Bhi06G000545 (gene) Wax gourd (B227) v1

Overview
NameBhi06G000545
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
Descriptionzinc finger protein GIS-like
Locationchr6: 14520200 .. 14520382 (+)
RNA-Seq ExpressionBhi06G000545
SyntenyBhi06G000545
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGAAATTGGAAGAGATCATCAAAATTGCACTTCTGAAGCTTCTAGTATCTCCGCCACATCCGATAGCGGACCGATGACGATGAAGATGGAGATGGTTGTCGCCACTGAAATCAACGCTGGTGATCGGCAGTCACAGGAGTTCGAACTCACTGTTGTTGTTGGATCTCAAGCTTTCTAA

mRNA sequence

ATGGCTGAAATTGGAAGAGATCATCAAAATTGCACTTCTGAAGCTTCTAGTATCTCCGCCACATCCGATAGCGGACCGATGACGATGAAGATGGAGATGGTTGTCGCCACTGAAATCAACGCTGGTGATCGGCAGTCACAGGAGTTCGAACTCACTGTTGTTGTTGGATCTCAAGCTTTCTAA

Coding sequence (CDS)

ATGGCTGAAATTGGAAGAGATCATCAAAATTGCACTTCTGAAGCTTCTAGTATCTCCGCCACATCCGATAGCGGACCGATGACGATGAAGATGGAGATGGTTGTCGCCACTGAAATCAACGCTGGTGATCGGCAGTCACAGGAGTTCGAACTCACTGTTGTTGTTGGATCTCAAGCTTTCTAA

Protein sequence

MAEIGRDHQNCTSEASSISATSDSGPMTMKMEMVVATEINAGDRQSQEFELTVVVGSQAF
Homology
BLAST of Bhi06G000545 vs. ExPASy TrEMBL
Match: A0A6J1JPV7 (zinc finger protein GIS-like OS=Cucurbita maxima OX=3661 GN=LOC111487236 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 4.4e-07
Identity = 35/51 (68.63%), Postives = 39/51 (76.47%), Query Frame = 0

Query: 1  MAEIGRDHQNCTSEASSISATSDSG---PMTMKMEMVVATEINAGDRQSQE 49
          MAE G+D+ N  SEASSISA SD G   P+TMKMEM+VA EIN GDRQ QE
Sbjct: 1  MAETGKDNHNSPSEASSISAASDGGGGSPVTMKMEMIVADEINGGDRQLQE 51

BLAST of Bhi06G000545 vs. ExPASy TrEMBL
Match: A0A6J1GYN1 (zinc finger protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111458698 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 9.8e-07
Identity = 34/51 (66.67%), Postives = 38/51 (74.51%), Query Frame = 0

Query: 1  MAEIGRDHQNCTSEASSISATSD---SGPMTMKMEMVVATEINAGDRQSQE 49
          MAE G+D+ N  SEASSISA SD     P+TMKMEM+V  EIN GDRQSQE
Sbjct: 1  MAETGKDNHNSPSEASSISAASDGRSGSPVTMKMEMIVGNEINGGDRQSQE 51

BLAST of Bhi06G000545 vs. ExPASy TrEMBL
Match: A0A5A7SXX6 (Zinc finger protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G003070 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 7.0e-05
Identity = 38/55 (69.09%), Postives = 41/55 (74.55%), Query Frame = 0

Query: 1  MAEIGRDHQNCTSEASSISATSDSG-----PM-TMKMEMVVAT-EINAGDRQSQE 49
          MAE G+  QN  SEASSISATSD G     PM TMKMEMVVAT EI++ DRQSQE
Sbjct: 1  MAETGKSKQNSPSEASSISATSDGGGSSDRPMATMKMEMVVATDEISSEDRQSQE 55

BLAST of Bhi06G000545 vs. ExPASy TrEMBL
Match: A0A1S3BGD7 (zinc finger protein 1-like OS=Cucumis melo OX=3656 GN=LOC103489537 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 7.0e-05
Identity = 38/55 (69.09%), Postives = 41/55 (74.55%), Query Frame = 0

Query: 1  MAEIGRDHQNCTSEASSISATSDSG-----PM-TMKMEMVVAT-EINAGDRQSQE 49
          MAE G+  QN  SEASSISATSD G     PM TMKMEMVVAT EI++ DRQSQE
Sbjct: 1  MAETGKSKQNSPSEASSISATSDGGGSSDRPMATMKMEMVVATDEISSEDRQSQE 55

BLAST of Bhi06G000545 vs. ExPASy TrEMBL
Match: A0A0A0KT61 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G583280 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 9.1e-05
Identity = 35/53 (66.04%), Postives = 40/53 (75.47%), Query Frame = 0

Query: 1  MAEIGRDHQNCTSEASSISATSDSG----PM-TMKMEMVVATEINAGDRQSQE 49
          MAE G++ Q   SEASSISATSD G    P+ TMKMEMVVA EI++ DRQSQE
Sbjct: 1  MAETGKNKQTSPSEASSISATSDGGGSDRPLSTMKMEMVVAEEISSEDRQSQE 53

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1JPV74.4e-0768.63zinc finger protein GIS-like OS=Cucurbita maxima OX=3661 GN=LOC111487236 PE=4 SV... [more]
A0A6J1GYN19.8e-0766.67zinc finger protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111458698 PE=4 SV... [more]
A0A5A7SXX67.0e-0569.09Zinc finger protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff... [more]
A0A1S3BGD77.0e-0569.09zinc finger protein 1-like OS=Cucumis melo OX=3656 GN=LOC103489537 PE=4 SV=1[more]
A0A0A0KT619.1e-0566.04C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G583280 P... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..26

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi06M000545Bhi06M000545mRNA