Bhi06G000869 (gene) Wax gourd (B227) v1

Overview


Name	Bhi06G000869
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Zinc finger, C2H2-like protein
Location	chr6: 26870163 .. 26870555 (+)
RNA-Seq Expression	Bhi06G000869
Synteny	Bhi06G000869

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGAAACACATCAAGCATGGAGACAAATCCTGAAAACGACGCCGTGTTGGGATCAAGAGAAGGCGTTTGCCGACGACGTCGCCGCCGTGTGGCCACCGAGATCTTACTCCTGCAACTTCTGTATGAGACAATTTCGGTCAGCTCAAGCTTTGGGTGGCCACATGAACGTCCATCGAAGAGACCGTGCTAAGCTTCAAAACCATCCCAACCGTCCATTCTTCATCAAACCATCTCCCACCTTTGATCTTCTTACTCACCATTTTTTTCCCAAAAACAACTCTTCTTCTCCCCTTTCTTCTCCATTCTCTCTCAAAAGACCTAAACTTTCTTCTTCTTCTTCTTCTTCTAATTCTGAGCTCCTCAACCTTGACCTTGACCTCAAGCTATAA

mRNA sequence

ATGGCAGAAACACATCAAGCATGGAGACAAATCCTGAAAACGACGCCGTGTTGGGATCAAGAGAAGGCGTTTGCCGACGACGTCGCCGCCGTGTGGCCACCGAGATCTTACTCCTGCAACTTCTGTATGAGACAATTTCGGTCAGCTCAAGCTTTGGGTGGCCACATGAACGTCCATCGAAGAGACCGTGCTAAGCTTCAAAACCATCCCAACCGTCCATTCTTCATCAAACCATCTCCCACCTTTGATCTTCTTACTCACCATTTTTTTCCCAAAAACAACTCTTCTTCTCCCCTTTCTTCTCCATTCTCTCTCAAAAGACCTAAACTTTCTTCTTCTTCTTCTTCTTCTAATTCTGAGCTCCTCAACCTTGACCTTGACCTCAAGCTATAA

Coding sequence (CDS)

ATGGCAGAAACACATCAAGCATGGAGACAAATCCTGAAAACGACGCCGTGTTGGGATCAAGAGAAGGCGTTTGCCGACGACGTCGCCGCCGTGTGGCCACCGAGATCTTACTCCTGCAACTTCTGTATGAGACAATTTCGGTCAGCTCAAGCTTTGGGTGGCCACATGAACGTCCATCGAAGAGACCGTGCTAAGCTTCAAAACCATCCCAACCGTCCATTCTTCATCAAACCATCTCCCACCTTTGATCTTCTTACTCACCATTTTTTTCCCAAAAACAACTCTTCTTCTCCCCTTTCTTCTCCATTCTCTCTCAAAAGACCTAAACTTTCTTCTTCTTCTTCTTCTTCTAATTCTGAGCTCCTCAACCTTGACCTTGACCTCAAGCTATAA

Protein sequence

MAETHQAWRQILKTTPCWDQEKAFADDVAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQNHPNRPFFIKPSPTFDLLTHHFFPKNNSSSPLSSPFSLKRPKLSSSSSSSNSELLNLDLDLKL

Homology

[Close]

BLAST of Bhi06G000869 vs. TAIR 10
Match: AT2G37740.1 (zinc-finger protein 10 )

HSP 1 Score: 84.3 bits (207), Expect = 7.7e-17
Identity = 40/70 (57.14%), Postives = 54/70 (77.14%), Query Frame = 0


Query: 20 QEKAFADDVAA--VWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQNHPNRPFFIK 79
          +E AFA+D AA  +WPPRSY+C+FC R+F+SAQALGGHMNVHRRDRA+L+   ++  F K
Sbjct: 20 EELAFAEDDAAGSLWPPRSYTCSFCRREFKSAQALGGHMNVHRRDRARLKQADDQYLFPK 79

Query: 80 PSPTFDLLTH 88
           S + +  +H
Sbjct: 80 SSSSPEYPSH 89

[Close]

BLAST of Bhi06G000869 vs. TAIR 10
Match: AT3G23130.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 79.7 bits (195), Expect = 1.9e-15
Identity = 44/84 (52.38%), Postives = 54/84 (64.29%), Query Frame = 0


Query: 32  WPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQNHPNRPFFIKPSPTFDLLTHHFFP 91
           WPPRSY+C+FC R+FRSAQALGGHMNVHRRDRA+L+   +      PSP +    + +  
Sbjct: 42  WPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQSPSSSSTPSPPYPNPNYSYST 101

Query: 92  KNNSSSPLSSPFSLKRPKLSSSSS 116
             NS  P  SP +L  P LS  SS
Sbjct: 102 MANSPPPHHSPLTL-FPTLSPPSS 124

[Close]

BLAST of Bhi06G000869 vs. TAIR 10
Match: AT4G17810.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 77.0 bits (188), Expect = 1.2e-14
Identity = 35/53 (66.04%), Postives = 38/53 (71.70%), Query Frame = 0


Query: 22 KAFADDV-----AAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQNH 70
          KAF  D         WPPRSY+CNFC R+FRSAQALGGHMNVHRRDRA  + H
Sbjct: 26 KAFEQDTKGNISGTTWPPRSYTCNFCRREFRSAQALGGHMNVHRRDRASSRAH 78

[Close]

BLAST of Bhi06G000869 vs. TAIR 10
Match: AT5G06070.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 75.1 bits (183), Expect = 4.7e-14
Identity = 35/60 (58.33%), Postives = 43/60 (71.67%), Query Frame = 0


Query: 20 QEKAFAD------DVAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQNHPNRP 74
          +E+AFA           +WPPRSYSC+FC R+F+SAQALGGHMNVHRRDRA+L+     P
Sbjct: 32 EERAFASAEEYGGGGGCMWPPRSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQSLSP 91

[Close]

BLAST of Bhi06G000869 vs. TAIR 10
Match: AT2G42410.1 (zinc finger protein 11 )

HSP 1 Score: 74.3 bits (181), Expect = 7.9e-14
Identity = 43/98 (43.88%), Postives = 56/98 (57.14%), Query Frame = 0


Query: 32  WPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQNHPNRPF-------FIKPSPTF-- 91
           WPP++Y+C+FC R+FRSAQALGGHMNVHRRDRAKL+  P+  F          P+P F  
Sbjct: 44  WPPKNYTCSFCRREFRSAQALGGHMNVHRRDRAKLRQIPSWLFEPHHHTPIANPNPNFSS 103

Query: 92  ----DLLTHHFFPKNNSSSPLSSPFSLKRPKLSSSSSS 117
                  T H  P   +    ++PF   R  L  S++S
Sbjct: 104 SSSSSTTTAHLEPSLTNQRSKTTPFPSARFDLLDSTTS 141

[Close]

BLAST of Bhi06G000869 vs. ExPASy Swiss-Prot
Match: O80942 (Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.1e-15
Identity = 40/70 (57.14%), Postives = 54/70 (77.14%), Query Frame = 0


Query: 20 QEKAFADDVAA--VWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQNHPNRPFFIK 79
          +E AFA+D AA  +WPPRSY+C+FC R+F+SAQALGGHMNVHRRDRA+L+   ++  F K
Sbjct: 20 EELAFAEDDAAGSLWPPRSYTCSFCRREFKSAQALGGHMNVHRRDRARLKQADDQYLFPK 79

Query: 80 PSPTFDLLTH 88
           S + +  +H
Sbjct: 80 SSSSPEYPSH 89

[Close]

BLAST of Bhi06G000869 vs. ExPASy Swiss-Prot
Match: Q38895 (Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 2.7e-14
Identity = 44/84 (52.38%), Postives = 54/84 (64.29%), Query Frame = 0


Query: 32  WPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQNHPNRPFFIKPSPTFDLLTHHFFP 91
           WPPRSY+C+FC R+FRSAQALGGHMNVHRRDRA+L+   +      PSP +    + +  
Sbjct: 42  WPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQSPSSSSTPSPPYPNPNYSYST 101

Query: 92  KNNSSSPLSSPFSLKRPKLSSSSS 116
             NS  P  SP +L  P LS  SS
Sbjct: 102 MANSPPPHHSPLTL-FPTLSPPSS 124

[Close]

BLAST of Bhi06G000869 vs. ExPASy Swiss-Prot
Match: Q9LHS9 (Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 GN=RBE PE=2 SV=2)

HSP 1 Score: 75.1 bits (183), Expect = 6.5e-13
Identity = 35/60 (58.33%), Postives = 43/60 (71.67%), Query Frame = 0


Query: 20 QEKAFAD------DVAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQNHPNRP 74
          +E+AFA           +WPPRSYSC+FC R+F+SAQALGGHMNVHRRDRA+L+     P
Sbjct: 32 EERAFASAEEYGGGGGCMWPPRSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQSLSP 91

[Close]

BLAST of Bhi06G000869 vs. ExPASy Swiss-Prot
Match: Q9SLB8 (Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.1e-12
Identity = 43/98 (43.88%), Postives = 56/98 (57.14%), Query Frame = 0


Query: 32  WPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQNHPNRPF-------FIKPSPTF-- 91
           WPP++Y+C+FC R+FRSAQALGGHMNVHRRDRAKL+  P+  F          P+P F  
Sbjct: 44  WPPKNYTCSFCRREFRSAQALGGHMNVHRRDRAKLRQIPSWLFEPHHHTPIANPNPNFSS 103

Query: 92  ----DLLTHHFFPKNNSSSPLSSPFSLKRPKLSSSSSS 117
                  T H  P   +    ++PF   R  L  S++S
Sbjct: 104 SSSSSTTTAHLEPSLTNQRSKTTPFPSARFDLLDSTTS 141

[Close]

BLAST of Bhi06G000869 vs. ExPASy Swiss-Prot
Match: Q9SR34 (Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.8e-08
Identity = 25/33 (75.76%), Postives = 30/33 (90.91%), Query Frame = 0


Query: 35 RSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQ 68
          RSY C+FC+R F +AQALGGHMN+HRRDRAKL+
Sbjct: 33 RSYVCSFCIRGFSNAQALGGHMNIHRRDRAKLR 65

[Close]

BLAST of Bhi06G000869 vs. ExPASy TrEMBL
Match: A0A5A7UA35 (Transcriptional regulator SUPERMAN-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold293G00710 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 1.0e-53
Identity = 110/131 (83.97%), Postives = 118/131 (90.08%), Query Frame = 0


Query: 1   MAETHQAWRQILKTTPCWDQEKAFADDVAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHR 60
           MAETHQ WRQILKTT  WDQEKAFADDVAAVWPPRSYSC FCMRQFRSAQALGGHMNVHR
Sbjct: 1   MAETHQVWRQILKTTSYWDQEKAFADDVAAVWPPRSYSCTFCMRQFRSAQALGGHMNVHR 60

Query: 61  RDRAKLQNHPN-RPFFIKPSPTFDLLTHHFFPKNNSSSPLSSPFSLKRPKLSSSSSSSNS 120
           RDRAKLQNHPN RPFFIKP+PTFDLLTHHF PKNN+    S PFSLK+PKL+SSSSSS++
Sbjct: 61  RDRAKLQNHPNRRPFFIKPTPTFDLLTHHFSPKNNN----SPPFSLKKPKLASSSSSSSN 120

Query: 121 ELLNLDLDLKL 131
             L+LDL+LKL
Sbjct: 121 SELHLDLELKL 127

[Close]

BLAST of Bhi06G000869 vs. ExPASy TrEMBL
Match: A0A1S3CGM6 (transcriptional regulator SUPERMAN-like OS=Cucumis melo OX=3656 GN=LOC103500239 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 1.0e-53
Identity = 110/131 (83.97%), Postives = 118/131 (90.08%), Query Frame = 0


Query: 1   MAETHQAWRQILKTTPCWDQEKAFADDVAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHR 60
           MAETHQ WRQILKTT  WDQEKAFADDVAAVWPPRSYSC FCMRQFRSAQALGGHMNVHR
Sbjct: 1   MAETHQVWRQILKTTSYWDQEKAFADDVAAVWPPRSYSCTFCMRQFRSAQALGGHMNVHR 60

Query: 61  RDRAKLQNHPN-RPFFIKPSPTFDLLTHHFFPKNNSSSPLSSPFSLKRPKLSSSSSSSNS 120
           RDRAKLQNHPN RPFFIKP+PTFDLLTHHF PKNN+    S PFSLK+PKL+SSSSSS++
Sbjct: 61  RDRAKLQNHPNRRPFFIKPTPTFDLLTHHFSPKNNN----SPPFSLKKPKLASSSSSSSN 120

Query: 121 ELLNLDLDLKL 131
             L+LDL+LKL
Sbjct: 121 SELHLDLELKL 127

[Close]

BLAST of Bhi06G000869 vs. ExPASy TrEMBL
Match: A0A0A0KLQ3 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G183770 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 4.4e-52
Identity = 113/136 (83.09%), Postives = 118/136 (86.76%), Query Frame = 0


Query: 1   MAETHQAWRQILKTTPCWDQEKAFADDVAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHR 60
           MA+THQ WRQILKTT  WDQEKAFADDVAAVWPPRSYSC FCMRQFRSAQALGGHMNVHR
Sbjct: 1   MAQTHQLWRQILKTTSYWDQEKAFADDVAAVWPPRSYSCTFCMRQFRSAQALGGHMNVHR 60

Query: 61  RDRAKLQNHPNRPFFIKP-SPTFDLLTHHFFPKNNSSSPLSSPFSLKRPKL-----SSSS 120
           RDRAKLQNHPNRPFFIKP +PTFDLLTHHF PKNN     S PFSLK+PKL     SSSS
Sbjct: 61  RDRAKLQNHPNRPFFIKPTTPTFDLLTHHFSPKNND----SPPFSLKKPKLASSSSSSSS 120

Query: 121 SSSNSELLNLDLDLKL 131
           SSSNSE L+LDL+LKL
Sbjct: 121 SSSNSE-LHLDLELKL 131

[Close]

BLAST of Bhi06G000869 vs. ExPASy TrEMBL
Match: A0A6J1JCP1 (zinc finger protein 10-like OS=Cucurbita maxima OX=3661 GN=LOC111485589 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 3.1e-34
Identity = 88/137 (64.23%), Postives = 97/137 (70.80%), Query Frame = 0


Query: 1   MAETHQAWRQIL------KTTPCWDQEKAFADD-VAAVWPPRSYSCNFCMRQFRSAQALG 60
           MAETH  WRQIL      K +P W +EKAFA+D  AAVWPPRSYSCNFCMRQFRSAQALG
Sbjct: 1   MAETHHLWRQILNYSNTFKPSPSW-EEKAFAEDTAAAVWPPRSYSCNFCMRQFRSAQALG 60

Query: 61  GHMNVHRRDRAKLQNHPNRPFFIKPSPTFDLLTHHFFPKNNSSSPLSSPFSLKRPKLSSS 120
           GHMNVHRRDRA+LQN+PNR F IKP+PT DL TH F PKN+ S    S   LKR K+  S
Sbjct: 61  GHMNVHRRDRARLQNNPNRSFLIKPTPTLDLQTHPFCPKNSRS---DSGSCLKRAKVCVS 120

Query: 121 SSSSNSELLNLDLDLKL 131
                     LDL+LKL
Sbjct: 121 EE-------QLDLELKL 126

[Close]

BLAST of Bhi06G000869 vs. ExPASy TrEMBL
Match: A0A6G1ESD7 (C2H2-type domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_034180 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.7e-16
Identity = 53/112 (47.32%), Postives = 72/112 (64.29%), Query Frame = 0


Query: 14  TTPCWD--QEKAFADDVA-----AVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRAKL 73
           +TPC++  +E+AFA+D A      +WPPRSYSC+FC R+FRSAQALGGHMNVHRRDRA+L
Sbjct: 26  STPCYESWEERAFAEDSAGHLGGCIWPPRSYSCSFCGREFRSAQALGGHMNVHRRDRARL 85

Query: 74  -------------QNH---PNRPFFIKP-SPTFDLLTHHFFPKNNSSSPLSS 102
                        QNH   P++ + I+P  P    L H + P  +S +PL++
Sbjct: 86  KLCGVAEGGAGGEQNHGMPPHQSYMIQPCPPQIGALQHAYSPNPSSGAPLAA 137

The following BLAST results are available for this feature:

BLAST of Bhi06G000869 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37740.1	7.7e-17	57.14	zinc-finger protein 10	[more]
AT3G23130.1	1.9e-15	52.38	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT4G17810.1	1.2e-14	66.04	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT5G06070.1	4.7e-14	58.33	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT2G42410.1	7.9e-14	43.88	zinc finger protein 11	[more]

BLAST of Bhi06G000869 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80942	1.1e-15	57.14	Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1	[more]
Q38895	2.7e-14	52.38	Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 S...	[more]
Q9LHS9	6.5e-13	58.33	Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9SLB8	1.1e-12	43.88	Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1	[more]
Q9SR34	2.8e-08	75.76	Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1	[more]

BLAST of Bhi06G000869 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UA35	1.0e-53	83.97	Transcriptional regulator SUPERMAN-like OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3CGM6	1.0e-53	83.97	transcriptional regulator SUPERMAN-like OS=Cucumis melo OX=3656 GN=LOC103500239 ...	[more]
A0A0A0KLQ3	4.4e-52	83.09	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G183770 P...	[more]
A0A6J1JCP1	3.1e-34	64.23	zinc finger protein 10-like OS=Cucurbita maxima OX=3661 GN=LOC111485589 PE=4 SV=...	[more]
A0A6G1ESD7	1.7e-16	47.32	C2H2-type domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 ...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 34..76 e-value: 5.2E-6 score: 28.2
None	No IPR available	PFAM	PF13912	zf-C2H2_6	coord: 37..61 e-value: 9.7E-6 score: 25.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..119
None	No IPR available	PANTHER	PTHR45801:SF68	CHAIN A, NMR STRUCTURE OF THE SINGLE QALGGH ZINC FINGER DOMAIN FROM ARABIDOPSIS THALIANA SUPERMAN PROTEIN	coord: 18..118
None	No IPR available	PANTHER	PTHR45801	OS07G0101800 PROTEIN	coord: 18..118
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 39..59
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 37..64 score: 11.094336
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 34..63

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi06M000869	Bhi06M000869	mRNA