Bhi06G001093 (gene) Wax gourd (B227) v1

Overview
NameBhi06G001093
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
Descriptionmediator of RNA polymerase II transcription subunit 22b-like
Locationchr6: 36454313 .. 36462098 (-)
RNA-Seq ExpressionBhi06G001093
SyntenyBhi06G001093
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTATCCAATGTAATTGAGTAATAATTTGTCAAACTCAAAAAGATATAACTCATCAAATTTATTACCGATTAATTTTAATAGAATTGTCACTTCAAATTATATGAATCTTGTTATAGTCAAACTTTTAATACTTATTAATAACCAAACAACTTTAAATTATTTTTCAACTAAACTCAATCTCAAACTAGAAATAAAGATAAATTTAATTTTCTCAAGTCAAATTTGTAAATTAAACATATGTTTTCACTTCTTTCACATAAATTTGTAATGTAACAACATCAAACATCATAAAATGAATTTCATTCCAACATTTTAGTACACTTTTTTTCCTTCTATGATGACCTAGTTATTAGGTTAAAAGGTCACAAAGGTTTTCATAACTAATGTAAGGCAAACTGACAAGCGTAACTTGTTTTTGAATAATAAAAAAACAGAAAATAGAAAACAAACAACTAAGATCGCACCATTTATTAACTATACGGTTTTTTTTTTTTTGTTCTTAAAAATTAAGTCTATAGATACTTATTTTTATCTCTAACTTTCTTGTTAATATTTTTTTAGTAATGATTTAAAAAATTAAACCAAATTTAACCGTATAAGTGTGGGGGTTGATTTTCTCTTTTTGGTGGGCTAGGTTTTTGTAACAGCCCATTGAGCACCCTTATCCAAGCCCATCTCTATGTTTGAATTCCAATGATTGTCTAGGGTTGCATCTGCCTCTGTGGTGCGTCTTTGTAACGACGGCAACGCCGGTTATCTCCGACCACAGACGACAAGACCGCAGCTTCGACAAACTCTCAGCGACGACGTTTCCAGCAGCGGTTTTCTCCCTTTTTGACGAGGTTCGGTAAAGACCCACTCTCATTCAATCTCAGATTTAATGGCTTCAAATATGTAGGATTAAGCGTTTTCCGATACCAACCAGCAAGATTCGAGTCGTTTTGGGTTCATAGTAGTTTCCAAACTATTTGGTCACTTTCCAGCGACGATCCAAGTCGATATTGGGGAGTTTTAGGCGTCACAGCTCTATTTTAAAGGTGCTGTGAAATGATTTATAATCCTTGGAAACTCTTTGATCGTAGTTTGGACTTGATTCAAAGTGTTTGGATTGAGATTTAACGTTGCTTTGGTTAAGATTACACCTTGATTTTATTATTTTAGGAGGTTTTTTTCCCCTTTATAATTTTGAGAAAGATTGACTATTAGGATGCCTTTTAAATTTATTTTGTTTAAGAACTTTCTGGGAGTTGAAATCCTATTTTCGTTTTTAATTTTGTTGTGGTTTCCCTTGAATTTGGGTGGTTGTATAGACTAGGTTCTTTATTTTGTTTTGAGGATTGGTTTGAGTTTGACTTTAGTTTGAATTGGTTAGTTATGTTACATGTTAGAATTTGGAAAGTCTTGCTGAGCCTGGTTAGAAAGTGTTTTGAAGATTAGTTTTCTTGATTGGATTTGAAGTTAAAAACTTCAAATTGTTTATCTGGTGATCTGTAAGTTTGTAGTGTTTATGGTTTCGTTGTCATGTTGCCGAAATTTCTAAAGCATCATAGATAGTAGAGTTAGTCAAGGAGTAAAATTTGTCAATGTTCCCTAGTTTAGTTTTAAATTTGGAGGTGTTACATTCTTCTTCCCCAACGTTTCTAATTCTCTTTCTTTCCAATCACCTTGGTGCCATTGCAGAACTGATTCAATTCTCATTCTATTATTATGAACAAAGGCATTGGTGGTGGAATTGGCCCCACCGCGGCAGCTGCAGCGGCGGCAGCTCAGAAACAGAAACTGCTTCTCCAAAGAGTGGAAACCGATATAGCCAACATTGTTGACAATTTCACTCACCTTGTCAATGTCTCTAGGGTAACATTCTTCCCTTTGTCTTGTAATTCTCTTTGGTGGTCTATCTGCTTGATCTTCTTGATTGAATCATCACATGTTTGGAATTCTTAATTCAAACTTAGCCTTCTTCTTTCCTCAGGTGAATGATCCACCTGTTAGAAATTCACAGGAATCTTTCATGATGGAAATGCGTGCGGCCAGAATGGTAAGATAATAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCTTGTTAATATTTTTTTAGTAATGATTTAAAAAATTAAACCAAATTTAACCGTATAAGTGTGGGGGTTGATTTTCTCTTTTTGGTGGGCTAGGTTTTTGTAACAGCCCATTGAGCACCCTTATCCAAGCCCATCTCTATGTTTGAATTCCAATGATTGTCTAGGGTTGCATCTGCCTCTGTGGTGCGTCTTTGTAACGACGGCAACGCCGGTTATCTCCGACCACAGACGACAAGACCGCAGCTTCGACAAACTCTCAGCGACGACGTTTCCAGCAGCGGTTTTCTCCCTTTTTGACGAGGTTCGGTAAAGACCCACTCTCATTCAATCTCAGATTTAATGGCTTCAAATATGTAGGATTAAGCGTTTTCCGATACCAACCAGCAAGATTCGAGTCGTTTTGGGTTCATAGTAGTTTCCAAACTATTTGGTCACTTTCCAGCGACGATCCAAGTCGATATTGGGGAGTTTTAGGCGTCACAGCTCTATTTTAAAGGTGCTGTGAAATGATTTATAATCCTTGGAAACTCTTTGATCGTAGTTTGGACTTGATTCAAAGTGTTTGGATTGAGATTTAACGTTGCTTTGGTTAAGATTACACCTTGATTTTATTATTTTAGGAGGTTTTTTTCCCCTTTATAATTTTGAGAAAGATTGACTATTAGGATGCCTTTTAAATTTATTTTGTTTAAGAACTTTCTGGGAGTTGAAATCCTATTTTCGTTTTTAATTTTGTTGTGGTTTCCCTTGAATTTGGGTGGTTGTATAGACTAGGTTCTTTATTTTGTTTTGAGGATTGGTTTGAGTTTGACTTTAGTTTGAATTGGTTAGTTATGTTACATGTTAGAATTTGGAAAGTCTTGCTGAGCCTGGTTAGAAAGTGTTTTGAAGATTAGTTTTCTTGATTGGATTTGAAGTTAAAAACTTCAAATTGTTTATCTGGTGATCTGTAAGTTTGTAGTGTTTATGGTTTCGTTGTCATGTTGCCGAAATTTCTAAAGCATCATAGATAGTAGAGTTAGTCAAGGAGTAAAATTTGTCAATGTTCCCTAGTTTAGTTTTAAATTTGGAGGTGTTACATTCTTCTTCCCCAACGTTTCTAATTCTCTTTCTTTCCAATCACCTTGGTGCCATTGCAGAACTGATTCAATTCTCATTCTATTATTATGAACAAAGGCATTGGTGGTGGAATTGGCCCCACCGCGGCAGCTGCAGCGGCGGCAGCTCAGAAACAGAAACTGCTTCTCCAAAGAGTGGAAACCGATATAGCCAACATTGTTGACAATTTCACTCACCTTGTCAATGTCTCTAGGGTAACATTCTTCCCTTTGTCTTGTAATTCTCTTTGGTGGTCTATCTGCTTGATCTTCTTGATTGAATCATCACATGTTTGGAATTCTTAATTCAAACTTAGCCTTCTTCTTTCCTCAGGTGAATGATCCACCTGTTAGAAATTCACAGGAATCTTTCATGATGGAAATGCGTGCGGCCAGAATGGTAAGATAATAAAATTCCCTTCGCTTGTTTACTCTCTATGTATAGTTCCTTTCAAGTTAACTTCTGGATATAGATAGCTCTCTTATTCGTTCTACAATTGAATGATAATCATCTTATGAAGCCTTGATTTCTAGGGATAATAAAATTCCCTTCGCTTGTTTACTCTCTATGTATAGTACATCTCTTCCAGTAAGTAATTCTTCTCCTCTACCAGCATTCCCAAACACACTCTCTTCTTTAATTGAGGTGGTCTTCAATTTTATTATATCCCTCTTCAATCCTAATTCATTCTTCAGAAAAACTTAATTGAGCTACCTTTTAGCTAGAGCAATGGAAGTTACCTTGTTGAATACTAGATACCTTGGGGATCGTTCTAAAAGAAACAACACTGTAGAAATTCATTCAACATCACTGCCTTGATATGGTGTTAATTCATGATTCAAAGATTGCTGTTTTGACAAGAAATTCATCAAATCATTATGGAGCTCCAATGAAGTCGGTTGGATTTATGTTGAATCTATTGGGAGATTGGGTGGTTTACTGATTTTGTGGGATGATATAAAGATTAAACTTAAAGAAGGCTACGCTTTCTCTATTCAAATCCATTTTTAAAACAAGTCATTTTGTTGGGGCAACAAAGATTTATAGGCTAATTGACTATATAGAAAGAAAACATCTTTGGAGTGGAACCTGGACTCTATTCTCACATTGTGAAGATACCTTGGTGCATTGGAGGGGATTTAATTTAAATATAACCCTCTGGGTTCGTGAAAAATCACCATTAGGAAGACAAACCAAAGGTTGGGAGATCATTCATAACCATCTTTGATAGATAGGTTTTTTGTTTCTTGGGAATGTGATGAGTTATTCGACAATTGAAGGGTATTAAGACAAGCTGCTTTTTTTTTTTTTCTCTCTCTGATCATCCCTTACTCTCAGAAGCTGGATGCATTGTTTAGAGGGCACCCCCTATTAGATTTTGTAACAGTTTGATGCGAATGTCGGTTTGTGAGGTGAAGAACCATCGGGCAAACTTCTCTTCAGGACCATTATGGTTGGGCTGGCTATGTACTAGTTTTGAAGTTGAGAACTTTTCATAGATCGTCATGTCGTTGCATTTGCGAAATTTAGCTTGTGGTTAGGTCTTTTCTGGTGAAAGTATTTGGCCTGCTTTTACTAGTATTGGTTCTTGTTATCAGCTGCTGTGTTTGCTTTTCGAGGTTTTTCTGGAGTTGAGAATTGGTTTGATGAGCCTTTTTTGTTTCTTGGCTGTTCTCATTTGACTGTAATTGTTTTAAGATCTTGTTCTGTTTTCTCTTTTGTTTTTTTTTCCTCTTTTGGGAGTTTGTATCATTGAACATTTTCGAAATGATATGTTATTTCTTGTTCAAAATTTGCATTTTGGTTTCAAACTATCGAGGCTTCTTATATTCATAATGATCATTCACATATAAGATTATAGGCAATAATAAATCAGGGATTATCAGCTTGATATCGACAATTGCTTTTCATTATTATTGTTATGGCTCTACTATTATAGTGTTTTTCTACTTATTTCTTAATAGGTTCAGGCAGCTGATTCTCTGCTGAAGTTGGTTTCAGAACTTAAGCAGACAGCAATATTTTCTGGATTTGCTTCACTAAACGACCATGTGGAGCAAAGAATTGTGGAATTCAATCAGCAGGCACAACAGACTGACCGTCTTTTATCTACAATTGGTGAAGAAGCTGCTGCCAGCCTGAAGGAGCTTGAATCTCATTATTATTCTTCAACACAGAGAACTAGTCAGAACAACCTGACATGATTTGTAAGTTATGAATTAAGTAAATCAATGTTGTGATATTGTTGGCTTCTAATCTAAACTCACTTGTTTGCTAACCTGGATAATGAGACGTAAATGAACTCTTCTAGCCTATGTTCTTAGCATTCTTCTTTAGCTTTTATTATTACTAGCAGAAGGGTTTTTAGTCTTCTCTTACTCAACTCTTTAGGAGATTAGGATGGCAGAAGGGCTTGATAAGGATGTAAGACATTTATTAAGAAAATATGAACAATCAGGATTATTAGTGTTCAACTACGTTGTTGCTGAGGACTGTGAGCATGTGGTGGCAGAAATGGGTGAGCGTGAAAGCTCAAAATAACATAAACAAAAACTCATAGATTCATTGATGAATGTGCCAAATAGATTATACTTCTTGTACTCTGAACAATTTGAGAGACATTTTGGTCCCAATGTTTCAAAAATAGATTTCAAACAAGCAGAATAATCCTTCAAATTGGACTAGAATCAGGGGCAGAGACAATAAACCATCATAGACAGGTGACAAATTTTTAGAGATGGAACATTGTATGGTGCCTGCACTCCAAAATGTCTACTTCATAGTCATAAAATTGTTTAAAAATTGGTCTAGAATTAGGGGCAGTGACCAAATTTTACTTTTTGAACTTTATATAATCAACTTTTTGGGAGCCGAATTTTAAAATCTCGACTTTCATCATACCTTTTTAAAATAAGAAAAAACGTCCTAAGGGGTATTGTTAACAATTTTATGACTAAATAATTACTAAACAATATTATATGATTCTCAATAGGGCAGAAGTGGTTACCGAACATATTACTGTTTCTAGTTCTTAAAAAACAGGAAACAAAAATATTATCAAACGGGGCTTATATAACCTCTTTCTTTCCTATTGAGAATCATACTCTTTTAAAGATACTGATAAAATTTTGATGGGAAAACATAACTTGTTCCATAACTTCTTATCCTTGATCAAAGTTGTCATCTTCTTTGGCAGTTTGGTAGTGATCAAGATCCAAAACCATTACTTTGGCATTCATATACTATACTTTCTTTTTTACTTCTCTTGCATGATTTTGTGCAGCTGTTCATTTCTATCAGCTTGTCTAGCAGCCATTCCAGCTGCATTGAGAGTTCACAATCTCAACCAATTGGTTTCACTTAGCTCTGGTGGTTTCAGTGAGTGCATTTCCATGTGCCCTAATCTTCTTCATCCTGGTTGTGGTTGTGGCCTTATGTGCCCTTGAGAGCTTCGATCAAAGGCATTGACCACCTTGAATGGAGTTCTTGACAGGATTAAAGTTATAGCCTTCGACAAGATCGGGGCAATCAGTAAAGATGAATTTGTAGGAACTAATTTTCGAGCTTTACGAGATGTTATTAGCTTGCACAGCTTGATTCATTGGTAAATAGTAGCGTAAAAACATCACCAATTCCTAATGTTGATGGTGTTATCTTACATTTTTCAAAATTTTCACTAATGATTTTCATTTTCTTTAAATTTTAA

mRNA sequence

ATTATCCAATGTAATTGAGTAATAATTTGTCAAACTCAAAAAGATATAACTCATCAAATTTATTACCGATTAATTTTAATAGAATTGTCACTTCAAATTATATGAATCTTGTTATAGTCAAACTTTTAATACTTATTAATAACCAAACAACTTTAAATTATTTTTCAACTAAACTCAATCTCAAACTAGAAATAAAGATAAATTTAATTTTCTCAAGTCAAATTTGTAAATTAAACATATGTTTTCACTTCTTTCACATAAATTTGTAATGTAACAACATCAAACATCATAAAATGAATTTCATTCCAACATTTTAGTACACTTTTTTTCCTTCTATGATGACCTAGTTATTAGGTTAAAAGGTCACAAAGGTTTTCATAACTAATGTAAGGCAAACTGACAAGCGTAACTTGTTTTTGAATAATAAAAAAACAGAAAATAGAAAACAAACAACTAAGATCGCACCATTTATTAACTATACGGTTTTTTTTTTTTTGTTCTTAAAAATTAAGTCTATAGATACTTATTTTTATCTCTAACTTTCTTGTTAATATTTTTTTAGTAATGATTTAAAAAATTAAACCAAATTTAACCGTATAAGTGTGGGGGTTGATTTTCTCTTTTTGGTGGGCTAGGTTTTTGTAACAGCCCATTGAGCACCCTTATCCAAGCCCATCTCTATGTTTGAATTCCAATGATTGTCTAGGGTTGCATCTGCCTCTGTGGTGCGTCTTTGTAACGACGGCAACGCCGGTTATCTCCGACCACAGACGACAAGACCGCAGCTTCGACAAACTCTCAGCGACGACGTTTCCAGCAGCGGTTTTCTCCCTTTTTGACGAGGTTCGAACTGATTCAATTCTCATTCTATTATTATGAACAAAGGCATTGGTGGTGGAATTGGCCCCACCGCGGCAGCTGCAGCGGCGGCAGCTCAGAAACAGAAACTGCTTCTCCAAAGAGTGGAAACCGATATAGCCAACATTGTTGACAATTTCACTCACCTTGTCAATGTCTCTAGGGTGAATGATCCACCTGTTAGAAATTCACAGGAATCTTTCATGATGGAAATGCGTGCGGCCAGAATGGTTCAGGCAGCTGATTCTCTGCTGAAGTTGGTTTCAGAACTTAAGCAGACAGCAATATTTTCTGGATTTGCTTCACTAAACGACCATGTGGAGCAAAGAATTGTGGAATTCAATCAGCAGGCACAACAGACTGACCGTCTTTTATCTACAATTGGTGAAGAAGCTGCTGCCAGCCTGAAGGAGCTTGAATCTCATTATTATTCTTCAACACAGAGAACTAGTCAGAACAACCTGACATGATTTCTGTTCATTTCTATCAGCTTGTCTAGCAGCCATTCCAGCTGCATTGAGAGTTCACAATCTCAACCAATTGGTTTCACTTAGCTCTGGTGGTTTCAGTGAGTGCATTTCCATGTGCCCTAATCTTCTTCATCCTGGTTGTGGTTGTGGCCTTATGTGCCCTTGAGAGCTTCGATCAAAGGCATTGACCACCTTGAATGGAGTTCTTGACAGGATTAAAGTTATAGCCTTCGACAAGATCGGGGCAATCAGTAAAGATGAATTTGTAGGAACTAATTTTCGAGCTTTACGAGATGTTATTAGCTTGCACAGCTTGATTCATTGGTAAATAGTAGCGTAAAAACATCACCAATTCCTAATGTTGATGGTGTTATCTTACATTTTTCAAAATTTTCACTAATGATTTTCATTTTCTTTAAATTTTAA

Coding sequence (CDS)

ATGAACAAAGGCATTGGTGGTGGAATTGGCCCCACCGCGGCAGCTGCAGCGGCGGCAGCTCAGAAACAGAAACTGCTTCTCCAAAGAGTGGAAACCGATATAGCCAACATTGTTGACAATTTCACTCACCTTGTCAATGTCTCTAGGGTGAATGATCCACCTGTTAGAAATTCACAGGAATCTTTCATGATGGAAATGCGTGCGGCCAGAATGGTTCAGGCAGCTGATTCTCTGCTGAAGTTGGTTTCAGAACTTAAGCAGACAGCAATATTTTCTGGATTTGCTTCACTAAACGACCATGTGGAGCAAAGAATTGTGGAATTCAATCAGCAGGCACAACAGACTGACCGTCTTTTATCTACAATTGGTGAAGAAGCTGCTGCCAGCCTGAAGGAGCTTGAATCTCATTATTATTCTTCAACACAGAGAACTAGTCAGAACAACCTGACATGA

Protein sequence

MNKGIGGGIGPTAAAAAAAAQKQKLLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQAQQTDRLLSTIGEEAAASLKELESHYYSSTQRTSQNNLT
Homology
[Close]
BLAST of Bhi06G001093 vs. TAIR 10
Match: AT1G07950.1 (Surfeit locus protein 5 subunit 22 of Mediator complex )

HSP 1 Score: 213.4 bits (542), Expect = 1.3e-55
Identity = 112/140 (80.00%), Postives = 130/140 (92.86%), Query Frame = 0 

Query: 4   GIGGGIGPTAAAAAAAAQKQKLLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFM 63
           G GGG GPTAAAAAAA QKQK LLQRVETDI ++VDNFT +VNVSRV+DPPV+NSQE++M
Sbjct: 10  GSGGGSGPTAAAAAAALQKQKALLQRVETDITSVVDNFTQIVNVSRVSDPPVKNSQETYM 69

Query: 64  MEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQAQQTDRLLSTIG 123
           MEMRA+RMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRI EF+Q+A++T+RLL+ I 
Sbjct: 70  MEMRASRMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIEEFDQEAEKTNRLLARIA 129

Query: 124 EEAAASLKELESHYYSSTQR 144
           ++A+A+LKELESHYYSS QR
Sbjct: 130 DDASANLKELESHYYSSAQR 149

[Close]
BLAST of Bhi06G001093 vs. TAIR 10
Match: AT1G16430.1 (Surfeit locus protein 5 subunit 22 of Mediator complex )

HSP 1 Score: 210.7 bits (535), Expect = 8.2e-55
Identity = 111/147 (75.51%), Postives = 134/147 (91.16%), Query Frame = 0 

Query: 1   MNK--GIGGGIGPTAAAAAAAAQKQKLLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNS 60
           MNK  G GGG GPTAAAAAAA QKQK LLQRV+TDI ++VDNF  +VNV+RV+DPP++NS
Sbjct: 2   MNKGGGSGGGSGPTAAAAAAALQKQKALLQRVDTDITSVVDNFNQIVNVARVSDPPMKNS 61

Query: 61  QESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQAQQTDRL 120
           QE++MMEMRA+R+VQAADSLLKLVSELKQTAIFSGFASLNDHVEQRI EF+Q+A++T+RL
Sbjct: 62  QEAYMMEMRASRLVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIAEFDQEAEKTNRL 121

Query: 121 LSTIGEEAAASLKELESHYYSSTQRTS 146
           L+ I ++A+ASLKELESHYYSS QR++
Sbjct: 122 LARIADDASASLKELESHYYSSAQRST 148

[Close]
BLAST of Bhi06G001093 vs. ExPASy Swiss-Prot
Match: Q8LCH5 (Mediator of RNA polymerase II transcription subunit 22b OS=Arabidopsis thaliana OX=3702 GN=MED22B PE=1 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 1.8e-54
Identity = 112/140 (80.00%), Postives = 130/140 (92.86%), Query Frame = 0 

Query: 4   GIGGGIGPTAAAAAAAAQKQKLLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFM 63
           G GGG GPTAAAAAAA QKQK LLQRVETDI ++VDNFT +VNVSRV+DPPV+NSQE++M
Sbjct: 10  GSGGGSGPTAAAAAAALQKQKALLQRVETDITSVVDNFTQIVNVSRVSDPPVKNSQETYM 69

Query: 64  MEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQAQQTDRLLSTIG 123
           MEMRA+RMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRI EF+Q+A++T+RLL+ I 
Sbjct: 70  MEMRASRMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIEEFDQEAEKTNRLLARIA 129

Query: 124 EEAAASLKELESHYYSSTQR 144
           ++A+A+LKELESHYYSS QR
Sbjct: 130 DDASANLKELESHYYSSAQR 149

[Close]
BLAST of Bhi06G001093 vs. ExPASy Swiss-Prot
Match: Q9SA42 (Mediator of RNA polymerase II transcription subunit 22a OS=Arabidopsis thaliana OX=3702 GN=MED22A PE=1 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 1.2e-53
Identity = 111/147 (75.51%), Postives = 134/147 (91.16%), Query Frame = 0 

Query: 1   MNK--GIGGGIGPTAAAAAAAAQKQKLLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNS 60
           MNK  G GGG GPTAAAAAAA QKQK LLQRV+TDI ++VDNF  +VNV+RV+DPP++NS
Sbjct: 2   MNKGGGSGGGSGPTAAAAAAALQKQKALLQRVDTDITSVVDNFNQIVNVARVSDPPMKNS 61

Query: 61  QESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQAQQTDRL 120
           QE++MMEMRA+R+VQAADSLLKLVSELKQTAIFSGFASLNDHVEQRI EF+Q+A++T+RL
Sbjct: 62  QEAYMMEMRASRLVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIAEFDQEAEKTNRL 121

Query: 121 LSTIGEEAAASLKELESHYYSSTQRTS 146
           L+ I ++A+ASLKELESHYYSS QR++
Sbjct: 122 LARIADDASASLKELESHYYSSAQRST 148

[Close]
BLAST of Bhi06G001093 vs. ExPASy Swiss-Prot
Match: Q62276 (Mediator of RNA polymerase II transcription subunit 22 OS=Mus musculus OX=10090 GN=Med22 PE=1 SV=2)

HSP 1 Score: 83.6 bits (205), Expect = 2.1e-15
Identity = 51/144 (35.42%), Postives = 85/144 (59.03%), Query Frame = 0 

Query: 14  AAAAAAAQKQKLLLQ----RVETDIANIVDNFTHLVNVSRVNDP-----PVRNSQESFMM 73
           A   A  Q ++ LLQ    R++ DI +I+DNFT ++  +++ D        +  Q+++ M
Sbjct: 2   AQQRALPQSKETLLQSYNKRLKDDIKSIMDNFTEIIKTAKIEDETQVSRATQGEQDNYEM 61

Query: 74  EMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQAQQTDRLLSTIGE 133
            +RAA +V+A +SL+KLVS+LKQ  I + F S+N+ ++QR  +     ++ DR L T+ +
Sbjct: 62  HVRAANIVRAGESLMKLVSDLKQFLILNDFPSVNEAIDQRNQQLRALQEECDRKLITLRD 121

Query: 134 EAAASLKELESHYYSSTQRTSQNN 149
           E +  L ELE  YYSS+    + N
Sbjct: 122 EVSIDLYELEEEYYSSSSSLCEAN 145

[Close]
BLAST of Bhi06G001093 vs. ExPASy Swiss-Prot
Match: A0JPN6 (Mediator of RNA polymerase II transcription subunit 22 OS=Rattus norvegicus OX=10116 GN=Med22 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.1e-15
Identity = 51/144 (35.42%), Postives = 85/144 (59.03%), Query Frame = 0 

Query: 14  AAAAAAAQKQKLLLQ----RVETDIANIVDNFTHLVNVSRVNDP-----PVRNSQESFMM 73
           A   A  Q ++ LLQ    R++ DI +I+DNFT ++  +++ D        +  Q+++ M
Sbjct: 2   AQQRALPQSKETLLQSYNKRLKDDIKSIMDNFTEIIKTAKIEDETQVSRATQGEQDNYEM 61

Query: 74  EMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQAQQTDRLLSTIGE 133
            +RAA +V+A +SL+KLVS+LKQ  I + F S+N+ ++QR  +     ++ DR L T+ +
Sbjct: 62  HVRAANIVRAGESLMKLVSDLKQFLILNDFPSVNEAIDQRNQQLRALQEECDRKLITLRD 121

Query: 134 EAAASLKELESHYYSSTQRTSQNN 149
           E +  L ELE  YYSS+    + N
Sbjct: 122 EVSIDLYELEEEYYSSSSSLCEAN 145

[Close]
BLAST of Bhi06G001093 vs. ExPASy Swiss-Prot
Match: Q15528 (Mediator of RNA polymerase II transcription subunit 22 OS=Homo sapiens OX=9606 GN=MED22 PE=1 SV=2)

HSP 1 Score: 83.2 bits (204), Expect = 2.8e-15
Identity = 51/144 (35.42%), Postives = 85/144 (59.03%), Query Frame = 0 

Query: 14  AAAAAAAQKQKLLLQ----RVETDIANIVDNFTHLVNVSRVNDP-----PVRNSQESFMM 73
           A   A  Q ++ LLQ    R++ DI +I+DNFT ++  +++ D        +  Q+++ M
Sbjct: 2   AQQRALPQSKETLLQSYNKRLKDDIKSIMDNFTEIIKTAKIEDETQVSRATQGEQDNYEM 61

Query: 74  EMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQAQQTDRLLSTIGE 133
            +RAA +V+A +SL+KLVS+LKQ  I + F S+N+ ++QR  +     ++ DR L T+ +
Sbjct: 62  HVRAANIVRAGESLMKLVSDLKQFLILNDFPSVNEAIDQRNQQLRTLQEECDRKLITLRD 121

Query: 134 EAAASLKELESHYYSSTQRTSQNN 149
           E +  L ELE  YYSS+    + N
Sbjct: 122 EISIDLYELEEEYYSSSSSLCEAN 145

[Close]
BLAST of Bhi06G001093 vs. ExPASy TrEMBL
Match: A0A1S3C993 (mediator of RNA polymerase II transcription subunit 22b-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498265 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.0e-68
Identity = 145/150 (96.67%), Postives = 147/150 (98.00%), Query Frame = 0 

Query: 1   MNKGIGGGIGPTAAAAAAAAQKQKLLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQE 60
           MNKGIGGG GPTAAAAAAAAQKQKLLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQE
Sbjct: 1   MNKGIGGGTGPTAAAAAAAAQKQKLLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQE 60

Query: 61  SFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQAQQTDRLLS 120
           SFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQAQQT+RLLS
Sbjct: 61  SFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQAQQTERLLS 120

Query: 121 TIGEEAAASLKELESHYYSSTQRTSQNNLT 151
            IGEEAAA+LKELESHYYSSTQRT QNNLT
Sbjct: 121 RIGEEAAANLKELESHYYSSTQRTDQNNLT 150

[Close]
BLAST of Bhi06G001093 vs. ExPASy TrEMBL
Match: A0A5A7TMC4 (Mediator of RNA polymerase II transcription subunit 22a-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G00280 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.0e-68
Identity = 145/150 (96.67%), Postives = 147/150 (98.00%), Query Frame = 0 

Query: 1   MNKGIGGGIGPTAAAAAAAAQKQKLLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQE 60
           MNKGIGGG GPTAAAAAAAAQKQKLLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQE
Sbjct: 48  MNKGIGGGTGPTAAAAAAAAQKQKLLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQE 107

Query: 61  SFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQAQQTDRLLS 120
           SFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQAQQT+RLLS
Sbjct: 108 SFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQAQQTERLLS 167

Query: 121 TIGEEAAASLKELESHYYSSTQRTSQNNLT 151
            IGEEAAA+LKELESHYYSSTQRT QNNLT
Sbjct: 168 RIGEEAAANLKELESHYYSSTQRTDQNNLT 197

[Close]
BLAST of Bhi06G001093 vs. ExPASy TrEMBL
Match: A0A1S3CAG5 (mediator of RNA polymerase II transcription subunit 22a-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498265 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.0e-68
Identity = 145/150 (96.67%), Postives = 147/150 (98.00%), Query Frame = 0 

Query: 1   MNKGIGGGIGPTAAAAAAAAQKQKLLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQE 60
           MNKGIGGG GPTAAAAAAAAQKQKLLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQE
Sbjct: 48  MNKGIGGGTGPTAAAAAAAAQKQKLLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQE 107

Query: 61  SFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQAQQTDRLLS 120
           SFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQAQQT+RLLS
Sbjct: 108 SFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQAQQTERLLS 167

Query: 121 TIGEEAAASLKELESHYYSSTQRTSQNNLT 151
            IGEEAAA+LKELESHYYSSTQRT QNNLT
Sbjct: 168 RIGEEAAANLKELESHYYSSTQRTDQNNLT 197

[Close]
BLAST of Bhi06G001093 vs. ExPASy TrEMBL
Match: A0A0A0M174 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G701970 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.3e-68
Identity = 145/150 (96.67%), Postives = 147/150 (98.00%), Query Frame = 0 

Query: 1   MNKGIGGGIGPTAAAAAAAAQKQKLLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQE 60
           MNKGIGGG GPTAAAAAAAAQKQKLLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQE
Sbjct: 1   MNKGIGGGTGPTAAAAAAAAQKQKLLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQE 60

Query: 61  SFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQAQQTDRLLS 120
           SFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQAQQTDRLLS
Sbjct: 61  SFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQAQQTDRLLS 120

Query: 121 TIGEEAAASLKELESHYYSSTQRTSQNNLT 151
            IGEEAAA+LKELESHYYSSTQRT QN+LT
Sbjct: 121 RIGEEAAANLKELESHYYSSTQRTDQNSLT 150

[Close]
BLAST of Bhi06G001093 vs. ExPASy TrEMBL
Match: A0A6J1DR20 (mediator of RNA polymerase II transcription subunit 22b-like OS=Momordica charantia OX=3673 GN=LOC111022360 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 1.9e-67
Identity = 143/150 (95.33%), Postives = 146/150 (97.33%), Query Frame = 0 

Query: 1   MNKGIGGGIGPTAAAAAAAAQKQKLLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQE 60
           MNKG+GGG GPTAAAAAAAAQKQK+LLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQE
Sbjct: 1   MNKGVGGGNGPTAAAAAAAAQKQKVLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQE 60

Query: 61  SFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQAQQTDRLLS 120
           SFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQA+QTDRLLS
Sbjct: 61  SFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQAEQTDRLLS 120

Query: 121 TIGEEAAASLKELESHYYSSTQRTSQNNLT 151
            IGEEAA SLKELESHYYSSTQRTSQN LT
Sbjct: 121 RIGEEAATSLKELESHYYSSTQRTSQNILT 150

The following BLAST results are available for this feature:
BLAST of Bhi06G001093 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G07950.11.3e-5580.00Surfeit locus protein 5 subunit 22 of Mediator complex [more]
AT1G16430.18.2e-5575.51Surfeit locus protein 5 subunit 22 of Mediator complex [more]
BLAST of Bhi06G001093 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8LCH51.8e-5480.00Mediator of RNA polymerase II transcription subunit 22b OS=Arabidopsis thaliana ... [more]
Q9SA421.2e-5375.51Mediator of RNA polymerase II transcription subunit 22a OS=Arabidopsis thaliana ... [more]
Q622762.1e-1535.42Mediator of RNA polymerase II transcription subunit 22 OS=Mus musculus OX=10090 ... [more]
A0JPN62.1e-1535.42Mediator of RNA polymerase II transcription subunit 22 OS=Rattus norvegicus OX=1... [more]
Q155282.8e-1535.42Mediator of RNA polymerase II transcription subunit 22 OS=Homo sapiens OX=9606 G... [more]
BLAST of Bhi06G001093 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3C9931.0e-6896.67mediator of RNA polymerase II transcription subunit 22b-like isoform X2 OS=Cucum... [more]
A0A5A7TMC41.0e-6896.67Mediator of RNA polymerase II transcription subunit 22a-like isoform X1 OS=Cucum... [more]
A0A1S3CAG51.0e-6896.67mediator of RNA polymerase II transcription subunit 22a-like isoform X1 OS=Cucum... [more]
A0A0A0M1741.3e-6896.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G701970 PE=4 SV=1[more]
A0A6J1DR201.9e-6795.33mediator of RNA polymerase II transcription subunit 22b-like OS=Momordica charan... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009332Mediator of RNA polymerase II transcription subunit 22PFAMPF06179Med22coord: 28..127
e-value: 2.5E-28
score: 98.4
IPR009332Mediator of RNA polymerase II transcription subunit 22PANTHERPTHR12434MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 22coord: 1..147

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi06M001093Bhi06M001093mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0006357 regulation of transcription by RNA polymerase II
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0016592 mediator complex
cellular_component GO:0030008 TRAPP complex
molecular_function GO:0003712 transcription coregulator activity