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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGCGGCCATTCCATCTTCCTCACTGCAATTCCCCAACTCTCTCACACTTCCTCGCAAGCCCAAGCTTCTCACCTTCGTAACCAGAGCAGCAGATCCGGAATCTCCTGCCGCCGATTCAGAATCTGGATCTGACGGCGACGATTTTGAGGACCGGTTGGCCAAAGTCCGACTCCGATACCGAAGTGGAACAGGAAAGAAAGCAGAGATACGGAAGGCTCGGAAGTCCAAGAAAGGATCTACCGCCGCCAACTCGTCGGTGTACCTGCCGCCAGTGCCGCTAAAGGAGGCGGTTTCCGGCGGACTTAAAGTGGAATTTGGATTCAGTCCGTATAGCGAGAGGATCAATGGATGGATTGCGATACTCGGAATATCGGCTCTGGTTCTGGTGGAATTAGCTACCGGAAAAGGCGTCATCAATTACCATACGCCGGCGATTATACTGATTCAAGTGTATTTTGTAGCGGCGGTTGCTGCTCTATATATCAAATACGAGAAGGAGAAGGTTAGCGTTTGGCCGCCGGATGAAATAAAAAATTAG mRNA sequence ATGGCGGCCATTCCATCTTCCTCACTGCAATTCCCCAACTCTCTCACACTTCCTCGCAAGCCCAAGCTTCTCACCTTCGTAACCAGAGCAGCAGATCCGGAATCTCCTGCCGCCGATTCAGAATCTGGATCTGACGGCGACGATTTTGAGGACCGGTTGGCCAAAGTCCGACTCCGATACCGAAGTGGAACAGGAAAGAAAGCAGAGATACGGAAGGCTCGGAAGTCCAAGAAAGGATCTACCGCCGCCAACTCGTCGGTGTACCTGCCGCCAGTGCCGCTAAAGGAGGCGGTTTCCGGCGGACTTAAAGTGGAATTTGGATTCAGTCCGTATAGCGAGAGGATCAATGGATGGATTGCGATACTCGGAATATCGGCTCTGGTTCTGGTGGAATTAGCTACCGGAAAAGGCGTCATCAATTACCATACGCCGGCGATTATACTGATTCAAGTGTATTTTGTAGCGGCGGTTGCTGCTCTATATATCAAATACGAGAAGGAGAAGGTTAGCGTTTGGCCGCCGGATGAAATAAAAAATTAG Coding sequence (CDS) ATGGCGGCCATTCCATCTTCCTCACTGCAATTCCCCAACTCTCTCACACTTCCTCGCAAGCCCAAGCTTCTCACCTTCGTAACCAGAGCAGCAGATCCGGAATCTCCTGCCGCCGATTCAGAATCTGGATCTGACGGCGACGATTTTGAGGACCGGTTGGCCAAAGTCCGACTCCGATACCGAAGTGGAACAGGAAAGAAAGCAGAGATACGGAAGGCTCGGAAGTCCAAGAAAGGATCTACCGCCGCCAACTCGTCGGTGTACCTGCCGCCAGTGCCGCTAAAGGAGGCGGTTTCCGGCGGACTTAAAGTGGAATTTGGATTCAGTCCGTATAGCGAGAGGATCAATGGATGGATTGCGATACTCGGAATATCGGCTCTGGTTCTGGTGGAATTAGCTACCGGAAAAGGCGTCATCAATTACCATACGCCGGCGATTATACTGATTCAAGTGTATTTTGTAGCGGCGGTTGCTGCTCTATATATCAAATACGAGAAGGAGAAGGTTAGCGTTTGGCCGCCGGATGAAATAAAAAATTAG Protein sequence MAAIPSSSLQFPNSLTLPRKPKLLTFVTRAADPESPAADSESGSDGDDFEDRLAKVRLRYRSGTGKKAEIRKARKSKKGSTAANSSVYLPPVPLKEAVSGGLKVEFGFSPYSERINGWIAILGISALVLVELATGKGVINYHTPAIILIQVYFVAAVAALYIKYEKEKVSVWPPDEIKN
Homology
BLAST of Bhi06G000598 vs. TAIR 10
Match: AT3G12345.1 (unknown protein; LOCATED IN: chloroplast; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 194.9 bits (494), Expect = 5.5e-50 Identity = 103/176 (58.52%), Postives = 130/176 (73.86%), Query Frame = 0
Query: 5 PSSSLQF-----PNSLTLPRKPKLLTFVTRAADPESPAADSESGSDGDDFEDRLAKVRLR 64
P SL+F PN+L + T P+ SESG+D D FE RL+ +RLR
Sbjct: 11 PFPSLRFIPAGKPNALRIFTVHATDVESTEDTQPDPETTQSESGTDPDQFESRLSNIRLR 70
Query: 65 YRSGTGKKAEIRKARKSKKGSTAANSSVYLPPVPLKEAVSGGLKVEFGFSPYSERINGWI 124
YRSGTGKKAE+RK++K GS + + +YLPPV LKEAVSGGLKVE GFSP+SERING I
Sbjct: 71 YRSGTGKKAEVRKSKKGSSGSPSKGTGIYLPPVSLKEAVSGGLKVEPGFSPFSERINGRI 130
Query: 125 AILGISALVLVELATGKGVINYHTPAIILIQVYFVAAVAALYIKYEKEKVSVWPPD 176
A LG++AL+LVELATGK V+NYHTP+++ +Q+YFVAAV+A+++K EKEKVSVWP D
Sbjct: 131 AGLGLTALLLVELATGKSVLNYHTPSVVFLQIYFVAAVSAMFVKIEKEKVSVWPKD 186
BLAST of Bhi06G000598 vs. ExPASy TrEMBL
Match: A0A0A0KS45 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G505130 PE=4 SV=1) HSP 1 Score: 303.9 bits (777), Expect = 4.4e-79 Identity = 165/185 (89.19%), Postives = 171/185 (92.43%), Query Frame = 0
Query: 1 MAAIPSSSLQFPNSLTLPR-----KPKLLTFVTRAADPESPAADSES-GSDGDDFEDRLA 60
MAAIPSSSLQFPNSLTLP KPKLLTF+TRAADPESPA DSE GSDGDDFEDRLA
Sbjct: 1 MAAIPSSSLQFPNSLTLPSNSKPPKPKLLTFLTRAADPESPAGDSEQPGSDGDDFEDRLA 60
Query: 61 KVRLRYRSGTGKKAEIRKARKSKKGSTAANSSVYLPPVPLKEAVSGGLKVEFGFSPYSER 120
KVR+RYRSGTGKKAEIRKARKSK+GST A SSVYLPPV LKEAVSGGLKVEFGFSPYSER
Sbjct: 61 KVRIRYRSGTGKKAEIRKARKSKQGSTTAASSVYLPPVSLKEAVSGGLKVEFGFSPYSER 120
Query: 121 INGWIAILGISALVLVELATGKGVINYHTPAIILIQVYFVAAVAALYIKYEKEKVSVWPP 180
INGWIAILGISALVLVELATGK VI+YHTPAIILIQVYFVAAVAA+YIKYEKEKVSVWP
Sbjct: 121 INGWIAILGISALVLVELATGKSVISYHTPAIILIQVYFVAAVAAVYIKYEKEKVSVWPS 180
BLAST of Bhi06G000598 vs. ExPASy TrEMBL
Match: A0A5D3C1D6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G002400 PE=4 SV=1) HSP 1 Score: 300.1 bits (767), Expect = 6.4e-78 Identity = 163/185 (88.11%), Postives = 169/185 (91.35%), Query Frame = 0
Query: 1 MAAIPSSSLQFPNSLTLP-----RKPKLLTFVTRAADPESPAADSES-GSDGDDFEDRLA 60
MAAIPSSSLQFPNSLTLP KP+LLTF+TRAADPES +DSE GSDGDDFEDRLA
Sbjct: 1 MAAIPSSSLQFPNSLTLPSNSKSHKPRLLTFLTRAADPESTPSDSEQPGSDGDDFEDRLA 60
Query: 61 KVRLRYRSGTGKKAEIRKARKSKKGSTAANSSVYLPPVPLKEAVSGGLKVEFGFSPYSER 120
KVR RYRSGTGKKAEIRKARKSKKGST A SSVYLPPVPLKE VSGGLKVEFGFSPYSER
Sbjct: 61 KVRFRYRSGTGKKAEIRKARKSKKGSTTAASSVYLPPVPLKEPVSGGLKVEFGFSPYSER 120
Query: 121 INGWIAILGISALVLVELATGKGVINYHTPAIILIQVYFVAAVAALYIKYEKEKVSVWPP 180
INGWIAILGISALVLVELATGK VI+YHTPAIILIQVYFVAAVAA+YIKYEKEKVSVWP
Sbjct: 121 INGWIAILGISALVLVELATGKSVISYHTPAIILIQVYFVAAVAAVYIKYEKEKVSVWPR 180
BLAST of Bhi06G000598 vs. ExPASy TrEMBL
Match: A0A6J1BZH5 (uncharacterized protein LOC111006119 OS=Momordica charantia OX=3673 GN=LOC111006119 PE=4 SV=1) HSP 1 Score: 298.5 bits (763), Expect = 1.9e-77 Identity = 160/186 (86.02%), Postives = 170/186 (91.40%), Query Frame = 0
Query: 1 MAAIPSSSLQFPNSL-----TLPRKPKLLTFVTRAADPESPAADSESGSDGDDFEDRLAK 60
MAAIPSSSLQFPNSL + P K K LTFVTRAADPE+PAAD E GSDGDDFE+RLAK
Sbjct: 1 MAAIPSSSLQFPNSLPFPSNSKPHKTKPLTFVTRAADPETPAADPEPGSDGDDFENRLAK 60
Query: 61 VRLRYRSGTGKKAEIRKARKSKKGST--AANSSVYLPPVPLKEAVSGGLKVEFGFSPYSE 120
VRL+YRSGTGKKAEIRKARKS KGST A SSVYLPPVPLKEAVSGGLKVEFGFSP+SE
Sbjct: 61 VRLKYRSGTGKKAEIRKARKSNKGSTAGAGGSSVYLPPVPLKEAVSGGLKVEFGFSPFSE 120
Query: 121 RINGWIAILGISALVLVELATGKGVINYHTPAIILIQVYFVAAVAALYIKYEKEKVSVWP 180
RINGWIAILGISALVLVELATGKGVINYHTPAIILIQVYFVAAVAA+Y+K+EKEKVSVWP
Sbjct: 121 RINGWIAILGISALVLVELATGKGVINYHTPAIILIQVYFVAAVAAVYVKFEKEKVSVWP 180
BLAST of Bhi06G000598 vs. ExPASy TrEMBL
Match: A0A1S3CJX9 (uncharacterized protein LOC103501667 OS=Cucumis melo OX=3656 GN=LOC103501667 PE=4 SV=1) HSP 1 Score: 298.5 bits (763), Expect = 1.9e-77 Identity = 162/185 (87.57%), Postives = 168/185 (90.81%), Query Frame = 0
Query: 1 MAAIPSSSLQFPNSLTLP-----RKPKLLTFVTRAADPESPAADSES-GSDGDDFEDRLA 60
MAAIPSSSLQFPNSLTLP KP+LLTF+TRAADPES +DSE GSDGDDFEDRLA
Sbjct: 1 MAAIPSSSLQFPNSLTLPSNSKSHKPRLLTFLTRAADPESTPSDSEQPGSDGDDFEDRLA 60
Query: 61 KVRLRYRSGTGKKAEIRKARKSKKGSTAANSSVYLPPVPLKEAVSGGLKVEFGFSPYSER 120
KVR RYRSGTGKKAEIRKARKSKKGST A SSVYLPPVPLKE VSGGLKVEFGFSPYSER
Sbjct: 61 KVRFRYRSGTGKKAEIRKARKSKKGSTTAASSVYLPPVPLKEPVSGGLKVEFGFSPYSER 120
Query: 121 INGWIAILGISALVLVELATGKGVINYHTPAIILIQVYFVAAVAALYIKYEKEKVSVWPP 180
INGWIAILGISALVLVELATGK VI+YHTPAIILIQVYFVAAV A+YIKYEKEKVSVWP
Sbjct: 121 INGWIAILGISALVLVELATGKSVISYHTPAIILIQVYFVAAVTAVYIKYEKEKVSVWPR 180
BLAST of Bhi06G000598 vs. ExPASy TrEMBL
Match: A0A6J1FK14 (uncharacterized protein LOC111444734 OS=Cucurbita moschata OX=3662 GN=LOC111444734 PE=4 SV=1) HSP 1 Score: 293.1 bits (749), Expect = 7.8e-76 Identity = 163/185 (88.11%), Postives = 167/185 (90.27%), Query Frame = 0
Query: 1 MAAIPSSSLQFPNSLTL-----PRKPKLLTFVTRAADPESPAADSESGSDGDDFEDRLAK 60
MAAIPSSSLQFPNSL L P KPK LTFVTRAADPESPAADSE SDGDDFEDRLA
Sbjct: 1 MAAIPSSSLQFPNSLALAFNSKPHKPKSLTFVTRAADPESPAADSEPRSDGDDFEDRLA- 60
Query: 61 VRLRYRSGTGKKAEIRKARKSKKGS-TAANSSVYLPPVPLKEAVSGGLKVEFGFSPYSER 120
RL+ R GTGKKAEIRKARKS+KGS TAA SSVYLPPVPLKEAVSGGLKVEFGFSPYSER
Sbjct: 61 -RLQLRRGTGKKAEIRKARKSRKGSTTAAASSVYLPPVPLKEAVSGGLKVEFGFSPYSER 120
Query: 121 INGWIAILGISALVLVELATGKGVINYHTPAIILIQVYFVAAVAALYIKYEKEKVSVWPP 180
INGWIAILG+SALVLVELATGKGVINYHTPAIILIQVYFVAA AALYIKYEKEKVSVWP
Sbjct: 121 INGWIAILGLSALVLVELATGKGVINYHTPAIILIQVYFVAAAAALYIKYEKEKVSVWPQ 180
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| AT3G12345.1 | 5.5e-50 | 58.52 | unknown protein; LOCATED IN: chloroplast; Has 35333 Blast hits to 34131 proteins... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KS45 | 4.4e-79 | 89.19 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G505130 PE=4 SV=1 | [more] |
| A0A5D3C1D6 | 6.4e-78 | 88.11 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A6J1BZH5 | 1.9e-77 | 86.02 | uncharacterized protein LOC111006119 OS=Momordica charantia OX=3673 GN=LOC111006... | [more] |
| A0A1S3CJX9 | 1.9e-77 | 87.57 | uncharacterized protein LOC103501667 OS=Cucumis melo OX=3656 GN=LOC103501667 PE=... | [more] |
| A0A6J1FK14 | 7.8e-76 | 88.11 | uncharacterized protein LOC111444734 OS=Cucurbita moschata OX=3662 GN=LOC1114447... | [more] |
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 28..50 |
| None | No IPR available | PANTHER | PTHR14154:SF15 | FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | coord: 20..175 |
| None | No IPR available | PANTHER | PTHR14154 | UPF0041 BRAIN PROTEIN 44-RELATED | coord: 20..175 |
| None | No IPR available | SUPERFAMILY | 103511 | Chlorophyll a-b binding protein | coord: 105..142 |
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| cellular_component |
GO:0009535 |
chloroplast thylakoid membrane |
| cellular_component |
GO:0016021 |
integral component of membrane |
|
