Bhi06G001320 (gene) Wax gourd (B227) v1

Overview


Name	Bhi06G001320
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Signal anchor, putative
Location	chr6: 44558570 .. 44558782 (+)
RNA-Seq Expression	Bhi06G001320
Synteny	Bhi06G001320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGTCTTTGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCAACTTCCTTGACCTTCCGACACTGGGCAGGCGTCAGCCCCCATACATG

mRNA sequence

ATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGTCTTTGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCAACTTCCTTGACCTTCCGACACTGGGCAGGCGTCAGCCCCCATACATG

Coding sequence (CDS)

ATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGTCTTTGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCAACTTCCTTGACCTTCCGACACTGGGCAGGCGTCAGCCCCCATACATG

Protein sequence

MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTVFVHRGFGRRLPCHQVTNFLDLPTLGRRQPPYM

Homology

[Close]

BLAST of Bhi06G001320 vs. ExPASy Swiss-Prot
Match: Q3BAI2 (Uncharacterized protein ORF91 OS=Phalaenopsis aphrodite subsp. formosana OX=308872 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 4.3e-35
Identity = 67/71 (94.37%), Postives = 68/71 (95.77%), Query Frame = 0


Query: 1  MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTVFVHRGFGRRLPCHQVTNFLDL 60
          MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTV+VT  VHRGFGRRLPCHQVTNFLDL
Sbjct: 10 MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVLVTAAVHRGFGRRLPCHQVTNFLDL 69

Query: 61 PTLGRRQPPYM 72
          P LGRRQPPYM
Sbjct: 70 PALGRRQPPYM 80

[Close]

BLAST of Bhi06G001320 vs. ExPASy TrEMBL
Match: A0A6J5XMM5 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS18512 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 9.4e-33
Identity = 68/71 (95.77%), Postives = 68/71 (95.77%), Query Frame = 0


Query: 1  MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTVFVHRGFGRRLPCHQVTNFLDL 60
          MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVT  VHRGFGRRLPCHQVTNFLDL
Sbjct: 1  MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCHQVTNFLDL 60

Query: 61 PTLGRRQPPYM 72
          P LGRRQPPYM
Sbjct: 61 PALGRRQPPYM 71

[Close]

BLAST of Bhi06G001320 vs. ExPASy TrEMBL
Match: A0A5N6N5S8 (Uncharacterized protein OS=Mikania micrantha OX=192012 GN=E3N88_25331 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 9.4e-33
Identity = 68/71 (95.77%), Postives = 68/71 (95.77%), Query Frame = 0


Query: 1   MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTVFVHRGFGRRLPCHQVTNFLDL 60
           MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVT  VHRGFGRRLPCHQVTNFLDL
Sbjct: 311 MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCHQVTNFLDL 370

Query: 61  PTLGRRQPPYM 72
           P LGRRQPPYM
Sbjct: 371 PALGRRQPPYM 381

[Close]

BLAST of Bhi06G001320 vs. ExPASy TrEMBL
Match: A0A2G2W356 (Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_18514 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 9.4e-33
Identity = 68/71 (95.77%), Postives = 68/71 (95.77%), Query Frame = 0


Query: 1  MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTVFVHRGFGRRLPCHQVTNFLDL 60
          MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVT  VHRGFGRRLPCHQVTNFLDL
Sbjct: 1  MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCHQVTNFLDL 60

Query: 61 PTLGRRQPPYM 72
          P LGRRQPPYM
Sbjct: 61 PALGRRQPPYM 71

[Close]

BLAST of Bhi06G001320 vs. ExPASy TrEMBL
Match: A0A0S3R736 (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G442300 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 9.4e-33
Identity = 68/71 (95.77%), Postives = 68/71 (95.77%), Query Frame = 0


Query: 1  MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTVFVHRGFGRRLPCHQVTNFLDL 60
          MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVT  VHRGFGRRLPCHQVTNFLDL
Sbjct: 1  MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCHQVTNFLDL 60

Query: 61 PTLGRRQPPYM 72
          P LGRRQPPYM
Sbjct: 61 PALGRRQPPYM 71

[Close]

BLAST of Bhi06G001320 vs. ExPASy TrEMBL
Match: A0A0V0HWL8 (Putative ovule protein (Fragment) OS=Solanum chacoense OX=4108 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 9.4e-33
Identity = 68/71 (95.77%), Postives = 68/71 (95.77%), Query Frame = 0


Query: 1  MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTVFVHRGFGRRLPCHQVTNFLDL 60
          MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVT  VHRGFGRRLPCHQVTNFLDL
Sbjct: 1  MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCHQVTNFLDL 60

Query: 61 PTLGRRQPPYM 72
          P LGRRQPPYM
Sbjct: 61 PALGRRQPPYM 71

The following BLAST results are available for this feature:

BLAST of Bhi06G001320 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi06G001320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3BAI2	4.3e-35	94.37	Uncharacterized protein ORF91 OS=Phalaenopsis aphrodite subsp. formosana OX=3088...	[more]

BLAST of Bhi06G001320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J5XMM5	9.4e-33	95.77	Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS18512 PE=4 S...	[more]
A0A5N6N5S8	9.4e-33	95.77	Uncharacterized protein OS=Mikania micrantha OX=192012 GN=E3N88_25331 PE=4 SV=1	[more]
A0A2G2W356	9.4e-33	95.77	Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_18514 PE=4 SV=1	[more]
A0A0S3R736	9.4e-33	95.77	Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G...	[more]
A0A0V0HWL8	9.4e-33	95.77	Putative ovule protein (Fragment) OS=Solanum chacoense OX=4108 PE=4 SV=1	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi06M001320	Bhi06M001320	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast