Bhi06G000626 (gene) Wax gourd (B227) v1

Overview


Name	Bhi06G000626
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	RING-type E3 ubiquitin transferase
Location	chr6: 16907682 .. 16908197 (-)
RNA-Seq Expression	Bhi06G000626
Synteny	Bhi06G000626

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAGACACCGACGCCACAATTTACAGCCGAAAACTCGACATTTTCCTCGTCGCAATTGGCTCCGCTGGCGCCGTCGTCACCATTTACCACTGCATCATGGCTTGTTGGTGCGATCGCCGCCGCTTCAACTCCGGTGGCCAAACACCGGCAAACGACCCTCACTCCTTGCCGATTACGGATACGCCGCGGAGCACCGAGAATTCGGTGGTTCATTTGATTCCGGCTCACAAGTATGAGAAGCGAATGGCGGTGGACGGCGGGGGTTGCGGTGGAGATCACGGCGAAGGGGATGGCACGTGCGCGATTTGTTTGAGTGAATTTGAAGAAGGGGAGGAAATAAAGACGTTGCCGGAGTGTATGCATTCGTATCACGTGCCGTGTATCGACATGTGGCTTTACTCTCACTCGAGCTGTCCGATGTGTCGTACTAATGCTACTCCGACGTCGTTTCATGATAGGCTGCAGTTTGAAACGCAGCCGAGTTCTGGGATTGTTGTGCACGTGCTTCCATGA

mRNA sequence

ATGTCAGACACCGACGCCACAATTTACAGCCGAAAACTCGACATTTTCCTCGTCGCAATTGGCTCCGCTGGCGCCGTCGTCACCATTTACCACTGCATCATGGCTTGTTGGTGCGATCGCCGCCGCTTCAACTCCGGTGGCCAAACACCGGCAAACGACCCTCACTCCTTGCCGATTACGGATACGCCGCGGAGCACCGAGAATTCGGTGGTTCATTTGATTCCGGCTCACAAGTATGAGAAGCGAATGGCGGTGGACGGCGGGGGTTGCGGTGGAGATCACGGCGAAGGGGATGGCACGTGCGCGATTTGTTTGAGTGAATTTGAAGAAGGGGAGGAAATAAAGACGTTGCCGGAGTGTATGCATTCGTATCACGTGCCGTGTATCGACATGTGGCTTTACTCTCACTCGAGCTGTCCGATGTGTCGTACTAATGCTACTCCGACGTCGTTTCATGATAGGCTGCAGTTTGAAACGCAGCCGAGTTCTGGGATTGTTGTGCACGTGCTTCCATGA

Coding sequence (CDS)

ATGTCAGACACCGACGCCACAATTTACAGCCGAAAACTCGACATTTTCCTCGTCGCAATTGGCTCCGCTGGCGCCGTCGTCACCATTTACCACTGCATCATGGCTTGTTGGTGCGATCGCCGCCGCTTCAACTCCGGTGGCCAAACACCGGCAAACGACCCTCACTCCTTGCCGATTACGGATACGCCGCGGAGCACCGAGAATTCGGTGGTTCATTTGATTCCGGCTCACAAGTATGAGAAGCGAATGGCGGTGGACGGCGGGGGTTGCGGTGGAGATCACGGCGAAGGGGATGGCACGTGCGCGATTTGTTTGAGTGAATTTGAAGAAGGGGAGGAAATAAAGACGTTGCCGGAGTGTATGCATTCGTATCACGTGCCGTGTATCGACATGTGGCTTTACTCTCACTCGAGCTGTCCGATGTGTCGTACTAATGCTACTCCGACGTCGTTTCATGATAGGCTGCAGTTTGAAACGCAGCCGAGTTCTGGGATTGTTGTGCACGTGCTTCCATGA

Protein sequence

MSDTDATIYSRKLDIFLVAIGSAGAVVTIYHCIMACWCDRRRFNSGGQTPANDPHSLPITDTPRSTENSVVHLIPAHKYEKRMAVDGGGCGGDHGEGDGTCAICLSEFEEGEEIKTLPECMHSYHVPCIDMWLYSHSSCPMCRTNATPTSFHDRLQFETQPSSGIVVHVLP

Homology

[Close]

BLAST of Bhi06G000626 vs. TAIR 10
Match: AT3G03550.1 (RING/U-box superfamily protein )

HSP 1 Score: 86.7 bits (213), Expect = 2.0e-17
Identity = 53/164 (32.32%), Postives = 87/164 (53.05%), Query Frame = 0


Query: 3   DTDATIYSRKLDIFLVAIGSAGAVVTIYHCIMACWCDRRRFNSGGQTPA----------- 62
           D+ ++ +S  L I L+ I ++  ++  Y+ +++ +C RRR NS   + A           
Sbjct: 50  DSSSSDFSPLL-IALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAAAINRISSDYTW 109

Query: 63  ---NDPHSLPITDTPRST---------ENSVVHLIPAHKYEKRMAVDGGGCGGDHGEGDG 122
              N+ ++   T+ P  T         + S++  I  +KY K   +DG     D      
Sbjct: 110 QGTNNNNNNGATN-PNQTIGGGGGDGLDESLIKSITVYKYRK---MDGFVESSD------ 169

Query: 123 TCAICLSEFEEGEEIKTLPECMHSYHVPCIDMWLYSHSSCPMCR 144
            C++CLSEF+E E ++ LP+C H++HVPCID WL SHS+CP+CR
Sbjct: 170 -CSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCR 201

[Close]

BLAST of Bhi06G000626 vs. TAIR 10
Match: AT5G17600.1 (RING/U-box superfamily protein )

HSP 1 Score: 85.9 bits (211), Expect = 3.5e-17
Identity = 46/140 (32.86%), Postives = 73/140 (52.14%), Query Frame = 0


Query: 15  IFLVAIGSAGAVVTIYHCIMACWCDRRRFNSGGQT-PANDPHSLPITDTPRSTEN----- 74
           I L+ I ++  ++  Y+ +++ +C R    S  +T   N       + T R + N     
Sbjct: 59  IALIGILTSALILVSYYTLISKYCHRHHQTSSSETLNLNHNGEGFFSSTQRISTNGDGLN 118

Query: 75  -SVVHLIPAHKYEKRMAVDGGGCGGDHGEGDGTCAICLSEFEEGEEIKTLPECMHSYHVP 134
            S++  I  +KY+           GD       C++CLSEFEE E ++ LP+C H++H+P
Sbjct: 119 ESMIKSITVYKYK----------SGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLP 178

Query: 135 CIDMWLYSHSSCPMCRTNAT 148
           CID WL SHS+CP+CR   T
Sbjct: 179 CIDTWLKSHSNCPLCRAFVT 188

[Close]

BLAST of Bhi06G000626 vs. TAIR 10
Match: AT1G04360.1 (RING/U-box superfamily protein )

HSP 1 Score: 85.5 bits (210), Expect = 4.5e-17
Identity = 43/137 (31.39%), Postives = 73/137 (53.28%), Query Frame = 0


Query: 20  IGSAGAVVTIYHCIMACWCD-------RRRFNSGGQTP--ANDPHSLPITDTPRSTENSV 79
           + +A  +V+ Y  ++ C  +       RRR  S  Q P     PH     +  R  + S 
Sbjct: 52  LATAFLLVSYYIFVIKCCLNWHQIDIFRRRRRSSDQNPLMIYSPH-----EVNRGLDESA 111

Query: 80  VHLIPAHKYEKRMAVDGGGCGGDHGEGDGTCAICLSEFEEGEEIKTLPECMHSYHVPCID 139
           +  IP  K++KR  V G     D  +    C++CL+EF+E E+++ +P C H +H+ CID
Sbjct: 112 IRAIPVFKFKKRDVVAG---EEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFHIDCID 171

Query: 140 MWLYSHSSCPMCRTNAT 148
           +WL  +++CP+CRT+ +
Sbjct: 172 IWLQGNANCPLCRTSVS 180

[Close]

BLAST of Bhi06G000626 vs. TAIR 10
Match: AT2G17450.1 (RING-H2 finger A3A )

HSP 1 Score: 84.7 bits (208), Expect = 7.7e-17
Identity = 50/148 (33.78%), Postives = 71/148 (47.97%), Query Frame = 0


Query: 2   SDTDATIYSRKLDIFLVAIGSAGAVVTIYHCIMACWCDRRRFNSGGQTPANDPHSLPITD 61
           +++D  +    L   L+ +    AVV         W   RRF +GG +P+ +        
Sbjct: 24  AESDMVVILSALLCALICVAGLAAVV------RCAWL--RRFTAGGDSPSPN-------- 83

Query: 62  TPRSTENSVVHLIPAHKYEKRMAVDGGGCGGDHGEGDGT-CAICLSEFEEGEEIKTLPEC 121
             +  +   +  +P   +    +  G        EGD T CAICL++F +GEEI+ LP C
Sbjct: 84  --KGLKKKALQSLPRSTFTAAESTSGAAA----EEGDSTECAICLTDFADGEEIRVLPLC 143

Query: 122 MHSYHVPCIDMWLYSHSSCPMCRTNATP 149
            HS+HV CID WL S SSCP CR   TP
Sbjct: 144 GHSFHVECIDKWLVSRSSCPSCRRILTP 149

[Close]

BLAST of Bhi06G000626 vs. TAIR 10
Match: AT5G43420.1 (RING/U-box superfamily protein )

HSP 1 Score: 79.3 bits (194), Expect = 3.2e-15
Identity = 35/93 (37.63%), Postives = 59/93 (63.44%), Query Frame = 0


Query: 64  RSTENSVVHLIPAHKYEKRMAVDGGGCGGDHGEGD----GTCAICLSEFEEGEEIKTLPE 123
           R  + SV+  IP  K++KR   + G   G+  E +      C++CLSEF++ E+++ +P 
Sbjct: 97  RGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQDEEKLRIIPN 156

Query: 124 CMHSYHVPCIDMWLYSHSSCPMCRTNAT-PTSF 152
           C H +H+ CID+WL ++++CP+CRT  +  TSF
Sbjct: 157 CSHLFHIDCIDVWLQNNANCPLCRTRVSCDTSF 189

[Close]

BLAST of Bhi06G000626 vs. ExPASy Swiss-Prot
Match: Q9SRQ8 (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2)

HSP 1 Score: 86.7 bits (213), Expect = 2.9e-16
Identity = 53/164 (32.32%), Postives = 87/164 (53.05%), Query Frame = 0


Query: 3   DTDATIYSRKLDIFLVAIGSAGAVVTIYHCIMACWCDRRRFNSGGQTPA----------- 62
           D+ ++ +S  L I L+ I ++  ++  Y+ +++ +C RRR NS   + A           
Sbjct: 50  DSSSSDFSPLL-IALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAAAINRISSDYTW 109

Query: 63  ---NDPHSLPITDTPRST---------ENSVVHLIPAHKYEKRMAVDGGGCGGDHGEGDG 122
              N+ ++   T+ P  T         + S++  I  +KY K   +DG     D      
Sbjct: 110 QGTNNNNNNGATN-PNQTIGGGGGDGLDESLIKSITVYKYRK---MDGFVESSD------ 169

Query: 123 TCAICLSEFEEGEEIKTLPECMHSYHVPCIDMWLYSHSSCPMCR 144
            C++CLSEF+E E ++ LP+C H++HVPCID WL SHS+CP+CR
Sbjct: 170 -CSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCR 201

[Close]

BLAST of Bhi06G000626 vs. ExPASy Swiss-Prot
Match: Q9LF64 (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 4.9e-16
Identity = 46/140 (32.86%), Postives = 73/140 (52.14%), Query Frame = 0


Query: 15  IFLVAIGSAGAVVTIYHCIMACWCDRRRFNSGGQT-PANDPHSLPITDTPRSTEN----- 74
           I L+ I ++  ++  Y+ +++ +C R    S  +T   N       + T R + N     
Sbjct: 59  IALIGILTSALILVSYYTLISKYCHRHHQTSSSETLNLNHNGEGFFSSTQRISTNGDGLN 118

Query: 75  -SVVHLIPAHKYEKRMAVDGGGCGGDHGEGDGTCAICLSEFEEGEEIKTLPECMHSYHVP 134
            S++  I  +KY+           GD       C++CLSEFEE E ++ LP+C H++H+P
Sbjct: 119 ESMIKSITVYKYK----------SGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLP 178

Query: 135 CIDMWLYSHSSCPMCRTNAT 148
           CID WL SHS+CP+CR   T
Sbjct: 179 CIDTWLKSHSNCPLCRAFVT 188

[Close]

BLAST of Bhi06G000626 vs. ExPASy Swiss-Prot
Match: P93823 (RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 6.4e-16
Identity = 43/137 (31.39%), Postives = 73/137 (53.28%), Query Frame = 0


Query: 20  IGSAGAVVTIYHCIMACWCD-------RRRFNSGGQTP--ANDPHSLPITDTPRSTENSV 79
           + +A  +V+ Y  ++ C  +       RRR  S  Q P     PH     +  R  + S 
Sbjct: 52  LATAFLLVSYYIFVIKCCLNWHQIDIFRRRRRSSDQNPLMIYSPH-----EVNRGLDESA 111

Query: 80  VHLIPAHKYEKRMAVDGGGCGGDHGEGDGTCAICLSEFEEGEEIKTLPECMHSYHVPCID 139
           +  IP  K++KR  V G     D  +    C++CL+EF+E E+++ +P C H +H+ CID
Sbjct: 112 IRAIPVFKFKKRDVVAG---EEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFHIDCID 171

Query: 140 MWLYSHSSCPMCRTNAT 148
           +WL  +++CP+CRT+ +
Sbjct: 172 IWLQGNANCPLCRTSVS 180

[Close]

BLAST of Bhi06G000626 vs. ExPASy Swiss-Prot
Match: O22755 (Probable E3 ubiquitin-protein ligase ATL44 OS=Arabidopsis thaliana OX=3702 GN=ATL44 PE=1 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.1e-15
Identity = 50/148 (33.78%), Postives = 71/148 (47.97%), Query Frame = 0


Query: 2   SDTDATIYSRKLDIFLVAIGSAGAVVTIYHCIMACWCDRRRFNSGGQTPANDPHSLPITD 61
           +++D  +    L   L+ +    AVV         W   RRF +GG +P+ +        
Sbjct: 24  AESDMVVILSALLCALICVAGLAAVV------RCAWL--RRFTAGGDSPSPN-------- 83

Query: 62  TPRSTENSVVHLIPAHKYEKRMAVDGGGCGGDHGEGDGT-CAICLSEFEEGEEIKTLPEC 121
             +  +   +  +P   +    +  G        EGD T CAICL++F +GEEI+ LP C
Sbjct: 84  --KGLKKKALQSLPRSTFTAAESTSGAAA----EEGDSTECAICLTDFADGEEIRVLPLC 143

Query: 122 MHSYHVPCIDMWLYSHSSCPMCRTNATP 149
            HS+HV CID WL S SSCP CR   TP
Sbjct: 144 GHSFHVECIDKWLVSRSSCPSCRRILTP 149

[Close]

BLAST of Bhi06G000626 vs. ExPASy Swiss-Prot
Match: Q9LRB7 (E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp. japonica OX=39947 GN=EL5.1 PE=1 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.2e-14
Identity = 42/128 (32.81%), Postives = 63/128 (49.22%), Query Frame = 0


Query: 25  AVVTIYHCIMACWCDRRR-------FNSGGQTPANDPHSLPITD--TPRSTENSVVHLIP 84
           A +T+   ++ C+CD RR        +  G+ P     S    D  T    +  V+  +P
Sbjct: 49  AALTLAFVLLQCYCDERRRAVTTTSTSGRGRRPRPRRRSGSGGDGGTGGGVDPEVLRSLP 108

Query: 85  AHKYEKRMAVDGGGCGGDHGEGDGTCAICLSEFEEGEEIKTLPECMHSYHVPCIDMWLYS 144
              Y +  A        +  +    CA+CL+E E+GEE + LP C H +H  C+DMWL S
Sbjct: 109 VTVYSRSTAAAAAKEEEEEDDDGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGS 168

[Close]

BLAST of Bhi06G000626 vs. ExPASy TrEMBL
Match: A0A5D3DI14 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold334G00280 PE=3 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 2.0e-84
Identity = 151/171 (88.30%), Postives = 159/171 (92.98%), Query Frame = 0


Query: 2   SDTDATIYSRKLDIFLVAIGSAGAVVTIYHCIMACWCDRRRFNSGGQTPANDPHSLPITD 61
           S  DA IYSRKLDIFL+AIGSAGAVVTIYHCIMACWCDRRRF SG Q+ ANDPH+LPITD
Sbjct: 4   STGDAAIYSRKLDIFLIAIGSAGAVVTIYHCIMACWCDRRRFTSGDQSSANDPHTLPITD 63

Query: 62  TPRSTENSVVHLIPAHKYEKRMAVDGGGCG-GDHGEGDGTCAICLSEFEEGEEIKTLPEC 121
           TPRSTENSVVHLIPAHKYEKRMAVDGGG G G   +GDGTCAICLSEFEEGEEIKTLPEC
Sbjct: 64  TPRSTENSVVHLIPAHKYEKRMAVDGGGGGVGKDVDGDGTCAICLSEFEEGEEIKTLPEC 123

Query: 122 MHSYHVPCIDMWLYSHSSCPMCRTNATPTSFHDRLQFETQPSSGIVVHVLP 172
            HSYH+PCIDMWLYSHSSCPMCRTNATPTSF+DRLQF+TQP+SGIVVHVLP
Sbjct: 124 KHSYHMPCIDMWLYSHSSCPMCRTNATPTSFNDRLQFQTQPNSGIVVHVLP 174

[Close]

BLAST of Bhi06G000626 vs. ExPASy TrEMBL
Match: A0A1S3C9L0 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103498194 PE=3 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 2.0e-84
Identity = 151/171 (88.30%), Postives = 159/171 (92.98%), Query Frame = 0


Query: 2   SDTDATIYSRKLDIFLVAIGSAGAVVTIYHCIMACWCDRRRFNSGGQTPANDPHSLPITD 61
           S  DA IYSRKLDIFL+AIGSAGAVVTIYHCIMACWCDRRRF SG Q+ ANDPH+LPITD
Sbjct: 4   STGDAAIYSRKLDIFLIAIGSAGAVVTIYHCIMACWCDRRRFTSGDQSSANDPHTLPITD 63

Query: 62  TPRSTENSVVHLIPAHKYEKRMAVDGGGCG-GDHGEGDGTCAICLSEFEEGEEIKTLPEC 121
           TPRSTENSVVHLIPAHKYEKRMAVDGGG G G   +GDGTCAICLSEFEEGEEIKTLPEC
Sbjct: 64  TPRSTENSVVHLIPAHKYEKRMAVDGGGGGVGKDVDGDGTCAICLSEFEEGEEIKTLPEC 123

Query: 122 MHSYHVPCIDMWLYSHSSCPMCRTNATPTSFHDRLQFETQPSSGIVVHVLP 172
            HSYH+PCIDMWLYSHSSCPMCRTNATPTSF+DRLQF+TQP+SGIVVHVLP
Sbjct: 124 KHSYHMPCIDMWLYSHSSCPMCRTNATPTSFNDRLQFQTQPNSGIVVHVLP 174

[Close]

BLAST of Bhi06G000626 vs. ExPASy TrEMBL
Match: A0A0A0KNT5 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_5G512950 PE=3 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 2.2e-83
Identity = 150/170 (88.24%), Postives = 157/170 (92.35%), Query Frame = 0


Query: 2   SDTDATIYSRKLDIFLVAIGSAGAVVTIYHCIMACWCDRRRFNSGGQTPANDPHSLPITD 61
           S  DA IYSRKLDIFL+AIGSAGAVVTIYHCIMACWCDRRRF SG Q+  NDPH+LPITD
Sbjct: 4   STGDAAIYSRKLDIFLIAIGSAGAVVTIYHCIMACWCDRRRFLSGDQSSVNDPHTLPITD 63

Query: 62  TPRSTENSVVHLIPAHKYEKRMAVDGGGCGGDHGEGDGTCAICLSEFEEGEEIKTLPECM 121
           TPRSTENSVVHLIPAHKYEKRMAVDGGG GG   +GDGTCAICLSEFEEGEEIKTLPEC 
Sbjct: 64  TPRSTENSVVHLIPAHKYEKRMAVDGGG-GGKDVDGDGTCAICLSEFEEGEEIKTLPECK 123

Query: 122 HSYHVPCIDMWLYSHSSCPMCRTNATPTSFHDRLQFETQPSSGIVVHVLP 172
           HSYH+PCIDMWLYSHSSCPMCRTNATPTSF+DRLQFETQ +SGIVVHVLP
Sbjct: 124 HSYHMPCIDMWLYSHSSCPMCRTNATPTSFNDRLQFETQSNSGIVVHVLP 172

[Close]

BLAST of Bhi06G000626 vs. ExPASy TrEMBL
Match: A0A6J1FG87 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111445137 PE=3 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 7.7e-81
Identity = 140/171 (81.87%), Postives = 155/171 (90.64%), Query Frame = 0


Query: 1   MSDTDATIYSRKLDIFLVAIGSAGAVVTIYHCIMACWCDRRRFNSGGQTPANDPHSLPIT 60
           MS +DA +YS+KLDIFL+A+GSAGAVVTIYHCIMACWCDRRR N+G QTPAND HS+ + 
Sbjct: 1   MSSSDAAVYSQKLDIFLIAVGSAGAVVTIYHCIMACWCDRRRLNAGDQTPANDLHSMSLA 60

Query: 61  DTPRSTENSVVHLIPAHKYEKRMAVDGGGCGGDHGEGDGTCAICLSEFEEGEEIKTLPEC 120
           +TPRSTENSVVHLIPAHKYEK+ AVD GGC     +GDGTCAICLSEFEEGEEI+TLPEC
Sbjct: 61  ETPRSTENSVVHLIPAHKYEKQKAVDSGGC-----DGDGTCAICLSEFEEGEEIRTLPEC 120

Query: 121 MHSYHVPCIDMWLYSHSSCPMCRTNATPTSFHDRLQFETQPSSGIVVHVLP 172
           +HSYHVPCIDMWLYSHSSCPMCRT+ATPTS HDRLQFETQPSSGI+VHV P
Sbjct: 121 LHSYHVPCIDMWLYSHSSCPMCRTDATPTSVHDRLQFETQPSSGIIVHVRP 166

[Close]

BLAST of Bhi06G000626 vs. ExPASy TrEMBL
Match: A0A6J1BX43 (RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC111006127 PE=3 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 5.2e-61
Identity = 126/177 (71.19%), Postives = 136/177 (76.84%), Query Frame = 0


Query: 1   MSDTDATIYSRKLDIFLVAIGSAGAVVTIYHCIMACWCDRRR-FNSGGQTP-ANDPHSLP 60
           MS ++A  YS KLDIFL+A+GSAG VVTIYHCIMACWCDRRR    GGQTP A D HSLP
Sbjct: 6   MSPSEAIAYSHKLDIFLIAVGSAGIVVTIYHCIMACWCDRRRPSGGGGQTPAARDLHSLP 65

Query: 61  ITDTPRSTENSVVHLIPAHKYEKRMAVDGGGCGGDHGE-GDGTCAICLSEFEEGEEIKTL 120
             +TPRSTENSVVHLIPAHKYEKRM         DH E GDGTCAICLSEFEEGE+++TL
Sbjct: 66  GLETPRSTENSVVHLIPAHKYEKRM---------DHLEVGDGTCAICLSEFEEGEDLRTL 125

Query: 121 PECMHSYHVPCIDMWLYSHSSCPMCRTNATPTS-----FHDRLQFETQPSSGIVVHV 170
           PECMHSYHVPCIDMWLYSHSSCPMCR +ATPT      F D L  E    S +VVHV
Sbjct: 126 PECMHSYHVPCIDMWLYSHSSCPMCRADATPTPSSPAVFRDGLDSE----SVVVVHV 169

The following BLAST results are available for this feature:

BLAST of Bhi06G000626 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G03550.1	2.0e-17	32.32	RING/U-box superfamily protein	[more]
AT5G17600.1	3.5e-17	32.86	RING/U-box superfamily protein	[more]
AT1G04360.1	4.5e-17	31.39	RING/U-box superfamily protein	[more]
AT2G17450.1	7.7e-17	33.78	RING-H2 finger A3A	[more]
AT5G43420.1	3.2e-15	37.63	RING/U-box superfamily protein	[more]

BLAST of Bhi06G000626 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SRQ8	2.9e-16	32.32	RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2	[more]
Q9LF64	4.9e-16	32.86	RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1	[more]
P93823	6.4e-16	31.39	RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1	[more]
O22755	1.1e-15	33.78	Probable E3 ubiquitin-protein ligase ATL44 OS=Arabidopsis thaliana OX=3702 GN=AT...	[more]
Q9LRB7	1.2e-14	32.81	E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp. japonica OX=39947 GN=EL5....	[more]

BLAST of Bhi06G000626 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DI14	2.0e-84	88.30	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3C9L0	2.0e-84	88.30	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103498194 PE=3 ...	[more]
A0A0A0KNT5	2.2e-83	88.24	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_5G512950 PE...	[more]
A0A6J1FG87	7.7e-81	81.87	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111445137...	[more]
A0A6J1BX43	5.2e-61	71.19	RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC11100612...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 101..142 e-value: 9.6E-7 score: 38.4
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 100..143 e-value: 9.4E-13 score: 48.3
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 101..143 score: 12.223724
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 56..149 e-value: 1.2E-20 score: 74.9
IPR044675	E3 ubiquitin-protein ligase RING1-like	PANTHER	PTHR45676	RING-H2 FINGER PROTEIN ATL51-RELATED	coord: 8..154
None	No IPR available	PANTHER	PTHR45676:SF43	RING-H2 FINGER PROTEIN ATL52-LIKE	coord: 8..154
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 100..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi06M000626	Bhi06M000626	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane