Bhi06G000305 (gene) Wax gourd (B227) v1

Overview


Name	Bhi06G000305
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Vesicle transport V-snare
Location	chr6: 8024373 .. 8028633 (+)
RNA-Seq Expression	Bhi06G000305
Synteny	Bhi06G000305

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTTGTAAAGAAACAACCATAAACTGGTTGAATGGCTAAATTCCTTTATTACTCGAGACGCCGTTGGCCATCGGAGCCTAAATTCATTTGTCAACAACAAAAGTTTGGTGCTTCGTGACGGGGTCCGTGGGCATTCCAATTTTCTCGTTCTACAATTCCTCCTCCTCTGGGCTTTGCCATCTCTCATCGAATTGGGTAATCCATCGATCGATCTTTAATTCTCAGGGTCTTTCCAGAATTCATGTTGATCGGAGTGATTTTTCTTTATTGAATCCAAATTGAAGCCTCGATTTTATATTTTCCTGCGAAATTCTTATGACCAATCTTCTTTGATTGGCTTCGATCTGTTATGCAATTGAAATGCTGATTCGCTGATTTGGGCAATTTGATTTTTGAAGGTTTGGGCACGATGAGTGAGGTGTTTGAAGGATACGAACGCCAATACTGCGAGCTTTCGGCGAACCTTTCAAGAAAGTGCACTTCGGCTAGCGCCCTAAATGGAGGTATTTCCACTTTTTGATTTGTGAATTTTGGTCTCCATATGTGGTTCTTTTTTCAGGTTCCACCCCAAACTTAAATTGAAATTCATGCCTCTAAGCAGATCCTCGATGCGGAATGATAATCGAATTTGAGGTTAAAACTTGATGAAACTTTTCATTGGCTTCGACAAGAAAAACATGTACACATATTGTTAAAATCTGGATCAATTTTAAGTTCTATATAACTATGACGATCGCTCACTCACTCTTTATGATTCGTTTGTTTATTCTTGGACTGGGAAATAATTCTGAAGGTAGATAAGAAAGAGCCCACTCCGTAGGGTGCATTTTCATACGCGTTAATGATTGCTATACATTGGAAGAAGCAAATAATTTTGTTTTAAGGCTGGTTTTCGATTTATGTATCTCTCATTCAGAGTAGGAAGGAACCCAAAATCTCTCAAGGTTCTTTGATGATTATATGTTGGATATCCTATAATCACTTTGTTGGTAGATGTTGAATGATTTGTTTAATAGGTGACTATCTAGTATGATGTTCTTAAATCTGTTTGTGGGGATGACTGTTATTTCACATTCAATTTATGATCGTTGATCTAGGTGGTTTTCAGGACTTTAGCGTGATTTGTTGTTGGATGTGAACAAATTTTATACCTAAAGTATTTTTCAGTAGATGAATTTCAATATGTTTATGGTGGACAAATCAAACATACGGTTAGTTCTAATACTGATCGTAAAAACAATATTATAAATCCATTCCCTGTGGTGATGGTCCCCTGTTCAGTGCTCCCGAAACTTATGGACAAGACAGAACTTTCATGTGGGTTCTTATTGGAAGAAAAAGAAAGAGACCTTCGTTGGATGATGAAGATTCTCTTGAATTCTCCCTTTCGTGATTAAGGAAGAATTTTGTGGCATGCCTGTTTTTGTGCTATTTTGAGTGGACTGGCTTTAGAGGAATAGTAAAACTCTAAGAAGATACGATAGGGACACAACAACACATCAGTTTTTTAAAACCTAGGACAAGGACATGATGAAGACGTTTATTAAATATATACCATTTTTATATAACAAGGAAATTATGCATTTATATGCTTAAATAACTCGTTCGATGTATTTCGTTCTCAAAATTTATTTATTTTTTTTCATATATATATATCTATCAGTATACTTAACAAGAGTTCGGTGCATGTCTAACAAATATTGGATCTAGTCCCTTCAGGGACATCTGATAAAATTGAAACAAATATTGGATCTACTTTGACTTTGTACAACTAGTATCTAGCACATCCCTATTGCTCTAACAAATGTCCGATACCTATCCAACAAGTGTCGGAATGTCCAAGTGTCCTCAACACATGTTGGGCATGGATACACTAACCAAACTAAAGTGTCTATGCTTTTTATGTAGAACTTTATGAGGGATGGAAGAGTTGTTGGAGGAGGTTTAGGAGAGGGTGAGGTTTAACGGGCCCAAGGTCCGTAAATTGGGATTTTCATAAGTATCAGCTTGGTGTTATTTGTTTGAATAGGAGTCCATTTTGTAATTGGTGGAGGACTTCAATTGTGGTTTTTTTTGGAACGGGAGTATTATATTGTACGGAAAGAGAGAGAAAAAGTGTTTTCTTATTAGAAAAAAAATTAAGTGTGCGTCAAACAGAGGACTTTTTGGGCAAAGATTGTTTTCTGTTACAGCTGGTTGTTCTGTCATTGATGAGCTAATTGTTTGGAGCCGAAATTCTCCCTGTAGATTGTTTAATACTAAAATGAAGGATACTCTAACTGTGAGGAGATGAAGTGGTTCAGTCCAGGGGCTGCTCTAGCTTTAGATTTTCTATTATCTTTTCTTAGTGATGTTGAAAATTATAGATTAAATTTTTAAGATGTATTAGAGCTTTCAAATCGAACCTTCTTTTATACTTTTTCATTTAATACTAAAGAAAAATTAGACTGATATTATTTACTACGTGAATATATCATCTTACCTTCAGAGCAAAAGAAGCAAAAGGTTTCTGAAGTGAAGGCAGCAATTGATGAAGCAGAAGCTCTGGTACGTAGCTGCCTCGTCCTTGTTGTGAAAAATGCCTTCAAATTTCATGTTGCAATGTTAATGTTATATTCTTCATGATTCCTAGATTCGAAAAATGGATCTTGAGGCCAGAAGTTTGCTGCCTAACGTCAAGGCTGTCCTTCTAGCTAAATTAAGAGAGTACAAGTCTGACCTCAACAATTTGAAAAGTGAAGTTAAACGTATTGAATCTGGAAACTTAAATGCAGCCACCAGAGATGAGTTGCTGGAATCAGGCATGGCCGATACACTGACGGTATGTTTGTATTCACTGGTACTCTAATTTTTTTGGATTGTCACCGTCACATATATAAATAACTTGTTTTCTCCATCACTGCCATCTCCATAGAATCATCTAAATGTTATAAAGGTCTATAATAAAGAAAATAGAAATGAATGCACTAAACTCAGCTATCTTACTTATTTAGAAAACCAAAGCCACTAGGACCACATGCTCGCGGGAAGGACTAAGACACTGAAATTTTTTTTAGCGATTGTAAATATATCATTCCTATTATTTAGCAATTGTAAATATATCATTCTTATTATTTAGCAATTGTAAATATATCATTCCTATTATCCTATGTTTCATTTGGTTATTAAGGTTATAGCTTTTATGCTTGCCGAAATGAACATAGCTTAACTTGCATGGTGTTTGTACTATTGACCTTGAAGTTAGAGATTTGACTTCCCCACCCCACATATTGTTAAAAAAAAGAAAAAAAAGCTAAGACGTGCTTTCTCTTCCTTAACTCTTGCATTTAAGTTTTGGACCATCGTCTCTTATCCTTTGTAATTGTGTATTAGCTGTGACTCATGCCTGGTTGCCAATTCATATAGGCATCAGCTGACCAAAGATCGAGATTAATGACCACAACAGAGAGGCTAGGTAAGTCTAGTGATAGAATTAAGGAAAGTCGAAGAACCATGCTAGAAACAGAAGAACTTGGAGTTTCAATTCTCCAAGATTTGCACTCGCAGCGACAGTCTCTCTTGCATGCTCATAATACGGTATGGGATTTTACTTTTCATGTTTTCTGGGTCATCATAGGATTAGGAGTAAACGATGCTGTAGGAGCGTAGGACTTAGATTCTTCATACTTTCTTGTGATAATGATAAATCAGCCATTTTATGTAATTTCATGGCCACATCTTCGTCATGCAAACCCTTCAATGGTTTCTTTTCTAACTATATTGCTTTTGGAGTTGTGTCTGCCTGTAGTTTTTATTTGATATTTCCCACCTTATGCAGCTTCATGGAGTAGATGACAATATTGGGAAGAGTAAGAGAATTTTAACCAACATGTCTAGAAGGATGAACAAGAACAAATGGATTGTTACATCCATAATTGTTGTTCTTGTCTTGGCCATCATCCTGATATTGTACTTCAAACTTTCCAAATAGTAAGGTCATCTTCTTCATTTGGGTTTGTCATATTTGAGTGTTGTCAACATGAGTTCATGTTTTATGTATTTTTCTGGGTCTATTGGGAGTTTGTACATGGCTTATGTCATGATTAATTATTTTTTGCCTGCATCTTAATCTTCTTCAAGATTGGCGAGTGTTCACAAAACAATATTAATGTTGTAAGGTTTGCCCAACGTTTTATATTACTGTCTAATGTTCTATGGGATATTGTATTTGCTTACTTTGAGAGCTTAAATTGAGAGTCTACGGAGGTAGTTTGAGCTTA

mRNA sequence

ATTTTTGTAAAGAAACAACCATAAACTGGTTGAATGGCTAAATTCCTTTATTACTCGAGACGCCGTTGGCCATCGGAGCCTAAATTCATTTGTCAACAACAAAAGTTTGGTGCTTCGTGACGGGGTCCGTGGGCATTCCAATTTTCTCGTTCTACAATTCCTCCTCCTCTGGGCTTTGCCATCTCTCATCGAATTGGGTTTGGGCACGATGAGTGAGGTGTTTGAAGGATACGAACGCCAATACTGCGAGCTTTCGGCGAACCTTTCAAGAAAGTGCACTTCGGCTAGCGCCCTAAATGGAGAGCAAAAGAAGCAAAAGGTTTCTGAAGTGAAGGCAGCAATTGATGAAGCAGAAGCTCTGATTCGAAAAATGGATCTTGAGGCCAGAAGTTTGCTGCCTAACGTCAAGGCTGTCCTTCTAGCTAAATTAAGAGAGTACAAGTCTGACCTCAACAATTTGAAAAGTGAAGTTAAACGTATTGAATCTGGAAACTTAAATGCAGCCACCAGAGATGAGTTGCTGGAATCAGGCATGGCCGATACACTGACGGCATCAGCTGACCAAAGATCGAGATTAATGACCACAACAGAGAGGCTAGGTAAGTCTAGTGATAGAATTAAGGAAAGTCGAAGAACCATGCTAGAAACAGAAGAACTTGGAGTTTCAATTCTCCAAGATTTGCACTCGCAGCGACAGTCTCTCTTGCATGCTCATAATACGCTTCATGGAGTAGATGACAATATTGGGAAGAGTAAGAGAATTTTAACCAACATGTCTAGAAGGATGAACAAGAACAAATGGATTGTTACATCCATAATTGTTGTTCTTGTCTTGGCCATCATCCTGATATTGTACTTCAAACTTTCCAAATAGTAAGGTCATCTTCTTCATTTGGGTTTGTCATATTTGAGTGTTGTCAACATGAGTTCATGTTTTATGTATTTTTCTGGGTCTATTGGGAGTTTGTACATGGCTTATGTCATGATTAATTATTTTTTGCCTGCATCTTAATCTTCTTCAAGATTGGCGAGTGTTCACAAAACAATATTAATGTTGTAAGGTTTGCCCAACGTTTTATATTACTGTCTAATGTTCTATGGGATATTGTATTTGCTTACTTTGAGAGCTTAAATTGAGAGTCTACGGAGGTAGTTTGAGCTTA

Coding sequence (CDS)

ATGAGTGAGGTGTTTGAAGGATACGAACGCCAATACTGCGAGCTTTCGGCGAACCTTTCAAGAAAGTGCACTTCGGCTAGCGCCCTAAATGGAGAGCAAAAGAAGCAAAAGGTTTCTGAAGTGAAGGCAGCAATTGATGAAGCAGAAGCTCTGATTCGAAAAATGGATCTTGAGGCCAGAAGTTTGCTGCCTAACGTCAAGGCTGTCCTTCTAGCTAAATTAAGAGAGTACAAGTCTGACCTCAACAATTTGAAAAGTGAAGTTAAACGTATTGAATCTGGAAACTTAAATGCAGCCACCAGAGATGAGTTGCTGGAATCAGGCATGGCCGATACACTGACGGCATCAGCTGACCAAAGATCGAGATTAATGACCACAACAGAGAGGCTAGGTAAGTCTAGTGATAGAATTAAGGAAAGTCGAAGAACCATGCTAGAAACAGAAGAACTTGGAGTTTCAATTCTCCAAGATTTGCACTCGCAGCGACAGTCTCTCTTGCATGCTCATAATACGCTTCATGGAGTAGATGACAATATTGGGAAGAGTAAGAGAATTTTAACCAACATGTCTAGAAGGATGAACAAGAACAAATGGATTGTTACATCCATAATTGTTGTTCTTGTCTTGGCCATCATCCTGATATTGTACTTCAAACTTTCCAAATAG

Protein sequence

MSEVFEGYERQYCELSANLSRKCTSASALNGEQKKQKVSEVKAAIDEAEALIRKMDLEARSLLPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLTASADQRSRLMTTTERLGKSSDRIKESRRTMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNIGKSKRILTNMSRRMNKNKWIVTSIIVVLVLAIILILYFKLSK

Homology

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BLAST of Bhi06G000305 vs. TAIR 10
Match: AT5G39510.1 (Vesicle transport v-SNARE family protein )

HSP 1 Score: 316.2 bits (809), Expect = 2.0e-86
Identity = 164/221 (74.21%), Postives = 200/221 (90.50%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANLSRKCTSASALNGEQKKQKVSEVKAAIDEAEALIRKMDLEAR 60
           MS+VF+GYERQYCELSA+LS+KC+SA +L+GEQKKQK+SE+K+ ++ AE LIRKMDLEAR
Sbjct: 1   MSDVFDGYERQYCELSASLSKKCSSAISLDGEQKKQKLSEIKSGLENAEVLIRKMDLEAR 60

Query: 61  SLLPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLTASADQR 120
           +L PN+K+ LL KLRE+KSDLNN K+EVKRI SG LNAA RDELLE+GMADT TASADQR
Sbjct: 61  TLPPNLKSSLLVKLREFKSDLNNFKTEVKRITSGQLNAAARDELLEAGMADTKTASADQR 120

Query: 121 SRLMTTTERLGKSSDRIKESRRTMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNIG 180
           +RLM +TERLG+++DR+K+SRRTM+ETEE+GVSILQDLH QRQSLL AH TLHGVDDNIG
Sbjct: 121 ARLMMSTERLGRTTDRVKDSRRTMMETEEIGVSILQDLHGQRQSLLRAHETLHGVDDNIG 180

Query: 181 KSKRILTNMSRRMNKNKWIVTSIIVVLVLAIILILYFKLSK 222
           KSK+ILT+M+RRMNKNKW + +II+ L+ AI +ILYFKL+K
Sbjct: 181 KSKKILTDMTRRMNKNKWTIGAIIIALIAAIFIILYFKLTK 221

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BLAST of Bhi06G000305 vs. TAIR 10
Match: AT1G26670.1 (Vesicle transport v-SNARE family protein )

HSP 1 Score: 283.5 bits (724), Expect = 1.5e-76
Identity = 155/221 (70.14%), Postives = 184/221 (83.26%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANLSRKCTSASAL-NGEQKKQKVSEVKAAIDEAEALIRKMDLEA 60
           MS+VFEGYERQYCELS NLSRKC SAS L NGE+KK K++E+K+ IDEA+ LIRKMDLEA
Sbjct: 1   MSDVFEGYERQYCELSTNLSRKCHSASVLSNGEEKKGKIAEIKSGIDEADVLIRKMDLEA 60

Query: 61  RSLLPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLTASADQ 120
           RSL P+ KAV L+KLREYKSDLN LK E KR+ S +   ++R+EL+ESGMAD    SADQ
Sbjct: 61  RSLQPSAKAVCLSKLREYKSDLNQLKKEFKRVSSADAKPSSREELMESGMADLHAVSADQ 120

Query: 121 RSRLMTTTERLGKSSDRIKESRRTMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNI 180
           R RL  + ERL +SSDRI+ESRR MLETEE+G+SI+QDL  QRQ+LLHAHN LHGVDD I
Sbjct: 121 RGRLAMSVERLDQSSDRIRESRRLMLETEEVGISIVQDLSQQRQTLLHAHNKLHGVDDAI 180

Query: 181 GKSKRILTNMSRRMNKNKWIVTSIIVVLVLAIILILYFKLS 221
            KSK++LT MSRRM +NKWI+TS+IV LVLAIILI+ +KLS
Sbjct: 181 DKSKKVLTAMSRRMTRNKWIITSVIVALVLAIILIISYKLS 221

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BLAST of Bhi06G000305 vs. TAIR 10
Match: AT3G29100.1 (vesicle transport V-snare 13 )

HSP 1 Score: 248.1 bits (632), Expect = 6.8e-66
Identity = 132/170 (77.65%), Postives = 153/170 (90.00%), Query Frame = 0


Query: 52  IRKMDLEARSLLPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMAD 111
           ++KMDLEAR+L PNVK+ LL KLREYKSDLNN K+EVKRI SGNLNA  RDELLE+GMAD
Sbjct: 26  VKKMDLEARNLPPNVKSSLLVKLREYKSDLNNFKTEVKRITSGNLNATARDELLEAGMAD 85

Query: 112 TLTASADQRSRLMTTTERLGKSSDRIKESRRTMLETEELGVSILQDLHSQRQSLLHAHNT 171
           TLTASADQRSRLM +T+ LG+++DRIK+SRRT+LETEELGVSILQDLH QRQSLL AH T
Sbjct: 86  TLTASADQRSRLMMSTDHLGRTTDRIKDSRRTILETEELGVSILQDLHGQRQSLLRAHET 145

Query: 172 LHGVDDNIGKSKRILTNMSRRMNKNKWIVTSIIVVLVLAIILILYFKLSK 222
           LHGVDDN+GKSK+ILT M+RRMN+NKW + +II VLVLAII ILYFKL++
Sbjct: 146 LHGVDDNVGKSKKILTTMTRRMNRNKWTIGAIITVLVLAIIFILYFKLTR 195

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BLAST of Bhi06G000305 vs. TAIR 10
Match: AT3G29100.2 (vesicle transport V-snare 13 )

HSP 1 Score: 244.6 bits (623), Expect = 7.5e-65
Identity = 131/167 (78.44%), Postives = 150/167 (89.82%), Query Frame = 0


Query: 55  MDLEARSLLPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLT 114
           MDLEAR+L PNVK+ LL KLREYKSDLNN K+EVKRI SGNLNA  RDELLE+GMADTLT
Sbjct: 1   MDLEARNLPPNVKSSLLVKLREYKSDLNNFKTEVKRITSGNLNATARDELLEAGMADTLT 60

Query: 115 ASADQRSRLMTTTERLGKSSDRIKESRRTMLETEELGVSILQDLHSQRQSLLHAHNTLHG 174
           ASADQRSRLM +T+ LG+++DRIK+SRRT+LETEELGVSILQDLH QRQSLL AH TLHG
Sbjct: 61  ASADQRSRLMMSTDHLGRTTDRIKDSRRTILETEELGVSILQDLHGQRQSLLRAHETLHG 120

Query: 175 VDDNIGKSKRILTNMSRRMNKNKWIVTSIIVVLVLAIILILYFKLSK 222
           VDDN+GKSK+ILT M+RRMN+NKW + +II VLVLAII ILYFKL++
Sbjct: 121 VDDNVGKSKKILTTMTRRMNRNKWTIGAIITVLVLAIIFILYFKLTR 167

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BLAST of Bhi06G000305 vs. TAIR 10
Match: AT5G39630.1 (Vesicle transport v-SNARE family protein )

HSP 1 Score: 157.5 bits (397), Expect = 1.2e-38
Identity = 95/209 (45.45%), Postives = 143/209 (68.42%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANLSRKCTSASALNGEQKKQKVSEVKAAIDEAEALIRKMDLEAR 60
           MS VF  Y++QY ELS NLS+KC+ A +L G +KK+K+SE+   ++ AE LI KMD  A 
Sbjct: 1   MSNVFHEYDQQYSELSINLSKKCSLAFSLKGGEKKEKLSEITYDLENAEKLISKMDHAAS 60

Query: 61  SLLPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLTASADQR 120
           +L PN+K++LL KL+E KS L  L++E+KR  S NL   TR+E+LE+  AD     ADQR
Sbjct: 61  NLPPNIKSILLEKLKESKSSLKRLRNEIKRNTSENLKVTTREEVLEAEKADL----ADQR 120

Query: 121 SRLMTTTERLGKSSDRIKESRRTMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNIG 180
           SRLM +TE L ++ + IK+S+R +LETE +G+SIL++L  Q++SL ++   LH +DD + 
Sbjct: 121 SRLMKSTEGLVRTREMIKDSQRKLLETENIGISILENLQRQKESLQNSQAMLHEIDDTVK 180

Query: 181 KSKRILTNMSRRMNKNKWIVTSIIVVLVL 210
           +S+ I+ ++     K  + VT+ I++  L
Sbjct: 181 ESRSIVRSIK---IKEFFTVTAPIIIYFL 202

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BLAST of Bhi06G000305 vs. ExPASy Swiss-Prot
Match: Q9LVP9 (Vesicle transport v-SNARE 13 OS=Arabidopsis thaliana OX=3702 GN=VTI13 PE=2 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 1.5e-86
Identity = 169/221 (76.47%), Postives = 199/221 (90.05%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANLSRKCTSASALNGEQKKQKVSEVKAAIDEAEALIRKMDLEAR 60
           MS+ FE YERQYCE+SANLS+KCTSA AL+GEQKKQ +SE+K+ ++EAEAL++KMDLEAR
Sbjct: 1   MSQGFERYERQYCEISANLSKKCTSAIALDGEQKKQNLSEIKSGVEEAEALVKKMDLEAR 60

Query: 61  SLLPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLTASADQR 120
           +L PNVK+ LL KLREYKSDLNN K+EVKRI SGNLNA  RDELLE+GMADTLTASADQR
Sbjct: 61  NLPPNVKSSLLVKLREYKSDLNNFKTEVKRITSGNLNATARDELLEAGMADTLTASADQR 120

Query: 121 SRLMTTTERLGKSSDRIKESRRTMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNIG 180
           SRLM +T+ LG+++DRIK+SRRT+LETEELGVSILQDLH QRQSLL AH TLHGVDDN+G
Sbjct: 121 SRLMMSTDHLGRTTDRIKDSRRTILETEELGVSILQDLHGQRQSLLRAHETLHGVDDNVG 180

Query: 181 KSKRILTNMSRRMNKNKWIVTSIIVVLVLAIILILYFKLSK 222
           KSK+ILT M+RRMN+NKW + +II VLVLAII ILYFKL++
Sbjct: 181 KSKKILTTMTRRMNRNKWTIGAIITVLVLAIIFILYFKLTR 221

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BLAST of Bhi06G000305 vs. ExPASy Swiss-Prot
Match: Q9SEL6 (Vesicle transport v-SNARE 11 OS=Arabidopsis thaliana OX=3702 GN=VTI11 PE=1 SV=2)

HSP 1 Score: 316.2 bits (809), Expect = 2.9e-85
Identity = 164/221 (74.21%), Postives = 200/221 (90.50%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANLSRKCTSASALNGEQKKQKVSEVKAAIDEAEALIRKMDLEAR 60
           MS+VF+GYERQYCELSA+LS+KC+SA +L+GEQKKQK+SE+K+ ++ AE LIRKMDLEAR
Sbjct: 1   MSDVFDGYERQYCELSASLSKKCSSAISLDGEQKKQKLSEIKSGLENAEVLIRKMDLEAR 60

Query: 61  SLLPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLTASADQR 120
           +L PN+K+ LL KLRE+KSDLNN K+EVKRI SG LNAA RDELLE+GMADT TASADQR
Sbjct: 61  TLPPNLKSSLLVKLREFKSDLNNFKTEVKRITSGQLNAAARDELLEAGMADTKTASADQR 120

Query: 121 SRLMTTTERLGKSSDRIKESRRTMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNIG 180
           +RLM +TERLG+++DR+K+SRRTM+ETEE+GVSILQDLH QRQSLL AH TLHGVDDNIG
Sbjct: 121 ARLMMSTERLGRTTDRVKDSRRTMMETEEIGVSILQDLHGQRQSLLRAHETLHGVDDNIG 180

Query: 181 KSKRILTNMSRRMNKNKWIVTSIIVVLVLAIILILYFKLSK 222
           KSK+ILT+M+RRMNKNKW + +II+ L+ AI +ILYFKL+K
Sbjct: 181 KSKKILTDMTRRMNKNKWTIGAIIIALIAAIFIILYFKLTK 221

[Close]

BLAST of Bhi06G000305 vs. ExPASy Swiss-Prot
Match: Q9SEL5 (Vesicle transport v-SNARE 12 OS=Arabidopsis thaliana OX=3702 GN=VTI12 PE=1 SV=3)

HSP 1 Score: 283.5 bits (724), Expect = 2.1e-75
Identity = 155/221 (70.14%), Postives = 184/221 (83.26%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANLSRKCTSASAL-NGEQKKQKVSEVKAAIDEAEALIRKMDLEA 60
           MS+VFEGYERQYCELS NLSRKC SAS L NGE+KK K++E+K+ IDEA+ LIRKMDLEA
Sbjct: 1   MSDVFEGYERQYCELSTNLSRKCHSASVLSNGEEKKGKIAEIKSGIDEADVLIRKMDLEA 60

Query: 61  RSLLPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLTASADQ 120
           RSL P+ KAV L+KLREYKSDLN LK E KR+ S +   ++R+EL+ESGMAD    SADQ
Sbjct: 61  RSLQPSAKAVCLSKLREYKSDLNQLKKEFKRVSSADAKPSSREELMESGMADLHAVSADQ 120

Query: 121 RSRLMTTTERLGKSSDRIKESRRTMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNI 180
           R RL  + ERL +SSDRI+ESRR MLETEE+G+SI+QDL  QRQ+LLHAHN LHGVDD I
Sbjct: 121 RGRLAMSVERLDQSSDRIRESRRLMLETEEVGISIVQDLSQQRQTLLHAHNKLHGVDDAI 180

Query: 181 GKSKRILTNMSRRMNKNKWIVTSIIVVLVLAIILILYFKLS 221
            KSK++LT MSRRM +NKWI+TS+IV LVLAIILI+ +KLS
Sbjct: 181 DKSKKVLTAMSRRMTRNKWIITSVIVALVLAIILIISYKLS 221

[Close]

BLAST of Bhi06G000305 vs. ExPASy Swiss-Prot
Match: Q96AJ9 (Vesicle transport through interaction with t-SNAREs homolog 1A OS=Homo sapiens OX=9606 GN=VTI1A PE=1 SV=2)

HSP 1 Score: 115.9 bits (289), Expect = 5.7e-25
Identity = 71/221 (32.13%), Postives = 129/221 (58.37%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANLSRKCTSASALNGEQKKQKVSEVKAAIDEAEALIRKMDLEAR 60
           MS  FEGYE+ +  L+A ++ K      L  ++KKQ V+ V+  ++EA+ L+ +MDLE R
Sbjct: 1   MSSDFEGYEQDFAVLTAEITSKIARVPRLPPDEKKQMVANVEKQLEEAKELLEQMDLEVR 60

Query: 61  SLLPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLTASADQR 120
            + P  + +   ++R YK ++  L+++ KR        A  DE+    + D   +S +QR
Sbjct: 61  EIPPQSRGMYSNRMRSYKQEMGKLETDFKR-----SRIAYSDEVRNELLGDDGNSSENQR 120

Query: 121 SRLMTTTERLGKSSDRIKESRRTMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNIG 180
           + L+  TERL +SS R++   +  +ETE++G  +L++L   R+ +  A   L   D N+G
Sbjct: 121 AHLLDNTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKIQRARERLRETDANLG 180

Query: 181 KSKRILTNMSRRMNKNKWIVTSIIVVLVLAIILILYFKLSK 222
           KS RILT M RR+ +N+ ++  + +++V+ I++ + F + +
Sbjct: 181 KSSRILTGMLRRIIQNRILLVILGIIVVITILMAITFSVRR 216

[Close]

BLAST of Bhi06G000305 vs. ExPASy Swiss-Prot
Match: O89116 (Vesicle transport through interaction with t-SNAREs homolog 1A OS=Mus musculus OX=10090 GN=Vti1a PE=1 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 5.7e-25
Identity = 72/217 (33.18%), Postives = 127/217 (58.53%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANLSRKCTSASALNGEQKKQKVSEVKAAIDEAEALIRKMDLEAR 60
           MS  FEGYE+ +  L+A ++ K      L  ++KKQ V+ V+  ++EA  L+ +MDLE R
Sbjct: 1   MSSDFEGYEQDFAVLTAEITSKIARVPRLPPDEKKQMVANVEKQLEEARELLEQMDLEVR 60

Query: 61  SLLPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLTASADQR 120
            + P  + +   ++R YK ++  L+++ KR        A  DE+    + D   +S +QR
Sbjct: 61  EIPPQSRGMYSNRMRSYKQEMGKLETDFKR-----SRIAYSDEVRNELLGDAGNSSENQR 120

Query: 121 SRLMTTTERLGKSSDRIKESRRTMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNIG 180
           + L+  TERL +SS R++   +  +ETE++G  +L++L   R+ +  A + L   D N+G
Sbjct: 121 AHLLDNTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKIQRARDRLRDADANLG 180

Query: 181 KSKRILTNMSRRMNKNKWIVTSIIVVLVLAIILILYF 218
           KS RILT M RR+ +N+ ++  + +++V+AI+  + F
Sbjct: 181 KSSRILTGMLRRIIQNRILLVILGIIVVIAILTAIAF 212

[Close]

BLAST of Bhi06G000305 vs. ExPASy TrEMBL
Match: A0A6J1FHT9 (vesicle transport v-SNARE 13-like OS=Cucurbita moschata OX=3662 GN=LOC111445475 PE=3 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 3.4e-105
Identity = 215/221 (97.29%), Postives = 219/221 (99.10%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANLSRKCTSASALNGEQKKQKVSEVKAAIDEAEALIRKMDLEAR 60
           MSEVFEGYERQYCELSANLSRKCTSASALNGEQKKQ+VSEVK+ IDEAEALIRKMDLEAR
Sbjct: 1   MSEVFEGYERQYCELSANLSRKCTSASALNGEQKKQRVSEVKSGIDEAEALIRKMDLEAR 60

Query: 61  SLLPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLTASADQR 120
           SL PNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLTASADQR
Sbjct: 61  SLPPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLTASADQR 120

Query: 121 SRLMTTTERLGKSSDRIKESRRTMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNIG 180
           +RLMTTTERLGKSSDRIKESRRTMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNIG
Sbjct: 121 TRLMTTTERLGKSSDRIKESRRTMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNIG 180

Query: 181 KSKRILTNMSRRMNKNKWIVTSIIVVLVLAIILILYFKLSK 222
           KSKRILTNMSRRMNKNKWIVTSIIVVLVLAII+ILYFKLSK
Sbjct: 181 KSKRILTNMSRRMNKNKWIVTSIIVVLVLAIIMILYFKLSK 221

[Close]

BLAST of Bhi06G000305 vs. ExPASy TrEMBL
Match: A0A6J1K0S2 (vesicle transport v-SNARE 13 OS=Cucurbita maxima OX=3661 GN=LOC111489592 PE=3 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 2.2e-104
Identity = 214/221 (96.83%), Postives = 218/221 (98.64%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANLSRKCTSASALNGEQKKQKVSEVKAAIDEAEALIRKMDLEAR 60
           MS VFEGYERQYCELSANLSRKCTSASALNGEQKKQ+VSEVK+ IDEAEALIRKMDLEAR
Sbjct: 1   MSGVFEGYERQYCELSANLSRKCTSASALNGEQKKQRVSEVKSGIDEAEALIRKMDLEAR 60

Query: 61  SLLPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLTASADQR 120
           SL PNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLTASADQR
Sbjct: 61  SLPPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLTASADQR 120

Query: 121 SRLMTTTERLGKSSDRIKESRRTMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNIG 180
           +RLMTTTERLGKSSDRIKESRRTMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNIG
Sbjct: 121 TRLMTTTERLGKSSDRIKESRRTMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNIG 180

Query: 181 KSKRILTNMSRRMNKNKWIVTSIIVVLVLAIILILYFKLSK 222
           KSKRILTNMSRRMNKNKWIVTSIIVVLVLAII+ILYFKLSK
Sbjct: 181 KSKRILTNMSRRMNKNKWIVTSIIVVLVLAIIMILYFKLSK 221

[Close]

BLAST of Bhi06G000305 vs. ExPASy TrEMBL
Match: A0A5D3BNH0 (Vesicle transport v-SNARE 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002670 PE=3 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 3.7e-104
Identity = 214/221 (96.83%), Postives = 219/221 (99.10%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANLSRKCTSASALNGEQKKQKVSEVKAAIDEAEALIRKMDLEAR 60
           MSEVF+GYERQYCELSANLSRKCTSASALNGEQKKQKVSEVKA IDEAEALIRKMDLEAR
Sbjct: 1   MSEVFDGYERQYCELSANLSRKCTSASALNGEQKKQKVSEVKAGIDEAEALIRKMDLEAR 60

Query: 61  SLLPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLTASADQR 120
           SL PNVKAVLLAKLREYKSDLNNLKSEVKRIESG+L+AATRDELLESGMADTLTASADQR
Sbjct: 61  SLPPNVKAVLLAKLREYKSDLNNLKSEVKRIESGSLSAATRDELLESGMADTLTASADQR 120

Query: 121 SRLMTTTERLGKSSDRIKESRRTMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNIG 180
           SRLM+TTERLGKSSDRIKESRRTMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNIG
Sbjct: 121 SRLMSTTERLGKSSDRIKESRRTMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNIG 180

Query: 181 KSKRILTNMSRRMNKNKWIVTSIIVVLVLAIILILYFKLSK 222
           KSKRILTNMSRRMNKNKWIVTSIIVVLVLAIILILYFKL+K
Sbjct: 181 KSKRILTNMSRRMNKNKWIVTSIIVVLVLAIILILYFKLTK 221

[Close]

BLAST of Bhi06G000305 vs. ExPASy TrEMBL
Match: A0A1S3C9G1 (vesicle transport v-SNARE 11 OS=Cucumis melo OX=3656 GN=LOC103498506 PE=3 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 3.7e-104
Identity = 214/221 (96.83%), Postives = 219/221 (99.10%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANLSRKCTSASALNGEQKKQKVSEVKAAIDEAEALIRKMDLEAR 60
           MSEVF+GYERQYCELSANLSRKCTSASALNGEQKKQKVSEVKA IDEAEALIRKMDLEAR
Sbjct: 1   MSEVFDGYERQYCELSANLSRKCTSASALNGEQKKQKVSEVKAGIDEAEALIRKMDLEAR 60

Query: 61  SLLPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLTASADQR 120
           SL PNVKAVLLAKLREYKSDLNNLKSEVKRIESG+L+AATRDELLESGMADTLTASADQR
Sbjct: 61  SLPPNVKAVLLAKLREYKSDLNNLKSEVKRIESGSLSAATRDELLESGMADTLTASADQR 120

Query: 121 SRLMTTTERLGKSSDRIKESRRTMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNIG 180
           SRLM+TTERLGKSSDRIKESRRTMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNIG
Sbjct: 121 SRLMSTTERLGKSSDRIKESRRTMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNIG 180

Query: 181 KSKRILTNMSRRMNKNKWIVTSIIVVLVLAIILILYFKLSK 222
           KSKRILTNMSRRMNKNKWIVTSIIVVLVLAIILILYFKL+K
Sbjct: 181 KSKRILTNMSRRMNKNKWIVTSIIVVLVLAIILILYFKLTK 221

[Close]

BLAST of Bhi06G000305 vs. ExPASy TrEMBL
Match: A0A6J1BWH0 (vesicle transport v-SNARE 13-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111006334 PE=3 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 6.4e-104
Identity = 214/221 (96.83%), Postives = 217/221 (98.19%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANLSRKCTSASALNGEQKKQKVSEVKAAIDEAEALIRKMDLEAR 60
           MSEVFEGYERQYCELSANLSRKCTSASALNGEQKKQKVSEVKA ID+AEALIRKMDLEAR
Sbjct: 1   MSEVFEGYERQYCELSANLSRKCTSASALNGEQKKQKVSEVKAGIDDAEALIRKMDLEAR 60

Query: 61  SLLPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLTASADQR 120
           SL PNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLTAS DQR
Sbjct: 61  SLQPNVKAVLLAKLREYKSDLNNLKSEVKRIESGNLNAATRDELLESGMADTLTASTDQR 120

Query: 121 SRLMTTTERLGKSSDRIKESRRTMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNIG 180
           +RLMTTTERLGKSSDRIKESRRTMLETEELGVSILQDLHSQRQSLL AH+TLHGVDDNIG
Sbjct: 121 ARLMTTTERLGKSSDRIKESRRTMLETEELGVSILQDLHSQRQSLLQAHSTLHGVDDNIG 180

Query: 181 KSKRILTNMSRRMNKNKWIVTSIIVVLVLAIILILYFKLSK 222
           KSKRILTNMSRRMNKNKWIVTSIIVVLVLAIILILYFKLSK
Sbjct: 181 KSKRILTNMSRRMNKNKWIVTSIIVVLVLAIILILYFKLSK 221

The following BLAST results are available for this feature:

BLAST of Bhi06G000305 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G39510.1	2.0e-86	74.21	Vesicle transport v-SNARE family protein	[more]
AT1G26670.1	1.5e-76	70.14	Vesicle transport v-SNARE family protein	[more]
AT3G29100.1	6.8e-66	77.65	vesicle transport V-snare 13	[more]
AT3G29100.2	7.5e-65	78.44	vesicle transport V-snare 13	[more]
AT5G39630.1	1.2e-38	45.45	Vesicle transport v-SNARE family protein	[more]

BLAST of Bhi06G000305 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LVP9	1.5e-86	76.47	Vesicle transport v-SNARE 13 OS=Arabidopsis thaliana OX=3702 GN=VTI13 PE=2 SV=1	[more]
Q9SEL6	2.9e-85	74.21	Vesicle transport v-SNARE 11 OS=Arabidopsis thaliana OX=3702 GN=VTI11 PE=1 SV=2	[more]
Q9SEL5	2.1e-75	70.14	Vesicle transport v-SNARE 12 OS=Arabidopsis thaliana OX=3702 GN=VTI12 PE=1 SV=3	[more]
Q96AJ9	5.7e-25	32.13	Vesicle transport through interaction with t-SNAREs homolog 1A OS=Homo sapiens O...	[more]
O89116	5.7e-25	33.18	Vesicle transport through interaction with t-SNAREs homolog 1A OS=Mus musculus O...	[more]

BLAST of Bhi06G000305 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FHT9	3.4e-105	97.29	vesicle transport v-SNARE 13-like OS=Cucurbita moschata OX=3662 GN=LOC111445475 ...	[more]
A0A6J1K0S2	2.2e-104	96.83	vesicle transport v-SNARE 13 OS=Cucurbita maxima OX=3661 GN=LOC111489592 PE=3 SV...	[more]
A0A5D3BNH0	3.7e-104	96.83	Vesicle transport v-SNARE 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3C9G1	3.7e-104	96.83	vesicle transport v-SNARE 11 OS=Cucumis melo OX=3656 GN=LOC103498506 PE=3 SV=1	[more]
A0A6J1BWH0	6.4e-104	96.83	vesicle transport v-SNARE 13-like isoform X2 OS=Momordica charantia OX=3673 GN=L...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 31..58
None	No IPR available	COILS	Coil	Coil	coord: 67..94
None	No IPR available	PFAM	PF12352	V-SNARE_C	coord: 128..193 e-value: 6.7E-24 score: 84.0
None	No IPR available	GENE3D	1.20.5.110		coord: 117..197 e-value: 2.8E-26 score: 93.5
None	No IPR available	PANTHER	PTHR21230:SF67	VESICLE TRANSPORT V-SNARE 13-LIKE	coord: 1..220
None	No IPR available	PANTHER	PTHR21230	VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED	coord: 1..220
None	No IPR available	CDD	cd15862	SNARE_Vti1	coord: 127..188 e-value: 5.10204E-23 score: 86.0436
None	No IPR available	SUPERFAMILY	58038	SNARE fusion complex	coord: 130..189
IPR038407	Vesicle transport v-SNARE, N-terminal domain superfamily	GENE3D	1.20.58.400		coord: 1..97 e-value: 8.3E-33 score: 114.6
IPR007705	Vesicle transport v-SNARE, N-terminal	PFAM	PF05008	V-SNARE	coord: 12..90 e-value: 1.0E-24 score: 86.7
IPR027027	GOSR2/Membrin/Bos1	PIRSF	PIRSF028865	Membrin-2	coord: 1..218 e-value: 1.6E-15 score: 55.4
IPR010989	SNARE	SUPERFAMILY	47661	t-snare proteins	coord: 6..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi06M000305	Bhi06M000305	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0006906	vesicle fusion
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0012507	ER to Golgi transport vesicle membrane
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0031902	late endosome membrane
cellular_component	GO:0031201	SNARE complex
cellular_component	GO:0016020	membrane
molecular_function	GO:0005484	SNAP receptor activity
molecular_function	GO:0000149	SNARE binding