGTCAATTTTTTAAAAAATAAAAAATTTACTTTTTTTGTTTTTTAATTTGACAAGAATTAAACTTTGTACTTAAAAATATGCAAATCATTATAAGGAATGGAGAGTAAGTTGATTTACCAAACACGACTTTAAGATTTCATTTCTATATATCTAGTAGCTACATTAATTTTTAAAAAGGATTTGAATTCATCAGCACCTTATCAAGACAAAATTAAAAGTTAAGTTAAATCTTATTAACATACAATTAAAGACCAAATAATGCAATCATCAAAGTTCAATTAGTTATAATAACTATCATGATTGACTTGGTATAGATATAAGAGATCAAATAAAGATAATAACATAGTGGTCACTCTACTGGATTTAATATTAAGTGTTTCATTGACACTCAAATGATGTAGGTTAGGGATTTGTCCAGTAAAGATTGGTCAGAGTGTATAATGGACTAAAGAAAAAAGTCAAGGTCTAAATTAGTAATTTAACAAACATATTCTATTGTCAAATGGTTCTTAAAATTTTGAAAGTGAATGAGTACATTTTACTTTTTTATCCATACTTTTTTTTTTTTTTTGTTAAGGTCATGAAAAGGATAGGTATAGGACCCATTGAAACTACTTAGGTGAAGAAATTCAACTCTCCAACAGAAAACTTCACACACAACACAACCATCATCATTCATCATGGAAAAGGACGTTGGGATAATCCTTATTCATGATTCCTAATAACAGATTTCATCATCAATATTATTATCCTTATAAGATTCATTGATTTACGTATCACCTAATTGCTTACAATTTTGTTTTCTCTATCAATATCTTAAAAAGTGCTTTAAGAAAAGTAGCATCTCTCAACGAATATCCAAAAGGAAAAAACTAGGTTAAATATAGGCTGTAGTGATCTTATGATTTTTTTCCCTAACTGGTTTATATATTTTTGTAAACAATGTATAATTTTATTTCAAGGCCTTATTGTTACAAACATTAAAATTAGATTAAAACATATTGTTATATATAAAGTGAATAACGTTGTATTATTATAGATTCAAAATACTGTAGGTTTAATATGTATCAGAGTTATAGTTGGTTAGTGTATGGATAAAAAAGAAATATATGGCTTATATATATGAGTTTGGTTGATATTATATATAAAGAGACGATATTATGGATGTGTAGGGTATGTGTTGTGTTGGATTGGAAGTTTGAAAAAGAATAGGAGAATAAAAAGTTAGCTAATGTAGGAAACAAGCAGGAAGAAACAAAGAAAGAGGTCTTACAGTCCACATTCACATCCACTCACTCTGCCTTTTCTTCATTGTCCATTCCTTTCTTTCTAGTCACTCATACATTCTACTTTTCCTTTCTTATATTGCATCACAAGAAAATTAATTATATACTTCCTCTACTCCATGAGAATTTAGGGCTTTTAACGAGTGTGATATTGACTTGAAACAGTGAAGTTTTGTTTGGGAGTACTATTTTCATTTGAGGTCACTATTATATTATTTTAGATTTTTTTTTTTCAATAATATCTAACCGAATTTTTCCTCCAAAAGAAGTTTTGAAACATTATTTAGATAGGATCAGAATAATATTTCAACTTATGATAGATAACTTTCGGAACAAACCAAAAGTTCAATGGAATATTTTGGTAACTTAACCTTATTTTTAGATCAGATTACAAAAAAAAAAAAAAGAAAGACCTAAACTTTGACGTTTGTTTTAAAAATATTCATATTCTTTCAAAATTACTTATTATTTTGTCATTTTTATATCAGTATATAAACTAGTATTCTGTTAGAATTTGTATAGAAATTAGGACGAGAATAATGGTAGGGCGATGTTTCGATCCCATTTTTTGTTTCATATTACCACACTTCTAATGTATTTTTACTCCAAGTTTGTTTTGAAAGCTTTATGAAAGGTAATATTACAATTTCGGAGTATTTTATTATTATTATTATTTTATTTTTTAATTTAGTTTTACTCTTAAAAATTTTAGTTCAATTATAATATAGGTTATATACTGATATAACATCCTCGTGTTTTTAGGGTGGCACTGAGTGTAACCAGTCCAACGGAACCGGTGGAGCCGGCGGACAGACTTCGGCTGAAGCTCCGTCGAGTAATGACGCAATGACGGTGACGGAGGACCAGGTGGTGAAGTTAATGGAGGAGGATATGGGCTCCGCCATGCAGTACTTACAAGGCAAAGGCCTCTGCCTCATGCCCATCTCTCTCGCCAGCGCTATCTCCGCCGCCACGTGTCCCAGCCGCCCAATGACGGCAACGAAGGGCAGAGGAGATGCTCCCACCTCTCCCAGCTTATCGGCGTTGACTGTTCAGTCAACTGCCTTGGGTAACGGTACCGTCGACAGAACCGTCGGAGACTCTGTCTCCGTTTCACGGCCGCCGTGAGTTAACGGCAAGTTTATTGACCTGGTAAGCAAATGCCCACTAAAGTCTAAGAAAATATGGCTCCTCCTCTTTAGTTTCTAAATACGACGCCGTATTTGCTTAGCCTTTAGTAGGAAAAAAAAACCTTTACTTTACATTGAATATCTTTTTTTCCCTCTCTCTCTCTCTCTCTCTCTCTCTAACTTGTTTTCGATGTATATTCCCTTTTTTGTTTAATGAAAAATTATTGTTTGTCATGATGGAATTAAATAAAATATTGGGTAATACTTAATGGCCTTAATTAAAAATGATTATGATTAACCGTAAGACAATCCTTTTGTGTGGTCCATATATGAAGATTAAACAACATAATTTGATTAATTTAGTAAGTTTTGGTTGGTGTTTGTTTCTTGATTTAAGATGTAGATTAGGACTTAAGTCAACCCTCTACAATGATTCTCATTGATTTGTTCGATTTAAATAAAAGAAGCTGACGTGTTTTCATATGATACATCATTGTTTAAGACTTAACTTTAATTATGAAAGCTTCAACTAATTTTGATTCCATTTTAAATAGTTCGACTTTGACTTTAGTTATGAAAGGTTGCATTCATAAGGACTTAGTATTTGTTATTATCATCATCTCAGGAAAAAAAGAAAAAAAGTTCTGAGGCGTTGGTTCCAATCTAATATA

mRNA sequence

CGTTCGAGACGTCAGCAGGTTGGCGGTGCCATGCCGCCATCCTTCCTTCTACCGATTTTTCCACTGAGGGTGGCACTGAGTGTAACCAGTCCAACGGAACCGGTGGAGCCGGCGGACAGACTTCGGCTGAAGCTCCGTCGAGTAATGACGCAATGACGGTGACGGAGGACCAGGTGGTGAAGTTAATGGAGGAGGATATGGGCTCCGCCATGCAGTACTTACAAGGCAAAGGCCTCTGCCTCATGCCCATCTCTCTCGCCAGCGCTATCTCCGCCGCCACGTGTCCCAGCCGCCCAATGACGGCAACGAAGGGCAGAGGAGATGCTCCCACCTCTCCCAGCTTATCGGCGTTGACTGTTCAGTCAACTGCCTTGGGTAACGGTACCGTCGACAGAACCGTCGGAGACTCTGTCTCCGTTTCACGGCCGCCGTGAGTTAACGGCAAGTTTATTGACCTGGTAAGCAAATGCCCACTAAAGTCTAAGAAAATATGGCTCCTCCTCTTTAGTTTCTAAATACGACGCCGTATTTGCTTAGCCTTTAGTAGGAAAAAAAAACCTTTACTTTACATTGAATATCTTTTTTTCCCTCTCTCTCTCTCTCTCTCTCTCTCTAACTTGTTTTCGATGTATATTCCCTTTTTTGTTTAATGAAAAATTATTGTTTGTCATGATGGAATTAAATAAAATATTGGGTAATACTTAATGGCCTTAATTAAAAATGATTATGATTAACCGTAAGACAATCCTTTTGTGTGGTCCATATATGAAGATTAAACAACATAATTTGATTAATTTAGTAAGTTTTGGTTGGTGTTTGTTTCTTGATTTAAGATGTAGATTAGGACTTAAGTCAACCCTCTACAATGATTCTCATTGATTTGTTCGATTTAAATAAAAGAAGCTGACGTGTTTTCATATGATACATCATTGTTTAAGACTTAACTTTAATTATGAAAGCTTCAACTAATTTTGATTCCATTTTAAATAGTTCGACTTTGACTTTAGTTATGAAAGGTTGCATTCATAAGGACTTAGTATTTGTTATTATCATCATCTCAGGAAAAAAAGAAAAAAAGTTCTGAGGCGTTGGTTCCAATCTAATATA

Coding sequence (CDS)

TTCGAGACGTCAGCAGGTTGGCGGTGCCATGCCGCCATCCTTCCTTCTACCGATTTTTCCACTGAGGGTGGCACTGAGTGTAACCAGTCCAACGGAACCGGTGGAGCCGGCGGACAGACTTCGGCTGAAGCTCCGTCGAGTAATGACGCAATGACGGTGACGGAGGACCAGGTGGTGAAGTTAATGGAGGAGGATATGGGCTCCGCCATGCAGTACTTACAAGGCAAAGGCCTCTGCCTCATGCCCATCTCTCTCGCCAGCGCTATCTCCGCCGCCACGTGTCCCAGCCGCCCAATGACGGCAACGAAGGGCAGAGGAGATGCTCCCACCTCTCCCAGCTTATCGGCGTTGACTGTTCAGTCAACTGCCTTGGGTAACGGTACCGTCGACAGAACCGTCGGAGACTCTGTCTCCGTTTCACGGCCGCCGTGA

Protein sequence

FETSAGWRCHAAILPSTDFSTEGGTECNQSNGTGGAGGQTSAEAPSSNDAMTVTEDQVVKLMEEDMGSAMQYLQGKGLCLMPISLASAISAATCPSRPMTATKGRGDAPTSPSLSALTVQSTALGNGTVDRTVGDSVSVSRPP

Homology

[Close]

BLAST of Bhi06G001539 vs. TAIR 10
Match: AT2G24260.1 (LJRHL1-like 1 )

HSP 1 Score: 100.5 bits (249), Expect = 1.1e-21
Identity = 74/150 (49.33%), Postives = 92/150 (61.33%), Query Frame = 0


Query: 8   RCHAAILPSTDFSTEGGTECNQSNGTGGAGGQTSAEAPSSNDAMTVTEDQVVKLMEEDMG 67
           R   A   S+  S  GG+  N S+   G G QT   A +SND++T+TE QV KLMEEDMG
Sbjct: 204 RLGGAASVSSQISEAGGSHGNASSAMVG-GSQT---AGNSNDSVTMTEHQVAKLMEEDMG 263

Query: 68  SAMQYLQGKGLCLMPISLASAISAATCPSRPMTATKGRGD--APTSPSLSALTVQSTAL- 127
           SAMQYLQGKGLCLMPISLA+AIS ATC SR         D   P+ P+LS +T+QST+  
Sbjct: 264 SAMQYLQGKGLCLMPISLATAISTATCHSRNPLIPGAVADVGGPSPPNLSGMTIQSTSTK 323

Query: 128 ---------GNGTVDRT----VGDSVSVSR 142
                    GNG  +R+    V ++VSVS+
Sbjct: 324 MGSGNGKLNGNGVTERSSSIAVKEAVSVSK 349

[Close]

BLAST of Bhi06G001539 vs. TAIR 10
Match: AT4G30980.1 (LJRHL1-like 2 )

HSP 1 Score: 91.7 bits (226), Expect = 5.3e-19
Identity = 68/121 (56.20%), Postives = 76/121 (62.81%), Query Frame = 0


Query: 23  GGTECNQSNGTGGAGGQTSAEAPSSNDAMTVTEDQVVKLMEEDMGSAMQYLQGKGLCLMP 82
           GG     S  +  AGG  S E  SS+    +TE QV KLMEEDMGSAMQYLQGKGLCLMP
Sbjct: 198 GGAASASSQISEDAGG--SHENTSSSGEAKMTEHQVAKLMEEDMGSAMQYLQGKGLCLMP 257

Query: 83  ISLASAISAATCPSR-PMTATKGRGDAPTSPSLSALTVQSTALGNGTVDRTVGDSVSVSR 142
           ISLA+ IS ATCPSR P     G    P SP+LS   V   A GNG+   TV D+ SVS+
Sbjct: 258 ISLATTISTATCPSRSPFVKDTG---VPLSPNLSTTIV---ANGNGSSLVTVKDAPSVSK 310

[Close]

BLAST of Bhi06G001539 vs. TAIR 10
Match: AT5G58010.1 (LJRHL1-like 3 )

HSP 1 Score: 76.6 bits (187), Expect = 1.8e-14
Identity = 57/117 (48.72%), Postives = 73/117 (62.39%), Query Frame = 0


Query: 27  CNQSNGTGGAGGQTSAEAPSSNDAMTVTEDQVVKLMEEDMGSAMQYLQGKGLCLMPISLA 86
           CN  NG G A G       SSN+++  TE +V KLMEEDMGSAMQYLQGKGLCLMPISLA
Sbjct: 194 CNGLNGNGNATG-------SSNESLRSTEQRVAKLMEEDMGSAMQYLQGKGLCLMPISLA 253

Query: 87  SAISAATCPSRPMTATKGRGDAPTSPSLSA--LTVQSTALGNGTVDRTVGDSVSVSR 142
           +AIS++T      T ++G    P S +++A    V +TA+       T+ D VS S+
Sbjct: 254 TAISSST------THSRGSLFNPISSAVAAEDSNVTATAVAAPEASSTM-DDVSASK 296

[Close]

BLAST of Bhi06G001539 vs. TAIR 10
Match: AT4G02590.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 51.6 bits (122), Expect = 6.1e-07
Identity = 34/57 (59.65%), Postives = 39/57 (68.42%), Query Frame = 0


Query: 35  GAGGQTSAEA--PSSNDAMTVTEDQVVKLMEEDMGSAMQYLQGKGLCLMPISLASAI 90
           G GG+T   A    SND    TE QV KLMEE++G+AMQ LQ K LC+MPISLA AI
Sbjct: 237 GEGGRTPQPAWEKWSNDG---TERQVAKLMEENVGAAMQLLQSKALCMMPISLAMAI 290

[Close]

BLAST of Bhi06G001539 vs. TAIR 10
Match: AT4G02590.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 51.6 bits (122), Expect = 6.1e-07
Identity = 34/57 (59.65%), Postives = 39/57 (68.42%), Query Frame = 0


Query: 35  GAGGQTSAEA--PSSNDAMTVTEDQVVKLMEEDMGSAMQYLQGKGLCLMPISLASAI 90
           G GG+T   A    SND    TE QV KLMEE++G+AMQ LQ K LC+MPISLA AI
Sbjct: 237 GEGGRTPQPAWEKWSNDG---TERQVAKLMEENVGAAMQLLQSKALCMMPISLAMAI 290

[Close]

BLAST of Bhi06G001539 vs. ExPASy Swiss-Prot
Match: D0PX88 (bHLH transcription factor RHL1 OS=Lotus japonicus OX=34305 GN=RHL1 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 3.8e-22
Identity = 76/148 (51.35%), Postives = 92/148 (62.16%), Query Frame = 0


Query: 11  AAILP-STDFSTEGGTECNQSN-GTGGAGG----QTSAEAPSSNDAMTVTEDQVVKLMEE 70
           AA+ P   D S+EGG      +  T GAGG     T+  A ++ND++T+TE QV KLMEE
Sbjct: 245 AAVAPLVADISSEGGGGGGGGDCVTNGAGGVLPRSTTTAASTTNDSLTMTEHQVAKLMEE 304

Query: 71  DMGSAMQYLQGKGLCLMPISLASAISAATCPSRP----------MTATKGRGDAPTSPSL 130
           DMGSAMQYLQGKGLCLMPISLA+AIS ATC +R             A    G+ P+SP++
Sbjct: 305 DMGSAMQYLQGKGLCLMPISLATAISTATCHTRSPLIPNNLANLAAAAASNGEGPSSPNM 364

Query: 131 SALTVQSTALGNGTVDRTVGDSVSVSRP 143
           S LTVQS   GN   D TV D   VS+P
Sbjct: 365 SVLTVQSAVAGN---DSTVKD---VSKP 386

[Close]

BLAST of Bhi06G001539 vs. ExPASy Swiss-Prot
Match: Q9ZUG9 (Transcription factor LRL1 OS=Arabidopsis thaliana OX=3702 GN=LRL1 PE=1 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.6e-20
Identity = 74/150 (49.33%), Postives = 92/150 (61.33%), Query Frame = 0


Query: 8   RCHAAILPSTDFSTEGGTECNQSNGTGGAGGQTSAEAPSSNDAMTVTEDQVVKLMEEDMG 67
           R   A   S+  S  GG+  N S+   G G QT   A +SND++T+TE QV KLMEEDMG
Sbjct: 204 RLGGAASVSSQISEAGGSHGNASSAMVG-GSQT---AGNSNDSVTMTEHQVAKLMEEDMG 263

Query: 68  SAMQYLQGKGLCLMPISLASAISAATCPSRPMTATKGRGD--APTSPSLSALTVQSTAL- 127
           SAMQYLQGKGLCLMPISLA+AIS ATC SR         D   P+ P+LS +T+QST+  
Sbjct: 264 SAMQYLQGKGLCLMPISLATAISTATCHSRNPLIPGAVADVGGPSPPNLSGMTIQSTSTK 323

Query: 128 ---------GNGTVDRT----VGDSVSVSR 142
                    GNG  +R+    V ++VSVS+
Sbjct: 324 MGSGNGKLNGNGVTERSSSIAVKEAVSVSK 349

[Close]

BLAST of Bhi06G001539 vs. ExPASy Swiss-Prot
Match: Q8S3D5 (Transcription factor LRL2 OS=Arabidopsis thaliana OX=3702 GN=LRL2 PE=2 SV=2)

HSP 1 Score: 91.7 bits (226), Expect = 7.4e-18
Identity = 68/121 (56.20%), Postives = 76/121 (62.81%), Query Frame = 0


Query: 23  GGTECNQSNGTGGAGGQTSAEAPSSNDAMTVTEDQVVKLMEEDMGSAMQYLQGKGLCLMP 82
           GG     S  +  AGG  S E  SS+    +TE QV KLMEEDMGSAMQYLQGKGLCLMP
Sbjct: 198 GGAASASSQISEDAGG--SHENTSSSGEAKMTEHQVAKLMEEDMGSAMQYLQGKGLCLMP 257

Query: 83  ISLASAISAATCPSR-PMTATKGRGDAPTSPSLSALTVQSTALGNGTVDRTVGDSVSVSR 142
           ISLA+ IS ATCPSR P     G    P SP+LS   V   A GNG+   TV D+ SVS+
Sbjct: 258 ISLATTISTATCPSRSPFVKDTG---VPLSPNLSTTIV---ANGNGSSLVTVKDAPSVSK 310

[Close]

BLAST of Bhi06G001539 vs. ExPASy Swiss-Prot
Match: Q9LSQ3 (Transcription factor LRL3 OS=Arabidopsis thaliana OX=3702 GN=LRL3 PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.5e-13
Identity = 57/117 (48.72%), Postives = 73/117 (62.39%), Query Frame = 0


Query: 27  CNQSNGTGGAGGQTSAEAPSSNDAMTVTEDQVVKLMEEDMGSAMQYLQGKGLCLMPISLA 86
           CN  NG G A G       SSN+++  TE +V KLMEEDMGSAMQYLQGKGLCLMPISLA
Sbjct: 194 CNGLNGNGNATG-------SSNESLRSTEQRVAKLMEEDMGSAMQYLQGKGLCLMPISLA 253

Query: 87  SAISAATCPSRPMTATKGRGDAPTSPSLSA--LTVQSTALGNGTVDRTVGDSVSVSR 142
           +AIS++T      T ++G    P S +++A    V +TA+       T+ D VS S+
Sbjct: 254 TAISSST------THSRGSLFNPISSAVAAEDSNVTATAVAAPEASSTM-DDVSASK 296

[Close]

BLAST of Bhi06G001539 vs. ExPASy Swiss-Prot
Match: O22768 (Transcription factor UNE12 OS=Arabidopsis thaliana OX=3702 GN=UNE12 PE=1 SV=2)

HSP 1 Score: 51.6 bits (122), Expect = 8.5e-06
Identity = 34/57 (59.65%), Postives = 39/57 (68.42%), Query Frame = 0


Query: 35  GAGGQTSAEA--PSSNDAMTVTEDQVVKLMEEDMGSAMQYLQGKGLCLMPISLASAI 90
           G GG+T   A    SND    TE QV KLMEE++G+AMQ LQ K LC+MPISLA AI
Sbjct: 237 GEGGRTPQPAWEKWSNDG---TERQVAKLMEENVGAAMQLLQSKALCMMPISLAMAI 290

[Close]

BLAST of Bhi06G001539 vs. ExPASy TrEMBL
Match: A0A0A0LFE4 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G009480 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 1.2e-47
Identity = 110/133 (82.71%), Postives = 117/133 (87.97%), Query Frame = 0


Query: 12  AILPS--TDFSTEGGTECNQSNGTGGAGGQTSAEAPSSNDAMTVTEDQVVKLMEEDMGSA 71
           A +PS   D STEGGTECNQSNGT GA GQTS  APSSNDAMTVTE QVVKLMEEDMGSA
Sbjct: 289 AAMPSRLPDLSTEGGTECNQSNGTNGASGQTSTGAPSSNDAMTVTEHQVVKLMEEDMGSA 348

Query: 72  MQYLQGKGLCLMPISLASAISAATCPSRPMTATKGRGDAPTSPSLSALTVQSTALGNGTV 131
           MQYLQGKGLCLMPISLA+AIS ATC SRP+TA+KG GD PTSPSLSALTVQSTALGNGTV
Sbjct: 349 MQYLQGKGLCLMPISLATAISTATCHSRPITASKGGGDPPTSPSLSALTVQSTALGNGTV 408

Query: 132 DRTVGDSVSVSRP 143
           D+ V D++SVSRP
Sbjct: 409 DKPVRDTLSVSRP 421

[Close]

BLAST of Bhi06G001539 vs. ExPASy TrEMBL
Match: A0A5A7V5Q2 (Transcription factor bHLH66-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold329G00700 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.7e-47
Identity = 109/133 (81.95%), Postives = 117/133 (87.97%), Query Frame = 0


Query: 12  AILPS--TDFSTEGGTECNQSNGTGGAGGQTSAEAPSSNDAMTVTEDQVVKLMEEDMGSA 71
           A +PS   D STEGGTECNQSNGT GAGGQTS  APSS+DAMTVTE QVVKLMEEDMGSA
Sbjct: 293 AAMPSRLPDLSTEGGTECNQSNGTNGAGGQTSTGAPSSDDAMTVTEHQVVKLMEEDMGSA 352

Query: 72  MQYLQGKGLCLMPISLASAISAATCPSRPMTATKGRGDAPTSPSLSALTVQSTALGNGTV 131
           MQYLQGKGLCLMPISLA+AIS ATC SRP+TA+KG GD PTSPSLSALTVQSTALGN TV
Sbjct: 353 MQYLQGKGLCLMPISLATAISTATCHSRPITASKGGGDPPTSPSLSALTVQSTALGNATV 412

Query: 132 DRTVGDSVSVSRP 143
           D+ + DS+SVSRP
Sbjct: 413 DKPIRDSLSVSRP 425

[Close]

BLAST of Bhi06G001539 vs. ExPASy TrEMBL
Match: A0A5D3BI83 (Transcription factor bHLH66-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G001030 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.7e-47
Identity = 109/133 (81.95%), Postives = 117/133 (87.97%), Query Frame = 0


Query: 12  AILPS--TDFSTEGGTECNQSNGTGGAGGQTSAEAPSSNDAMTVTEDQVVKLMEEDMGSA 71
           A +PS   D STEGGTECNQSNGT GAGGQTS  APSS+DAMTVTE QVVKLMEEDMGSA
Sbjct: 260 AAMPSRLPDLSTEGGTECNQSNGTNGAGGQTSTGAPSSDDAMTVTEHQVVKLMEEDMGSA 319

Query: 72  MQYLQGKGLCLMPISLASAISAATCPSRPMTATKGRGDAPTSPSLSALTVQSTALGNGTV 131
           MQYLQGKGLCLMPISLA+AIS ATC SRP+TA+KG GD PTSPSLSALTVQSTALGN TV
Sbjct: 320 MQYLQGKGLCLMPISLATAISTATCHSRPITASKGGGDPPTSPSLSALTVQSTALGNATV 379

Query: 132 DRTVGDSVSVSRP 143
           D+ + DS+SVSRP
Sbjct: 380 DKPIRDSLSVSRP 392

[Close]

BLAST of Bhi06G001539 vs. ExPASy TrEMBL
Match: A0A6J1KH22 (transcription factor bHLH69-like OS=Cucurbita maxima OX=3661 GN=LOC111493801 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 4.3e-45
Identity = 106/133 (79.70%), Postives = 115/133 (86.47%), Query Frame = 0


Query: 12  AILPS--TDFSTEGGTECNQSNGTGGAGGQTSAEAPSSNDAMTVTEDQVVKLMEEDMGSA 71
           A +PS   D ST+GGT+CN SN TGGA GQTSA AP+SNDAM +TE+QVVKLMEEDMGSA
Sbjct: 286 AAMPSLLPDSSTQGGTDCNLSNETGGAVGQTSAGAPTSNDAMAITENQVVKLMEEDMGSA 345

Query: 72  MQYLQGKGLCLMPISLASAISAATCPSRPMTATKGRGDAPTSPSLSALTVQSTALGNGTV 131
           MQYLQGKGLCLMPISLA+AISAATC SRP+T +KG GDAPTSPSLSALT QST LGNGTV
Sbjct: 346 MQYLQGKGLCLMPISLATAISAATCHSRPITTSKGGGDAPTSPSLSALTSQSTVLGNGTV 405

Query: 132 DRTVGDSVSVSRP 143
           DR V DS SVSRP
Sbjct: 406 DRAVRDSASVSRP 418

[Close]

BLAST of Bhi06G001539 vs. ExPASy TrEMBL
Match: A0A6J1G4B7 (transcription factor bHLH69-like OS=Cucurbita moschata OX=3662 GN=LOC111450664 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 2.8e-44
Identity = 105/133 (78.95%), Postives = 114/133 (85.71%), Query Frame = 0


Query: 12  AILPS--TDFSTEGGTECNQSNGTGGAGGQTSAEAPSSNDAMTVTEDQVVKLMEEDMGSA 71
           A +PS   D ST+ GT+CN SN TGGA GQTSA AP+SNDAM +TE+QVVKLMEEDMGSA
Sbjct: 286 AAMPSLLPDSSTQDGTDCNLSNETGGAVGQTSAGAPTSNDAMAITENQVVKLMEEDMGSA 345

Query: 72  MQYLQGKGLCLMPISLASAISAATCPSRPMTATKGRGDAPTSPSLSALTVQSTALGNGTV 131
           MQYLQGKGLCLMPISLA+AISAATC SRP+T +KG GDAPTSPSLSALT QST LGNGTV
Sbjct: 346 MQYLQGKGLCLMPISLATAISAATCHSRPITTSKGGGDAPTSPSLSALTSQSTVLGNGTV 405

Query: 132 DRTVGDSVSVSRP 143
           DR V DS SVSRP
Sbjct: 406 DRAVRDSASVSRP 418

The following BLAST results are available for this feature:

BLAST of Bhi06G001539 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G24260.1	1.1e-21	49.33	LJRHL1-like 1	[more]
AT4G30980.1	5.3e-19	56.20	LJRHL1-like 2	[more]
AT5G58010.1	1.8e-14	48.72	LJRHL1-like 3	[more]
AT4G02590.1	6.1e-07	59.65	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G02590.2	6.1e-07	59.65	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

BLAST of Bhi06G001539 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
D0PX88	3.8e-22	51.35	bHLH transcription factor RHL1 OS=Lotus japonicus OX=34305 GN=RHL1 PE=2 SV=1	[more]
Q9ZUG9	1.6e-20	49.33	Transcription factor LRL1 OS=Arabidopsis thaliana OX=3702 GN=LRL1 PE=1 SV=1	[more]
Q8S3D5	7.4e-18	56.20	Transcription factor LRL2 OS=Arabidopsis thaliana OX=3702 GN=LRL2 PE=2 SV=2	[more]
Q9LSQ3	2.5e-13	48.72	Transcription factor LRL3 OS=Arabidopsis thaliana OX=3702 GN=LRL3 PE=2 SV=1	[more]
O22768	8.5e-06	59.65	Transcription factor UNE12 OS=Arabidopsis thaliana OX=3702 GN=UNE12 PE=1 SV=2	[more]

BLAST of Bhi06G001539 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LFE4	1.2e-47	82.71	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G009480 PE=4 S...	[more]
A0A5A7V5Q2	2.7e-47	81.95	Transcription factor bHLH66-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A5D3BI83	2.7e-47	81.95	Transcription factor bHLH66-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A6J1KH22	4.3e-45	79.70	transcription factor bHLH69-like OS=Cucurbita maxima OX=3661 GN=LOC111493801 PE=...	[more]
A0A6J1G4B7	2.8e-44	78.95	transcription factor bHLH69-like OS=Cucurbita moschata OX=3662 GN=LOC111450664 P...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..143
None	No IPR available	PANTHER	PTHR16223	TRANSCRIPTION FACTOR BHLH83-RELATED	coord: 40..104
None	No IPR available	PANTHER	PTHR16223:SF120	TRANSCRIPTION FACTOR BHLH69	coord: 40..104

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi06M001539	Bhi06M001539	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding