Bhi06G001091 (gene) Wax gourd (B227) v1

Overview
NameBhi06G001091
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionDefensin-like protein
Locationchr6: 36386379 .. 36386717 (+)
RNA-Seq ExpressionBhi06G001091
SyntenyBhi06G001091
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCCCGGTGGCGGGAAAACAGAGGATATGCAAGGAAGGGCTAGGGTTGTGTGGAAAGGACTGTGATGCGAGGTGTAAAGCAAGACATAGCCCATCAGAGAACCCTCATGGCAGCTGTGACCGAATCGGGAACGTGTTGCTATGTGAATGCCTTTACAATTGTGGCGCAACACCGATGCCGAAGCCGAAATTTTGCACCATCGGGTTAGGACAGTGCAGCTACCAGTGCAAGAGCGATTGTTGTAATGCTAAATGTGGAAGTCAGTACAGAAACGGGGAGGGCTACTGCGACACCAACGTTGGAGTTTCTTTGTGCCAATGTGTCTATCCTTGCTAA

mRNA sequence

ATGACCCCGGTGGCGGGAAAACAGAGGATATGCAAGGAAGGGCTAGGGTTGTGTGGAAAGGACTGTGATGCGAGGTGTAAAGCAAGACATAGCCCATCAGAGAACCCTCATGGCAGCTGTGACCGAATCGGGAACGTGTTGCTATGTGAATGCCTTTACAATTGTGGCGCAACACCGATGCCGAAGCCGAAATTTTGCACCATCGGGTTAGGACAGTGCAGCTACCAGTGCAAGAGCGATTGTTGTAATGCTAAATGTGGAAGTCAGTACAGAAACGGGGAGGGCTACTGCGACACCAACGTTGGAGTTTCTTTGTGCCAATGTGTCTATCCTTGCTAA

Coding sequence (CDS)

ATGACCCCGGTGGCGGGAAAACAGAGGATATGCAAGGAAGGGCTAGGGTTGTGTGGAAAGGACTGTGATGCGAGGTGTAAAGCAAGACATAGCCCATCAGAGAACCCTCATGGCAGCTGTGACCGAATCGGGAACGTGTTGCTATGTGAATGCCTTTACAATTGTGGCGCAACACCGATGCCGAAGCCGAAATTTTGCACCATCGGGTTAGGACAGTGCAGCTACCAGTGCAAGAGCGATTGTTGTAATGCTAAATGTGGAAGTCAGTACAGAAACGGGGAGGGCTACTGCGACACCAACGTTGGAGTTTCTTTGTGCCAATGTGTCTATCCTTGCTAA

Protein sequence

MTPVAGKQRICKEGLGLCGKDCDARCKARHSPSENPHGSCDRIGNVLLCECLYNCGATPMPKPKFCTIGLGQCSYQCKSDCCNAKCGSQYRNGEGYCDTNVGVSLCQCVYPC
Homology
BLAST of Bhi06G001091 vs. TAIR 10
Match: AT5G38330.1 (low-molecular-weight cysteine-rich 80 )

HSP 1 Score: 101.3 bits (251), Expect = 5.2e-22
Identity = 48/103 (46.60%), Postives = 54/103 (52.43%), Query Frame = 0

Query: 10  ICKEGLGLCGKDCDARCKARHSPSENPHGSCDRIGNVLLCECLYNCGATPMPKPKFCTIG 69
           IC + LGLC   CD RCKA+H PS      CD    +LLC C Y CG T     K C  G
Sbjct: 28  ICNDRLGLC-DGCDQRCKAKHGPS--CESKCDGPVGMLLCTCTYECGPT-----KLCNGG 87

Query: 70  LGQCSYQCKSDCCNAKCGSQYRNGEGYCDTNVGVSLCQCVYPC 113
           LG C   C   CC+  C  +Y  G GYC+T    SLC C YPC
Sbjct: 88  LGNCGESCNEQCCDRNCAQRYNGGHGYCNTLDDFSLCLCKYPC 122

BLAST of Bhi06G001091 vs. TAIR 10
Match: AT4G30074.1 (low-molecular-weight cysteine-rich 19 )

HSP 1 Score: 100.1 bits (248), Expect = 1.2e-21
Identity = 48/103 (46.60%), Postives = 59/103 (57.28%), Query Frame = 0

Query: 11  CKEGLGLCGKDCDARCKARHSPSENPHGSCDRIGNVLLCECLYNCGATPM-PKPKFCTIG 70
           C EG+G C + CD RCKARH P+    G+CD      LC C Y CG  P  P+PK C  G
Sbjct: 29  CIEGIGNC-QQCDVRCKARHGPAAK--GACD--SKFQLCTCNYPCGQGPSPPQPKKCYGG 88

Query: 71  LGQCSYQCKSDCCNAKCGSQYRNGEGYCDTNVGVSLCQCVYPC 113
            G CS +C + CCN  C  +Y  G G+CD+    SLC+C Y C
Sbjct: 89  AGICSDRCGAQCCNQNCAQKYNQGSGFCDSIGNTSLCKCQYNC 126

BLAST of Bhi06G001091 vs. ExPASy Swiss-Prot
Match: P82789 (Defensin-like protein 181 OS=Arabidopsis thaliana OX=3702 GN=PDF3.1 PE=2 SV=2)

HSP 1 Score: 101.3 bits (251), Expect = 7.3e-21
Identity = 48/103 (46.60%), Postives = 54/103 (52.43%), Query Frame = 0

Query: 10  ICKEGLGLCGKDCDARCKARHSPSENPHGSCDRIGNVLLCECLYNCGATPMPKPKFCTIG 69
           IC + LGLC   CD RCKA+H PS      CD    +LLC C Y CG T     K C  G
Sbjct: 28  ICNDRLGLC-DGCDQRCKAKHGPS--CESKCDGPVGMLLCTCTYECGPT-----KLCNGG 87

Query: 70  LGQCSYQCKSDCCNAKCGSQYRNGEGYCDTNVGVSLCQCVYPC 113
           LG C   C   CC+  C  +Y  G GYC+T    SLC C YPC
Sbjct: 88  LGNCGESCNEQCCDRNCAQRYNGGHGYCNTLDDFSLCLCKYPC 122

BLAST of Bhi06G001091 vs. ExPASy Swiss-Prot
Match: P82733 (Defensin-like protein 183 OS=Arabidopsis thaliana OX=3702 GN=LCR19 PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.6e-20
Identity = 48/103 (46.60%), Postives = 59/103 (57.28%), Query Frame = 0

Query: 11  CKEGLGLCGKDCDARCKARHSPSENPHGSCDRIGNVLLCECLYNCGATPM-PKPKFCTIG 70
           C EG+G C + CD RCKARH P+    G+CD      LC C Y CG  P  P+PK C  G
Sbjct: 29  CIEGIGNC-QQCDVRCKARHGPAAK--GACD--SKFQLCTCNYPCGQGPSPPQPKKCYGG 88

Query: 71  LGQCSYQCKSDCCNAKCGSQYRNGEGYCDTNVGVSLCQCVYPC 113
            G CS +C + CCN  C  +Y  G G+CD+    SLC+C Y C
Sbjct: 89  AGICSDRCGAQCCNQNCAQKYNQGSGFCDSIGNTSLCKCQYNC 126

BLAST of Bhi06G001091 vs. ExPASy TrEMBL
Match: A0A0A0LMG4 (Defensin-like protein OS=Cucumis sativus OX=3659 GN=Csa_2G060470 PE=3 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.7e-42
Identity = 80/115 (69.57%), Postives = 93/115 (80.87%), Query Frame = 0

Query: 1   MTPVAGKQRICKEGLGLCGKDCDARCKARHSPSENPHGSCDRIG-NVLLCECLYNCG-AT 60
           MTPV G + IC EGLG CG +CDARCKA+HSP+ENP GSCD+IG ++ LC CLY+C  +T
Sbjct: 1   MTPVVGNKDICTEGLGPCGTNCDARCKAQHSPNENPQGSCDQIGSSISLCNCLYSCDRST 60

Query: 61  PMPKPKF-CTIGLGQCSYQCKSDCCNAKCGSQYRNGEGYCDTNVGVSLCQCVYPC 113
           PMPKP   C  GLG C+ QCKSDCCNAKCG QY+ GEG+CDTNVGVSLCQC +PC
Sbjct: 61  PMPKPPLNCISGLGLCTAQCKSDCCNAKCGQQYKGGEGFCDTNVGVSLCQCSHPC 115

BLAST of Bhi06G001091 vs. ExPASy TrEMBL
Match: A0A5A7SMA4 (Defensin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold506G00230 PE=3 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 3.3e-40
Identity = 79/115 (68.70%), Postives = 88/115 (76.52%), Query Frame = 0

Query: 1   MTPVAGKQRICKEGLGLCGKDCDARCKARHSPSENPHGSCDRIG-NVLLCECLYNCG-AT 60
           MTPV G + IC EGLG CG +CDARCKA+HSP ENP GSCD+IG N+ LC CLY CG  T
Sbjct: 1   MTPVVGNKNICSEGLGPCGTNCDARCKAKHSPIENPQGSCDQIGSNLSLCYCLYTCGIPT 60

Query: 61  PMPK-PKFCTIGLGQCSYQCKSDCCNAKCGSQYRNGEGYCDTNVGVSLCQCVYPC 113
           P P  P+ C  GLG C+ QCKSDCCNAKC  QY+ GEGYCDTNVGV LCQC +PC
Sbjct: 61  PKPNPPQNCISGLGLCTGQCKSDCCNAKCRRQYQGGEGYCDTNVGVPLCQCSHPC 115

BLAST of Bhi06G001091 vs. ExPASy TrEMBL
Match: A0A5D3CNI5 (Defensin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18312G00010 PE=3 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.6e-39
Identity = 76/115 (66.09%), Postives = 86/115 (74.78%), Query Frame = 0

Query: 1   MTPVAGKQRICKEGLGLCGKDCDARCKARHSPSENPHGSCDRIG-NVLLCECLYNCGATP 60
           MTPV G + IC EGLG CG +CDARCKA+HSP ENP G CD+IG N+ LC CLY CG   
Sbjct: 1   MTPVVGNKNICSEGLGPCGTNCDARCKAKHSPIENPQGRCDQIGSNLSLCYCLYTCGIPT 60

Query: 61  MP--KPKFCTIGLGQCSYQCKSDCCNAKCGSQYRNGEGYCDTNVGVSLCQCVYPC 113
           +    P+ C  GLG C+ QCKSDCCNAKC SQY+ GEGYCDTNVGV LCQC +PC
Sbjct: 61  LKPNPPQNCISGLGLCTGQCKSDCCNAKCRSQYKGGEGYCDTNVGVPLCQCTHPC 115

BLAST of Bhi06G001091 vs. ExPASy TrEMBL
Match: A0A2I0JK99 (Defensin-like protein OS=Punica granatum OX=22663 GN=LOC116188723 PE=3 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.9e-24
Identity = 52/102 (50.98%), Postives = 61/102 (59.80%), Query Frame = 0

Query: 11  CKEGLGLCGKDCDARCKARHSPSENPHGSCDRIGNVLLCECLYNCGATPMPKPKFCTIGL 70
           C E LGLCGKDC+ARC ARH       GSCD      LC C Y+C   P P  K CT G 
Sbjct: 31  CSESLGLCGKDCEARCSARHPGQSGVQGSCDYSITPSLCTCYYDCQQPPEPPQKQCTGGA 90

Query: 71  GQCSYQCKSDCCNAKCGSQYRNGEGYCDTNVGVSLCQCVYPC 113
           G CS +C++DCCNA C S+Y+ G G+C+      LCQC Y C
Sbjct: 91  GLCSVKCQNDCCNANCASKYKQGTGFCNMLPRTWLCQCQYAC 132

BLAST of Bhi06G001091 vs. ExPASy TrEMBL
Match: A0A218XR16 (Defensin-like protein OS=Punica granatum OX=22663 GN=CDL15_Pgr015997 PE=3 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.9e-24
Identity = 52/102 (50.98%), Postives = 61/102 (59.80%), Query Frame = 0

Query: 11  CKEGLGLCGKDCDARCKARHSPSENPHGSCDRIGNVLLCECLYNCGATPMPKPKFCTIGL 70
           C E LGLCGKDC+ARC ARH       GSCD      LC C Y+C   P P  K CT G 
Sbjct: 30  CSESLGLCGKDCEARCSARHPGQSGVQGSCDYSITPSLCTCYYDCQQPPEPPQKQCTGGA 89

Query: 71  GQCSYQCKSDCCNAKCGSQYRNGEGYCDTNVGVSLCQCVYPC 113
           G CS +C++DCCNA C S+Y+ G G+C+      LCQC Y C
Sbjct: 90  GLCSVKCQNDCCNANCASKYKQGTGFCNMLPRTWLCQCQYAC 131

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT5G38330.15.2e-2246.60low-molecular-weight cysteine-rich 80 [more]
AT4G30074.11.2e-2146.60low-molecular-weight cysteine-rich 19 [more]
Match NameE-valueIdentityDescription
P827897.3e-2146.60Defensin-like protein 181 OS=Arabidopsis thaliana OX=3702 GN=PDF3.1 PE=2 SV=2[more]
P827331.6e-2046.60Defensin-like protein 183 OS=Arabidopsis thaliana OX=3702 GN=LCR19 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LMG42.7e-4269.57Defensin-like protein OS=Cucumis sativus OX=3659 GN=Csa_2G060470 PE=3 SV=1[more]
A0A5A7SMA43.3e-4068.70Defensin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold50... [more]
A0A5D3CNI51.6e-3966.09Defensin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18... [more]
A0A2I0JK991.9e-2450.98Defensin-like protein OS=Punica granatum OX=22663 GN=LOC116188723 PE=3 SV=1[more]
A0A218XR161.9e-2450.98Defensin-like protein OS=Punica granatum OX=22663 GN=CDL15_Pgr015997 PE=3 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039641Low-molecular-weight cysteine-rich proteinPANTHERPTHR36788DEFENSIN-LIKE PROTEIN 183coord: 7..112

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi06M001091Bhi06M001091mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044419 biological process involved in interspecies interaction between organisms
biological_process GO:0006952 defense response