Bhi06G001478 (gene) Wax gourd (B227) v1

Overview
NameBhi06G001478
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionNB-ARC domain-containing protein
Locationchr6: 48689038 .. 48689282 (-)
RNA-Seq ExpressionBhi06G001478
SyntenyBhi06G001478
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAGAGGAGCCTTATTACTTATAGTGTTGGATGATATGCGGGAGGGACTTGATTTAGAAACTGTCGGAATTCTTTATGGGGAAGATCACGAAGGATATGTAAGATACTTGTCACTTCAAGACATCACAATGTATATCCCTAATAATTTTGAGGTGAAGTTTCTTAATGAAGAAGGATCGTGGTCTTTCTTCAAAAGCTTGGTAGGTGAATCACTTGAACCAATCTTGAAGTCTGCAGCATATGAG

mRNA sequence

GAAGAGGAGCCTTATTACTTATAGTGTTGGATGATATGCGGGAGGGACTTGATTTAGAAACTGTCGGAATTCTTTATGGGGAAGATCACGAAGGATATGTAAGATACTTGTCACTTCAAGACATCACAATGTATATCCCTAATAATTTTGAGGTGAAGTTTCTTAATGAAGAAGGATCGTGGTCTTTCTTCAAAAGCTTGGTAGGTGAATCACTTGAACCAATCTTGAAGTCTGCAGCATATGAG

Coding sequence (CDS)

GAAGAGGAGCCTTATTACTTATAGTGTTGGATGATATGCGGGAGGGACTTGATTTAGAAACTGTCGGAATTCTTTATGGGGAAGATCACGAAGGATATGTAAGATACTTGTCACTTCAAGACATCACAATGTATATCCCTAATAATTTTGAGGTGAAGTTTCTTAATGAAGAAGGATCGTGGTCTTTCTTCAAAAGCTTGGTAGGTGAATCACTTGAACCAATCTTGAAGTCTGCAGCATATGAG

Protein sequence

RGALLLIVLDDMREGLDLETVGILYGEDHEGYVRYLSLQDITMYIPNNFEVKFLNEEGSWSFFKSLVGESLEPILKSAAYE
Homology
[Close]
BLAST of Bhi06G001478 vs. ExPASy TrEMBL
Match: A0A6J1KDH0 (probable disease resistance protein At4g27220 OS=Cucurbita maxima OX=3661 GN=LOC111493908 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 6.1e-12
Identity = 49/83 (59.04%), Postives = 55/83 (66.27%), Query Frame = 0 

Query: 5   LLIVLDDMREGLDLETVGILYGEDHEG-----YVRYLSLQDITMYIPNNFEVKFLNEEGS 64
           +L+VLDDM E LDLETVGI YGED E        R+  +    M I N FEVKFLNEE S
Sbjct: 253 ILVVLDDMWEELDLETVGIPYGEDRERCKILITSRHHHVLYNKMSIRNTFEVKFLNEEES 312

Query: 65  WSFFKSLVGESLE-PILKSAAYE 82
           W+FFKS  GESLE  +LKS A E
Sbjct: 313 WNFFKSKAGESLEISVLKSVASE 335

[Close]
BLAST of Bhi06G001478 vs. ExPASy TrEMBL
Match: A0A2H5QM76 (NB-ARC domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_243270 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.0e-06
Identity = 36/82 (43.90%), Postives = 51/82 (62.20%), Query Frame = 0 

Query: 5   LLIVLDDMREGLDLETVGILYGEDHEGYVRYLSLQD----ITMYIPNNFEVKFLNEEGSW 64
           +L+VLDD+ + LDLETVGI +GEDH+G    L+ +D    + M   +NF +  LNEE  W
Sbjct: 254 ILVVLDDIWKHLDLETVGIPFGEDHKGCKLLLTARDLRDLLKMGSKDNFLISNLNEEEDW 313

Query: 65  SFFKSLVGESLE-PILKSAAYE 82
             FK + G+ +E   LKS A +
Sbjct: 314 RLFKMMAGDDVENRELKSTAID 335

[Close]
BLAST of Bhi06G001478 vs. ExPASy TrEMBL
Match: A0A2H5QM78 (NB-ARC domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_243270 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.0e-06
Identity = 36/82 (43.90%), Postives = 51/82 (62.20%), Query Frame = 0 

Query: 5   LLIVLDDMREGLDLETVGILYGEDHEGYVRYLSLQD----ITMYIPNNFEVKFLNEEGSW 64
           +L+VLDD+ + LDLETVGI +GEDH+G    L+ +D    + M   +NF +  LNEE  W
Sbjct: 254 ILVVLDDIWKHLDLETVGIPFGEDHKGCKLLLTARDLRDLLKMGSKDNFLISNLNEEEDW 313

Query: 65  SFFKSLVGESLE-PILKSAAYE 82
             FK + G+ +E   LKS A +
Sbjct: 314 RLFKMMAGDDVENRELKSTAID 335

[Close]
BLAST of Bhi06G001478 vs. ExPASy TrEMBL
Match: A0A2H5QM88 (NB-ARC domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_243270 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.0e-06
Identity = 36/82 (43.90%), Postives = 51/82 (62.20%), Query Frame = 0 

Query: 5   LLIVLDDMREGLDLETVGILYGEDHEGYVRYLSLQD----ITMYIPNNFEVKFLNEEGSW 64
           +L+VLDD+ + LDLETVGI +GEDH+G    L+ +D    + M   +NF +  LNEE  W
Sbjct: 254 ILVVLDDIWKHLDLETVGIPFGEDHKGCKLLLTARDLRDLLKMGSKDNFLISNLNEEEDW 313

Query: 65  SFFKSLVGESLE-PILKSAAYE 82
             FK + G+ +E   LKS A +
Sbjct: 314 RLFKMMAGDDVENRELKSTAID 335

[Close]
BLAST of Bhi06G001478 vs. ExPASy TrEMBL
Match: A0A2H5QN81 (NB-ARC domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_243270 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.0e-06
Identity = 36/82 (43.90%), Postives = 51/82 (62.20%), Query Frame = 0 

Query: 5   LLIVLDDMREGLDLETVGILYGEDHEGYVRYLSLQD----ITMYIPNNFEVKFLNEEGSW 64
           +L+VLDD+ + LDLETVGI +GEDH+G    L+ +D    + M   +NF +  LNEE  W
Sbjct: 254 ILVVLDDIWKHLDLETVGIPFGEDHKGCKLLLTARDLRDLLKMGSKDNFLISNLNEEEDW 313

Query: 65  SFFKSLVGESLE-PILKSAAYE 82
             FK + G+ +E   LKS A +
Sbjct: 314 RLFKMMAGDDVENRELKSTAID 335

The following BLAST results are available for this feature:
BLAST of Bhi06G001478 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi06G001478 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi06G001478 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1KDH06.1e-1259.04probable disease resistance protein At4g27220 OS=Cucurbita maxima OX=3661 GN=LOC... [more]
A0A2H5QM761.0e-0643.90NB-ARC domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_243270 PE=4 S... [more]
A0A2H5QM781.0e-0643.90NB-ARC domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_243270 PE=4 S... [more]
A0A2H5QM881.0e-0643.90NB-ARC domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_243270 PE=4 S... [more]
A0A2H5QN811.0e-0643.90NB-ARC domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_243270 PE=4 S... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi06M001478Bhi06M001478mRNA