Bhi06G000964 (gene) Wax gourd (B227) v1

Overview
NameBhi06G000964
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionMuDRA-like transposase
Locationchr6: 30684949 .. 30685311 (+)
RNA-Seq ExpressionBhi06G000964
SyntenyBhi06G000964
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAATAATTCGTAAGGCGATAGACAGAGAAAGATGACACGAAGTTAGGCCAATTGACCAACATGAGTTTGAGGTCATAGATGGGGTTTGGGAGGCCATGTCAATATTCACGCAAGAACTGTACTGTTGCATGTTTGATTATTATGAACTCCCTTATTCGCACATGATTGGTGCATGCAGGATTCAAAATTTTGATCCTATCTCTCTTTGCTCACGGGTATACTCTGTCGAATCAGTATTGGCTACTTATGCTGAACCTATACGTCCACTTGGGCACTTTTCAGAGTGGAAACAATCATCAGATTTCATTGACGTTAAAACATTGCCTCCAAAAAGAGTTCCAATAGTAGGTCGCCCATGA

mRNA sequence

ATGTCAATAATTCTTAGGCCAATTGACCAACATGAGTTTGAGGTCATAGATGGGGTTTGGGAGGCCATGTCAATATTCACGCAAGAACTGTACTGTTGCATGTTTGATTATTATGAACTCCCTTATTCGCACATGATTGGTGCATGCAGGATTCAAAATTTTGATCCTATCTCTCTTTGCTCACGGGTATACTCTGTCGAATCAGTATTGGCTACTTATGCTGAACCTATACGTCCACTTGGGCACTTTTCAGAGTGGAAACAATCATCAGATTTCATTGACGTTAAAACATTGCCTCCAAAAAGAGTTCCAATAGTAGGTCGCCCATGA

Coding sequence (CDS)

ATGTCAATAATTCTTAGGCCAATTGACCAACATGAGTTTGAGGTCATAGATGGGGTTTGGGAGGCCATGTCAATATTCACGCAAGAACTGTACTGTTGCATGTTTGATTATTATGAACTCCCTTATTCGCACATGATTGGTGCATGCAGGATTCAAAATTTTGATCCTATCTCTCTTTGCTCACGGGTATACTCTGTCGAATCAGTATTGGCTACTTATGCTGAACCTATACGTCCACTTGGGCACTTTTCAGAGTGGAAACAATCATCAGATTTCATTGACGTTAAAACATTGCCTCCAAAAAGAGTTCCAATAGTAGGTCGCCCATGA

Protein sequence

MSIILRPIDQHEFEVIDGVWEAMSIFTQELYCCMFDYYELPYSHMIGACRIQNFDPISLCSRVYSVESVLATYAEPIRPLGHFSEWKQSSDFIDVKTLPPKRVPIVGRP
Homology
[Close]
BLAST of Bhi06G000964 vs. ExPASy TrEMBL
Match: A0A6J1DK35 (uncharacterized protein LOC111021833 OS=Momordica charantia OX=3673 GN=LOC111021833 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.4e-16
Identity = 43/102 (42.16%), Postives = 62/102 (60.78%), Query Frame = 0 

Query: 8   IDQHEFEVIDGVWEA-MSIFTQELYCCMFDYYELPYSHMIGACRIQNFDPISLCSRVYSV 67
           IDQ  F+V DG ++  + +      C  FDY+++P SH+I A  ++N +P SLC   Y+ 
Sbjct: 185 IDQFHFQVRDGNFDGIVDLNAMTCSCREFDYFKIPCSHVIAAAMMRNINPYSLCDEAYTT 244

Query: 68  ESVLATYAEPIRPLGHFSEWKQSSDFIDVKTLPPKRVPIVGR 109
            S +  YAEPI P+GH S W  S +F+++   PPK VP VGR
Sbjct: 245 NSWILAYAEPIFPVGHVSTWNSSPEFVNIPVEPPKTVPRVGR 286

[Close]
BLAST of Bhi06G000964 vs. ExPASy TrEMBL
Match: A0A6J1DYC4 (uncharacterized protein LOC111025678 OS=Momordica charantia OX=3673 GN=LOC111025678 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 4.2e-16
Identity = 43/102 (42.16%), Postives = 60/102 (58.82%), Query Frame = 0 

Query: 8   IDQHEFEVIDGVWEAMSIFTQELYCCM-FDYYELPYSHMIGACRIQNFDPISLCSRVYSV 67
           IDQ  F+V DG  + +      +  C  FDY+++P SH I A  ++N +P SLC   Y+ 
Sbjct: 374 IDQFHFQVRDGNLDGIVDLNAMMCSCREFDYFKIPCSHAIAAATMRNINPYSLCDEAYTT 433

Query: 68  ESVLATYAEPIRPLGHFSEWKQSSDFIDVKTLPPKRVPIVGR 109
            S +  YAEPI P+GH S W  S +F+++   PPK VP VGR
Sbjct: 434 NSWILAYAEPIFPVGHISTWNSSPEFVNIPVEPPKTVPRVGR 475

[Close]
BLAST of Bhi06G000964 vs. ExPASy TrEMBL
Match: A0A6J1DTD4 (uncharacterized protein LOC111023804 OS=Momordica charantia OX=3673 GN=LOC111023804 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.6e-15
Identity = 44/109 (40.37%), Postives = 63/109 (57.80%), Query Frame = 0 

Query: 4   ILRPIDQHEFEV----IDGVWEAMSIFTQELYCCMFDYYELPYSHMIGACRIQNFDPISL 63
           I+  IDQ  F+V    +DG+   + +      C  FDY+++P SH I A  ++N +P SL
Sbjct: 44  IVDNIDQFHFQVRDDNLDGI---VDLNAMTCSCWEFDYFKIPCSHAIAAATMRNINPYSL 103

Query: 64  CSRVYSVESVLATYAEPIRPLGHFSEWKQSSDFIDVKTLPPKRVPIVGR 109
           C   Y+  S +  YAEPI P+GH S W  S +F+++   PPK VP VGR
Sbjct: 104 CDEAYTTNSWILAYAEPIFPVGHVSTWNSSPEFVNIPVEPPKTVPRVGR 149

[Close]
BLAST of Bhi06G000964 vs. ExPASy TrEMBL
Match: Q5GIT1 (MuDRA transposase-like OS=Cucumis melo OX=3656 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 2.1e-15
Identity = 45/110 (40.91%), Postives = 69/110 (62.73%), Query Frame = 0 

Query: 1   MSIILRPIDQHEFEVID-GVWEAMSIFTQELYCCMFDYYELPYSHMIGACRIQNFDPISL 60
           +++ + PID ++F V D    E +++ T+E  C  F   +LP SH I A R++N +  SL
Sbjct: 654 LTMKVNPIDCYQFHVKDLDKEEVVNLQTKECTCKEFQAEQLPCSHAIAAARVRNINVYSL 713

Query: 61  CSRVYSVESVLATYAEPIRPLGHFSEWKQSSDFIDVKTLPPKRVPIVGRP 110
           C+  Y+ E +LA YAE + P+G+ S+WK S D++ +  LPPK V  VGRP
Sbjct: 714 CANYYTNECLLAAYAEAVYPVGNQSDWKTSEDYVHMTVLPPKVVKRVGRP 763

[Close]
BLAST of Bhi06G000964 vs. ExPASy TrEMBL
Match: A0A5D3BSX9 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G00750 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 2.1e-15
Identity = 45/110 (40.91%), Postives = 69/110 (62.73%), Query Frame = 0 

Query: 1   MSIILRPIDQHEFEVID-GVWEAMSIFTQELYCCMFDYYELPYSHMIGACRIQNFDPISL 60
           +++ + PID ++F V D    E +++ T+E  C  F   +LP SH I A R++N +  SL
Sbjct: 654 LTMKVNPIDCYQFHVKDLDKEEVVNLQTKECTCKEFQAEQLPCSHAIAAARVRNINVYSL 713

Query: 61  CSRVYSVESVLATYAEPIRPLGHFSEWKQSSDFIDVKTLPPKRVPIVGRP 110
           C+  Y+ E +LA YAE + P+G+ S+WK S D++ +  LPPK V  VGRP
Sbjct: 714 CANYYTNECLLAAYAEAVYPVGNQSDWKTSEDYVHMTVLPPKVVKRVGRP 763

The following BLAST results are available for this feature:
BLAST of Bhi06G000964 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi06G000964 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi06G000964 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DK351.4e-1642.16uncharacterized protein LOC111021833 OS=Momordica charantia OX=3673 GN=LOC111021... [more]
A0A6J1DYC44.2e-1642.16uncharacterized protein LOC111025678 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1DTD41.6e-1540.37uncharacterized protein LOC111023804 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
Q5GIT12.1e-1540.91MuDRA transposase-like OS=Cucumis melo OX=3656 PE=4 SV=1[more]
A0A5D3BSX92.1e-1540.91MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi06M000964Bhi06M000964mRNA