Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCTGTGAAGTAACAAGAAATGTTGAAAACATAGAATCTGGTGTCCAAAATTGGTTGACCAAGACTGACTCCATCATTGAAAAATCTGAAACATTCCTAAACAACCTTTCTCAACAAGGTTGATTGTGCTTGAATTTGGTCCGAAGACACCAATTAAGTAGGAAAGTTGTAAAGTTGGTTGATGAGGTTGTTGAGATGAAAATGAGGGAAATTTTGATAGAGTTTCCTATCGTGTAGCTCTCTCAGTGGTTGAGAGTTCAAAGGCAAAGACTTCAGATTTTATTAACTTTGAATCAAGAAAGCCAAATATAGACAAAATCATTGGTTCACTTATGGATGACAATGTCCACGAAATTGGAGTGTATGGGATGAGAGGTGTTGGCAAAACAATGTTAGTGCAATAGATCTCGAGAATAGTAATGGAGGAAAAGTTATTTGATGAAGTGGTCATATCGACCATAAGTCCAACCCTGGACTTAAAAAAAATTCAAGGGCAACTTGATGATATGCTTGGGTTGAAATTTGACCAAGAAATAGAGGAAAGAATTACCCTTATGCTACATAAAAGGTTGAAGATGGAACAAAGTATCCTCGTTGTACTTGATGATGAATGGAAGCAAAATGATTTGGAAATGATAGGAATTCCAAGCATTGAAGATCGCATATGA
mRNA sequence
GTCTGTGAAGTAACAAGAAATGTTGAAAACATAGAATCTGGTGTCCAAAATTGGTTGACCAAGACTGACTCCATCATTGAAAAATCTGAAACATTCCTAAACAACCTTTCTCAACAAGTTGTAAAGTTGGTTGATGAGGTTGTTGAGATGAAAATGAGGGAAATTTTGATAGAGTTTCCTATCAGTTCAAAGGCAAAGACTTCAGATTTTATTAACTTTGAATCAAGAAAGCCAAATATAGACAAAATCATTGGTTCACTTATGGATGACAATGTCCACGAAATTGGAGTGTATGGGATGAGAGGTATCTCGAGAATAGTAATGGAGGAAAAGTTATTTGATGAAGTGGTCATATCGACCATAAGGCAACTTGATGATATGCTTGGGTTGAAATTTGACCAAGAAATAGAGGAAAGAATTACCCTTATGCTACATAAAAGGTTGAAGATGGAACAAAGTATCCTCGTTGTACTTGATGATGAATGGAAGCAAAATGATTTGGAAATGATAGGAATTCCAAGCATTGAAGATCGCATATGA
Coding sequence (CDS)
GTCTGTGAAGTAACAAGAAATGTTGAAAACATAGAATCTGGTGTCCAAAATTGGTTGACCAAGACTGACTCCATCATTGAAAAATCTGAAACATTCCTAAACAACCTTTCTCAACAAGTTGTAAAGTTGGTTGATGAGGTTGTTGAGATGAAAATGAGGGAAATTTTGATAGAGTTTCCTATCAGTTCAAAGGCAAAGACTTCAGATTTTATTAACTTTGAATCAAGAAAGCCAAATATAGACAAAATCATTGGTTCACTTATGGATGACAATGTCCACGAAATTGGAGTGTATGGGATGAGAGGTATCTCGAGAATAGTAATGGAGGAAAAGTTATTTGATGAAGTGGTCATATCGACCATAAGGCAACTTGATGATATGCTTGGGTTGAAATTTGACCAAGAAATAGAGGAAAGAATTACCCTTATGCTACATAAAAGGTTGAAGATGGAACAAAGTATCCTCGTTGTACTTGATGATGAATGGAAGCAAAATGATTTGGAAATGATAGGAATTCCAAGCATTGAAGATCGCATATGA
Protein sequence
VCEVTRNVENIESGVQNWLTKTDSIIEKSETFLNNLSQQVVKLVDEVVEMKMREILIEFPISSKAKTSDFINFESRKPNIDKIIGSLMDDNVHEIGVYGMRGISRIVMEEKLFDEVVISTIRQLDDMLGLKFDQEIEERITLMLHKRLKMEQSILVVLDDEWKQNDLEMIGIPSIEDRI
Homology
BLAST of Bhi06G000803 vs. TAIR 10
Match:
AT4G27190.1 (NB-ARC domain-containing disease resistance protein )
HSP 1 Score: 45.1 bits (105), Expect = 7.1e-05
Identity = 48/205 (23.41%), Postives = 90/205 (43.90%), Query Frame = 0
Query: 15 VQNWLTKTDSIIEKSETFLN-----------NLSQQVVKLVDEV--VEMKMREILIEFPI 74
+ W + + +I K+ L +S+++VK++DEV +E E + +
Sbjct: 68 LMRWQREAEEVISKARLKLEERVSCGMSLRPRMSRKLVKILDEVKMLEKDGIEFVDMLSV 127
Query: 75 SSKAKTSDFINFES------RKPNIDKIIGSLMDDNVHEIGVYGMRGISRI----VMEEK 134
S + + + S + KI L + +IGV+GM G+ + + K
Sbjct: 128 ESTPERVEHVPGVSVVHQTMASNMLAKIRDGLTSEKAQKIGVWGMGGVGKTTLVRTLNNK 187
Query: 135 LFDE-------VVISTI-------RQLDDMLGLKFD-----QEIEERITLMLHKRLKMEQ 178
L +E +VI I R++ + + D +E EE++ ++ L E+
Sbjct: 188 LREEGATQPFGLVIFVIVSKEFDPREVQKQIAERLDIDTQMEESEEKLARRIYVGLMKER 247
BLAST of Bhi06G000803 vs. TAIR 10
Match:
AT5G43730.1 (Disease resistance protein (CC-NBS-LRR class) family )
HSP 1 Score: 44.3 bits (103), Expect = 1.2e-04
Identity = 48/167 (28.74%), Postives = 81/167 (48.50%), Query Frame = 0
Query: 35 NLSQQVVKLVDEVVEM--KMREILIEFPISSKAKTSDFINFESRKPNIDKIIG----SLM 94
N +V+K ++EV E+ K ++ I KA+ +D ++G SL+
Sbjct: 113 NYGGKVMKNLEEVKELLSKKNFEVVAQKIIPKAEKKHI----QTTVGLDTMVGIAWESLI 172
Query: 95 DDNVHEIGVYGMRGISRIVMEEKL----------FDE---VVISTIRQL----DDMLG-- 154
DD + +G+YGM GI + + E L FD VV+S QL D +LG
Sbjct: 173 DDEIRTLGLYGMGGIGKTTLLESLNNKFVELESEFDVVIWVVVSKDFQLEGIQDQILGRL 232
Query: 155 ---LKFDQEIEERITLMLHKRLKMEQSILVVLDDEWKQNDLEMIGIP 174
++++E E + +++ LK ++ +L +LDD W + DL IG+P
Sbjct: 233 RPDKEWERETESKKASLINNNLKRKKFVL-LLDDLWSEVDLIKIGVP 274
BLAST of Bhi06G000803 vs. TAIR 10
Match:
AT1G12210.1 (RPS5-like 1 )
HSP 1 Score: 43.5 bits (101), Expect = 2.1e-04
Identity = 41/160 (25.62%), Postives = 77/160 (48.12%), Query Frame = 0
Query: 37 SQQVVKLVDEVVEMKMREILIEFPISSKAKTSDFINFESRKPNIDKIIGSLMDDNVHEIG 96
SQ V +V E + E E PI S D + +DK+ LM+D V +G
Sbjct: 132 SQGVFDIVTEAAPIAEVE---ELPIQSTIVGQDSM--------LDKVWNCLMEDKVWIVG 191
Query: 97 VYGMRGISRIVMEEKL----------FDEVV------ISTIRQLDDMLGLK-------FD 156
+YGM G+ + + ++ FD V+ +T+ ++ +G K +D
Sbjct: 192 LYGMGGVGKTTLLTQINNKFSKLGGGFDVVIWVVVSKNATVHKIQKSIGEKLGLVGKNWD 251
Query: 157 QEIEERITLMLHKRLKMEQSILVVLDDEWKQNDLEMIGIP 174
++ + + L +H L+ ++ +L +LDD W++ +L++IG+P
Sbjct: 252 EKNKNQRALDIHNVLRRKKFVL-LLDDIWEKVELKVIGVP 279
BLAST of Bhi06G000803 vs. TAIR 10
Match:
AT5G43740.1 (Disease resistance protein (CC-NBS-LRR class) family )
HSP 1 Score: 42.0 bits (97), Expect = 6.0e-04
Identity = 39/170 (22.94%), Postives = 81/170 (47.65%), Query Frame = 0
Query: 35 NLSQQVVKLVDEVVEMKMREILIEFPISSKAKTSDFINFESRK-----PNIDKII----G 94
N ++V K+++EV E+ ++ + + I+ +K +DK++
Sbjct: 112 NYGEKVSKMLEEVKELLSKK-------DFRMVAQEIIHKVEKKLIQTTVGLDKLVEMAWS 171
Query: 95 SLMDDNVHEIGVYGMRGISRIVMEEKL----------FDEVVISTIRQ-------LDDML 154
SLM+D + +G+YGM G+ + + E L FD V+ + + D +L
Sbjct: 172 SLMNDEIGTLGLYGMGGVGKTTLLESLNNKFVELESEFDVVIWVVVSKDFQFEGIQDQIL 231
Query: 155 G-----LKFDQEIEERITLMLHKRLKMEQSILVVLDDEWKQNDLEMIGIP 174
G ++++E E + +++ L+ ++ +L +LDD W + D+ IG+P
Sbjct: 232 GRLRSDKEWERETESKKASLIYNNLERKKFVL-LLDDLWSEVDMTKIGVP 273
BLAST of Bhi06G000803 vs. TAIR 10
Match:
AT5G43740.2 (Disease resistance protein (CC-NBS-LRR class) family )
HSP 1 Score: 42.0 bits (97), Expect = 6.0e-04
Identity = 39/170 (22.94%), Postives = 81/170 (47.65%), Query Frame = 0
Query: 35 NLSQQVVKLVDEVVEMKMREILIEFPISSKAKTSDFINFESRK-----PNIDKII----G 94
N ++V K+++EV E+ ++ + + I+ +K +DK++
Sbjct: 112 NYGEKVSKMLEEVKELLSKK-------DFRMVAQEIIHKVEKKLIQTTVGLDKLVEMAWS 171
Query: 95 SLMDDNVHEIGVYGMRGISRIVMEEKL----------FDEVVISTIRQ-------LDDML 154
SLM+D + +G+YGM G+ + + E L FD V+ + + D +L
Sbjct: 172 SLMNDEIGTLGLYGMGGVGKTTLLESLNNKFVELESEFDVVIWVVVSKDFQFEGIQDQIL 231
Query: 155 G-----LKFDQEIEERITLMLHKRLKMEQSILVVLDDEWKQNDLEMIGIP 174
G ++++E E + +++ L+ ++ +L +LDD W + D+ IG+P
Sbjct: 232 GRLRSDKEWERETESKKASLIYNNLERKKFVL-LLDDLWSEVDMTKIGVP 273
BLAST of Bhi06G000803 vs. ExPASy Swiss-Prot
Match:
Q9T048 (Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1)
HSP 1 Score: 45.1 bits (105), Expect = 1.0e-03
Identity = 48/205 (23.41%), Postives = 90/205 (43.90%), Query Frame = 0
Query: 15 VQNWLTKTDSIIEKSETFLN-----------NLSQQVVKLVDEV--VEMKMREILIEFPI 74
+ W + + +I K+ L +S+++VK++DEV +E E + +
Sbjct: 68 LMRWQREAEEVISKARLKLEERVSCGMSLRPRMSRKLVKILDEVKMLEKDGIEFVDMLSV 127
Query: 75 SSKAKTSDFINFES------RKPNIDKIIGSLMDDNVHEIGVYGMRGISRI----VMEEK 134
S + + + S + KI L + +IGV+GM G+ + + K
Sbjct: 128 ESTPERVEHVPGVSVVHQTMASNMLAKIRDGLTSEKAQKIGVWGMGGVGKTTLVRTLNNK 187
Query: 135 LFDE-------VVISTI-------RQLDDMLGLKFD-----QEIEERITLMLHKRLKMEQ 178
L +E +VI I R++ + + D +E EE++ ++ L E+
Sbjct: 188 LREEGATQPFGLVIFVIVSKEFDPREVQKQIAERLDIDTQMEESEEKLARRIYVGLMKER 247
BLAST of Bhi06G000803 vs. ExPASy TrEMBL
Match:
A0A1S3B439 (probable disease resistance protein At4g27220 OS=Cucumis melo OX=3656 GN=LOC103485808 PE=4 SV=1)
HSP 1 Score: 216.9 bits (551), Expect = 7.1e-53
Identity = 135/224 (60.27%), Postives = 147/224 (65.62%), Query Frame = 0
Query: 1 VCEVTRNVENIESGVQNWLTKTDSIIEKSETFLNNLSQQ----------------VVKLV 60
V E RN ENIESGVQNWLTK DSIIEKSET LNNL+QQ VKL
Sbjct: 54 VNEARRNAENIESGVQNWLTKADSIIEKSETLLNNLAQQDGLCLNLVQRHKLSRKTVKLG 113
Query: 61 DEVVEMK---------MREILIEFPI-SSKAKTSDFINFESRKPNIDKIIGSLMDDNVHE 120
DEVVE+K R L+E + SSKAKTSDF+NFESRKP IDKIIG+LMDDNVH+
Sbjct: 114 DEVVEIKNEGNFDRVSYRVALLEVELESSKAKTSDFVNFESRKPTIDKIIGALMDDNVHK 173
Query: 121 IGVYGMRG---------ISRIVMEEKLFDEVVISTIR----------QLDDMLGLKFDQE 180
IGVYGM G IS++ ME KLFDEVV STI QL D LGLKFDQE
Sbjct: 174 IGVYGMGGVGKTMLVKEISKLAMERKLFDEVVTSTISQTPDIKRIQGQLGDKLGLKFDQE 233
BLAST of Bhi06G000803 vs. ExPASy TrEMBL
Match:
A0A5A7UCR2 (Putative disease resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G001990 PE=4 SV=1)
HSP 1 Score: 216.9 bits (551), Expect = 7.1e-53
Identity = 135/224 (60.27%), Postives = 147/224 (65.62%), Query Frame = 0
Query: 1 VCEVTRNVENIESGVQNWLTKTDSIIEKSETFLNNLSQQ----------------VVKLV 60
V E RN ENIESGVQNWLTK DSIIEKSET LNNL+QQ VKL
Sbjct: 54 VNEARRNAENIESGVQNWLTKADSIIEKSETLLNNLAQQDGLCLNLVQRHKLSRKTVKLG 113
Query: 61 DEVVEMK---------MREILIEFPI-SSKAKTSDFINFESRKPNIDKIIGSLMDDNVHE 120
DEVVE+K R L+E + SSKAKTSDF+NFESRKP IDKIIG+LMDDNVH+
Sbjct: 114 DEVVEIKNEGNFDRVSYRVALLEVELESSKAKTSDFVNFESRKPTIDKIIGALMDDNVHK 173
Query: 121 IGVYGMRG---------ISRIVMEEKLFDEVVISTIR----------QLDDMLGLKFDQE 180
IGVYGM G IS++ ME KLFDEVV STI QL D LGLKFDQE
Sbjct: 174 IGVYGMGGVGKTMLVKEISKLAMERKLFDEVVTSTISQTPDIKRIQGQLGDKLGLKFDQE 233
BLAST of Bhi06G000803 vs. ExPASy TrEMBL
Match:
A0A5D3DFP8 (Putative disease resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold333G00910 PE=4 SV=1)
HSP 1 Score: 216.9 bits (551), Expect = 7.1e-53
Identity = 135/224 (60.27%), Postives = 147/224 (65.62%), Query Frame = 0
Query: 1 VCEVTRNVENIESGVQNWLTKTDSIIEKSETFLNNLSQQ----------------VVKLV 60
V E RN ENIESGVQNWLTK DSIIEKSET LNNL+QQ VKL
Sbjct: 54 VNEARRNAENIESGVQNWLTKADSIIEKSETLLNNLAQQDGLCLNLVQRHKLSRKTVKLG 113
Query: 61 DEVVEMK---------MREILIEFPI-SSKAKTSDFINFESRKPNIDKIIGSLMDDNVHE 120
DEVVE+K R L+E + SSKAKTSDF+NFESRKP IDKIIG+LMDDNVH+
Sbjct: 114 DEVVEIKNEGNFDRVSYRVALLEVELESSKAKTSDFVNFESRKPTIDKIIGALMDDNVHK 173
Query: 121 IGVYGMRG---------ISRIVMEEKLFDEVVISTIR----------QLDDMLGLKFDQE 180
IGVYGM G IS++ ME KLFDEVV STI QL D LGLKFDQE
Sbjct: 174 IGVYGMGGVGKTMLVKEISKLAMERKLFDEVVTSTISQTPDIKRIQGQLGDKLGLKFDQE 233
BLAST of Bhi06G000803 vs. ExPASy TrEMBL
Match:
A0A0A0LN08 (NB-ARC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G096930 PE=4 SV=1)
HSP 1 Score: 188.0 bits (476), Expect = 3.5e-44
Identity = 119/221 (53.85%), Postives = 138/221 (62.44%), Query Frame = 0
Query: 1 VCEVTRNVENIESGVQNWLTKTDSIIEKSETFLNNLSQQ----------------VVKLV 60
V E RN E IESGVQ+WLTK DSIIE+SET L NLS+Q VKL
Sbjct: 54 VNEAIRNAEKIESGVQSWLTKVDSIIERSETLLKNLSEQGGLCLNLVQRHQLSRKAVKLA 113
Query: 61 DEVVEMKMR--------EILIEFPISSKAKTSDFINFESRKPNIDKIIGSLMDDNVHEIG 120
+EVV +K+ + + SSKAK SDF++FESRKP IDKII +LMDDNVH IG
Sbjct: 114 EEVVVIKIEGNFDKVSSPVALSEVESSKAKNSDFVDFESRKPTIDKIIAALMDDNVHTIG 173
Query: 121 VYGMRG---------ISRIVMEEKLFDEVVISTIR----------QLDDMLGLKFDQEIE 178
VYGM G IS++ ME+KLFDEV+ ST+ QL D LGL+F+QE E
Sbjct: 174 VYGMGGVGKTMLVQEISKLAMEQKLFDEVITSTVSQTPDLRRIQGQLGDKLGLRFEQETE 233
BLAST of Bhi06G000803 vs. ExPASy TrEMBL
Match:
A0A5A7VDT3 (Putative disease resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00980 PE=4 SV=1)
HSP 1 Score: 139.8 bits (351), Expect = 1.1e-29
Identity = 93/219 (42.47%), Postives = 123/219 (56.16%), Query Frame = 0
Query: 6 RNVENIESGVQNWLTKTDSIIEKSETFLNN-----------------LSQQVVKLVDEVV 65
RN E+I+ V+ WL K D + +S+ L N LS++V K+ EV+
Sbjct: 59 RNAEDIKPAVEEWLKKVDDFVRESDEILANEGGHGRLCSTNLVHRHKLSRKVSKMAYEVL 118
Query: 66 EMKMR---------EILIEFPISSKAKTSDFINFESRKPNIDKIIGSLMDDNVHEIGVYG 125
EMK + +I S K DF++F+SRKP + +I+ +L +DNVH IGV+G
Sbjct: 119 EMKNEGESFDTVSYKNVIPSADCSLPKVPDFLDFDSRKPIVKQIMDALSEDNVHRIGVHG 178
Query: 126 M---------RGISRIVMEEKLFDEVVISTIR----------QLDDMLGLKFDQEIEERI 180
M +GI R ++E K FDEVV+STI QL D LGLKF QE E
Sbjct: 179 MGGVGKTMLVKGIIRKIIESKFFDEVVMSTISQTPDFKSIQGQLADKLGLKFQQETLEGR 238
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9T048 | 1.0e-03 | 23.41 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g2719... | [more] |
Match Name | E-value | Identity | Description | |
A0A1S3B439 | 7.1e-53 | 60.27 | probable disease resistance protein At4g27220 OS=Cucumis melo OX=3656 GN=LOC1034... | [more] |
A0A5A7UCR2 | 7.1e-53 | 60.27 | Putative disease resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6... | [more] |
A0A5D3DFP8 | 7.1e-53 | 60.27 | Putative disease resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5... | [more] |
A0A0A0LN08 | 3.5e-44 | 53.85 | NB-ARC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G096930 PE=4... | [more] |
A0A5A7VDT3 | 1.1e-29 | 42.47 | Putative disease resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5... | [more] |