Bhi06G000153 (gene) Wax gourd (B227) v1

Overview


Name	Bhi06G000153
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Disease resistance protein (TIR-NBS-LRR class) family
Location	chr6: 3887288 .. 3887545 (+)
RNA-Seq Expression	Bhi06G000153
Synteny	Bhi06G000153

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGTTGGATCATCAACCCCTCAAAATTATTATGAGTACGATGTTTTCATAAACTTTAGAGGGGAAGATACTCGTAATACGATCGTCGGGTATTTATACGAGAAGCTCCATAAATTGGGTTTAATTACTTTTATGGATGATAAGATACCCTCAATTGGGGATGATCTTAATGAAAAGCTTGTAGACGCAGTTGAAGAGTCCAAGTTTTGCATAGTGATTTTATCTGAAAATTATGCTTCTTCCAAGTGTGCTTGA

mRNA sequence

ATGGAGGTTGGATCATCAACCCCTCAAAATTATTATGAGTACGATGTTTTCATAAACTTTAGAGGGGAAGATACTCGTAATACGATCGTCGGGTATTTATACGAGAAGCTCCATAAATTGGGTTTAATTACTTTTATGGATGATAAGATACCCTCAATTGGGGATGATCTTAATGAAAAGCTTGTAGACGCAGTTGAAGAGTCCAAGTTTTGCATAGTGATTTTATCTGAAAATTATGCTTCTTCCAAGTGTGCTTGA

Coding sequence (CDS)

ATGGAGGTTGGATCATCAACCCCTCAAAATTATTATGAGTACGATGTTTTCATAAACTTTAGAGGGGAAGATACTCGTAATACGATCGTCGGGTATTTATACGAGAAGCTCCATAAATTGGGTTTAATTACTTTTATGGATGATAAGATACCCTCAATTGGGGATGATCTTAATGAAAAGCTTGTAGACGCAGTTGAAGAGTCCAAGTTTTGCATAGTGATTTTATCTGAAAATTATGCTTCTTCCAAGTGTGCTTGA

Protein sequence

MEVGSSTPQNYYEYDVFINFRGEDTRNTIVGYLYEKLHKLGLITFMDDKIPSIGDDLNEKLVDAVEESKFCIVILSENYASSKCA

Homology

[Close]

BLAST of Bhi06G000153 vs. TAIR 10
Match: AT5G40100.1 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 84.7 bits (208), Expect = 3.8e-17
Identity = 40/81 (49.38%), Postives = 57/81 (70.37%), Query Frame = 0


Query: 3  VGSSTPQNYYEYDVFINFRGEDTRNTIVGYLYEKLHKLGLITFMDDKIPSIGDDLNEKLV 62
          + SS+      YDVF++FRGEDTR++IV +LYE L   G+ TF DDK   +GD ++E+L 
Sbjct: 1  MASSSASRASSYDVFLSFRGEDTRHSIVSHLYEALTSRGIATFKDDKRLELGDHISEELQ 60

Query: 63 DAVEESKFCIVILSENYASSK 84
           A+E S F +V+LSENY +S+
Sbjct: 61 RAIEGSDFVVVVLSENYPTSR 81

[Close]

BLAST of Bhi06G000153 vs. TAIR 10
Match: AT1G17600.1 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 83.6 bits (205), Expect = 8.5e-17
Identity = 41/81 (50.62%), Postives = 58/81 (71.60%), Query Frame = 0


Query: 3  VGSSTPQNYYEYDVFINFRGEDTRNTIVGYLYEKLHKLGLITFMDDKIPSIGDDLNEKLV 62
          V SS P+   +YDVF++FRGEDTR TIV +LY  L   G++TF DD+   IGD ++++L 
Sbjct: 2  VSSSAPR-VSKYDVFLSFRGEDTRKTIVSHLYAALDSRGIVTFKDDQRLEIGDHISDELH 61

Query: 63 DAVEESKFCIVILSENYASSK 84
           A+  S F +V+LSENYA+S+
Sbjct: 62 RALGSSSFAVVVLSENYATSR 81

[Close]

BLAST of Bhi06G000153 vs. TAIR 10
Match: AT1G72860.1 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 83.6 bits (205), Expect = 8.5e-17
Identity = 38/80 (47.50%), Postives = 59/80 (73.75%), Query Frame = 0


Query: 3  VGSSTPQNYYEYDVFINFRGEDTRNTIVGYLYEKLHKLGLITFMDDKIPSIGDDLNEKLV 62
          + SS+    ++YDVF++FRGEDTR  IV +L+++L   G++TF DDK   +GD ++E++ 
Sbjct: 1  MASSSSSPIWKYDVFLSFRGEDTRKNIVSHLHKQLVDKGVVTFKDDKKLELGDSISEEIS 60

Query: 63 DAVEESKFCIVILSENYASS 83
           A++ S + +VILSENYASS
Sbjct: 61 RAIQNSTYALVILSENYASS 80

[Close]

BLAST of Bhi06G000153 vs. TAIR 10
Match: AT4G09430.1 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 83.6 bits (205), Expect = 8.5e-17
Identity = 40/78 (51.28%), Postives = 56/78 (71.79%), Query Frame = 0


Query: 5  SSTPQNYYEYDVFINFRGEDTRNTIVGYLYEKLHKLGLITFMDDKIPSIGDDLNEKLVDA 64
          +S+P    EYDVF++FRG DTRN IV YL++ L  +G+ TF DDK    GD ++EKLV+A
Sbjct: 6  TSSPTRVKEYDVFLSFRGADTRNNIVSYLHKALVDVGIRTFKDDKELEEGDIISEKLVNA 65

Query: 65 VEESKFCIVILSENYASS 83
          ++ S F +V+LSE Y +S
Sbjct: 66 IQTSWFAVVVLSEKYVTS 83

[Close]

BLAST of Bhi06G000153 vs. TAIR 10
Match: AT1G72840.1 (Disease resistance protein (TIR-NBS-LRR class) )

HSP 1 Score: 80.1 bits (196), Expect = 9.5e-16
Identity = 40/78 (51.28%), Postives = 53/78 (67.95%), Query Frame = 0


Query: 5  SSTPQNYYEYDVFINFRGEDTRNTIVGYLYEKLHKLGLITFMDDKIPSIGDDLNEKLVDA 64
          SS+      YDVF++FRG DTR TIV +LY  L   G++TF DD+   IGD + + LV A
Sbjct: 6  SSSATRLRHYDVFLSFRGVDTRQTIVSHLYVALRNNGVLTFKDDRKLEIGDTIADGLVKA 65

Query: 65 VEESKFCIVILSENYASS 83
          ++ S F +VILSENYA+S
Sbjct: 66 IQTSWFAVVILSENYATS 83

[Close]

BLAST of Bhi06G000153 vs. ExPASy Swiss-Prot
Match: Q40392 (TMV resistance protein N OS=Nicotiana glutinosa OX=35889 GN=N PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 3.5e-15
Identity = 39/81 (48.15%), Postives = 55/81 (67.90%), Query Frame = 0


Query: 3  VGSSTPQNYYEYDVFINFRGEDTRNTIVGYLYEKLHKLGLITFMDDKIPSIGDDLNEKLV 62
          + SS+  + + YDVF++FRGEDTR T   +LYE L+  G+ TF DDK    G  +  +L 
Sbjct: 1  MASSSSSSRWSYDVFLSFRGEDTRKTFTSHLYEVLNDKGIKTFQDDKRLEYGATIPGELC 60

Query: 63 DAVEESKFCIVILSENYASSK 84
           A+EES+F IV+ SENYA+S+
Sbjct: 61 KAIEESQFAIVVFSENYATSR 81

[Close]

BLAST of Bhi06G000153 vs. ExPASy Swiss-Prot
Match: A0A290U7C4 (Disease resistance protein Roq1 OS=Nicotiana benthamiana OX=4100 GN=ROQ1 PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 3.0e-14
Identity = 37/78 (47.44%), Postives = 55/78 (70.51%), Query Frame = 0


Query: 5  SSTPQNYYEYDVFINFRGEDTRNTIVGYLYEKLHKLGLITFMDDKIPSIGDDLNEKLVDA 64
          +S+  +   YDVF++FRGEDTR T VG+L+  L + G+ TFMDDK    G  ++ +L+ A
Sbjct: 3  TSSSHHGRSYDVFLSFRGEDTRKTFVGHLFNALIEKGIHTFMDDKELKRGKSISSELMKA 62

Query: 65 VEESKFCIVILSENYASS 83
          + ES+F +V+ S+NYASS
Sbjct: 63 IGESRFAVVVFSKNYASS 80

[Close]

BLAST of Bhi06G000153 vs. ExPASy Swiss-Prot
Match: V9M398 (Disease resistance protein RUN1 OS=Vitis rotundifolia OX=103349 GN=RUN1 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 3.1e-11
Identity = 36/81 (44.44%), Postives = 52/81 (64.20%), Query Frame = 0


Query: 5  SSTPQ--NYYEYDVFINFRGEDTRNTIVGYLYEKLHKLGLITFMDDKIPSIGDDLNEKLV 64
          SSTP       YDVF++FRGEDTR     +LY  L + G+ TF DDK+   G+ +  +L+
Sbjct: 16 SSTPSIPRTITYDVFLSFRGEDTRFNFTDHLYSALGRRGIRTFRDDKLRR-GEAIAPELL 75

Query: 65 DAVEESKFCIVILSENYASSK 84
           A+EES+  +++ SENYA S+
Sbjct: 76 KAIEESRSSVIVFSENYARSR 95

[Close]

BLAST of Bhi06G000153 vs. ExPASy Swiss-Prot
Match: Q9SSN3 (Toll/interleukin-1 receptor-like protein OS=Arabidopsis thaliana OX=3702 GN=TIR PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 5.2e-11
Identity = 30/70 (42.86%), Postives = 48/70 (68.57%), Query Frame = 0


Query: 13 EYDVFINFRGEDTRNTIVGYLYEKLHKLGLITFMDDKIPSIGDDLNEKLVDAVEESKFCI 72
          +YDVF++FRG DTR+  + +LY++L +  + TF DDK    G   + +L   +E S+F +
Sbjct: 8  KYDVFLSFRGHDTRHNFISFLYKELVRRSIRTFKDDKELENGQRFSPELKSPIEVSRFAV 67

Query: 73 VILSENYASS 83
          V++SENYA+S
Sbjct: 68 VVVSENYAAS 77

[Close]

BLAST of Bhi06G000153 vs. ExPASy Swiss-Prot
Match: V9M2S5 (Disease resistance protein RPV1 OS=Vitis rotundifolia OX=103349 GN=RPV1 PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 6.8e-11
Identity = 35/81 (43.21%), Postives = 52/81 (64.20%), Query Frame = 0


Query: 5  SSTPQ--NYYEYDVFINFRGEDTRNTIVGYLYEKLHKLGLITFMDDKIPSIGDDLNEKLV 64
          SSTP       YDVF++FRGEDTR     +LY  L + G+ TF DD++   G+ +  +L+
Sbjct: 13 SSTPSIPRTTTYDVFLSFRGEDTRYNFTDHLYSALGRRGIRTFRDDRLRR-GEAIAPELL 72

Query: 65 DAVEESKFCIVILSENYASSK 84
           A+EES+  +++ SENYA S+
Sbjct: 73 KAIEESRSSVIVFSENYAHSR 92

[Close]

BLAST of Bhi06G000153 vs. ExPASy TrEMBL
Match: A0A6J1CJZ3 (toll/interleukin-1 receptor-like protein isoform X2 OS=Momordica charantia OX=3673 GN=LOC111012121 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.8e-20
Identity = 55/85 (64.71%), Postives = 67/85 (78.82%), Query Frame = 0


Query: 1  MEVGSSTPQN--YYEYDVFINFRGEDTRNTIVGYLYEKLHKLGLITFMDDKIPSIGDDLN 60
          MEV S+ P N     YDVFI+FRGEDTRN  VG+LYE L +LG++TFMDDK   IGDDL+
Sbjct: 1  MEVPSTAPPNRPRMTYDVFISFRGEDTRNNFVGFLYEDLRQLGIMTFMDDKKLLIGDDLS 60

Query: 61 EKLVDAVEESKFCIVILSENYASSK 84
          EKLV A+EES+  IV+LS++YASSK
Sbjct: 61 EKLVKAIEESRSSIVVLSKDYASSK 85

[Close]

BLAST of Bhi06G000153 vs. ExPASy TrEMBL
Match: A0A6J1CKG9 (toll/interleukin-1 receptor-like protein isoform X1 OS=Momordica charantia OX=3673 GN=LOC111012121 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.8e-20
Identity = 55/85 (64.71%), Postives = 67/85 (78.82%), Query Frame = 0


Query: 1   MEVGSSTPQN--YYEYDVFINFRGEDTRNTIVGYLYEKLHKLGLITFMDDKIPSIGDDLN 60
           MEV S+ P N     YDVFI+FRGEDTRN  VG+LYE L +LG++TFMDDK   IGDDL+
Sbjct: 46  MEVPSTAPPNRPRMTYDVFISFRGEDTRNNFVGFLYEDLRQLGIMTFMDDKKLLIGDDLS 105

Query: 61  EKLVDAVEESKFCIVILSENYASSK 84
           EKLV A+EES+  IV+LS++YASSK
Sbjct: 106 EKLVKAIEESRSSIVVLSKDYASSK 130

[Close]

BLAST of Bhi06G000153 vs. ExPASy TrEMBL
Match: A0A6J1CL15 (TMV resistance protein N-like OS=Momordica charantia OX=3673 GN=LOC111012122 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 8.4e-20
Identity = 53/85 (62.35%), Postives = 67/85 (78.82%), Query Frame = 0


Query: 1   MEVGSSTPQN--YYEYDVFINFRGEDTRNTIVGYLYEKLHKLGLITFMDDKIPSIGDDLN 60
           MEV S+ P N     YDVFI+FRGEDTRN  VG+LYE LH+LG++TFMDD+   IGDDL+
Sbjct: 44  MEVPSTAPPNRPRMTYDVFISFRGEDTRNNFVGFLYEALHQLGIMTFMDDRKLLIGDDLS 103

Query: 61  EKLVDAVEESKFCIVILSENYASSK 84
           E L+ A+EES+  IV+LS++YASSK
Sbjct: 104 ENLMKAIEESRSSIVVLSKDYASSK 128

[Close]

BLAST of Bhi06G000153 vs. ExPASy TrEMBL
Match: A0A6J1CK95 (LOW QUALITY PROTEIN: TMV resistance protein N-like OS=Momordica charantia OX=3673 GN=LOC111012057 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 8.4e-20
Identity = 55/85 (64.71%), Postives = 67/85 (78.82%), Query Frame = 0


Query: 1  MEVGSSTPQN--YYEYDVFINFRGEDTRNTIVGYLYEKLHKLGLITFMDDKIPSIGDDLN 60
          MEV S+ P N     YDVFI+FRGEDTRN  VG+LYE L +LG++TFMDDK   IGDDL+
Sbjct: 1  MEVPSTAPPNRPRMTYDVFISFRGEDTRNNFVGFLYEALCQLGIMTFMDDKKLLIGDDLS 60

Query: 61 EKLVDAVEESKFCIVILSENYASSK 84
          EKLV A+EES+  IV+LS++YASSK
Sbjct: 61 EKLVKAIEESRSSIVVLSKDYASSK 85

[Close]

BLAST of Bhi06G000153 vs. ExPASy TrEMBL
Match: A0A6J1CJ31 (TMV resistance protein N-like OS=Momordica charantia OX=3673 GN=LOC111012055 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.4e-19
Identity = 53/85 (62.35%), Postives = 66/85 (77.65%), Query Frame = 0


Query: 1   MEVGSSTPQN--YYEYDVFINFRGEDTRNTIVGYLYEKLHKLGLITFMDDKIPSIGDDLN 60
           MEV S+ P N     YDVFI+FRGEDTRN  VG+LY+ L +LG++TFMDDK   IGDDL+
Sbjct: 29  MEVSSTAPPNRPRMTYDVFISFRGEDTRNNFVGFLYQALRQLGIMTFMDDKKLLIGDDLS 88

Query: 61  EKLVDAVEESKFCIVILSENYASSK 84
           EK V A+EES+  IV+LS++YASSK
Sbjct: 89  EKFVKAIEESRSSIVVLSKDYASSK 113

The following BLAST results are available for this feature:

BLAST of Bhi06G000153 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G40100.1	3.8e-17	49.38	Disease resistance protein (TIR-NBS-LRR class) family	[more]
AT1G17600.1	8.5e-17	50.62	Disease resistance protein (TIR-NBS-LRR class) family	[more]
AT1G72860.1	8.5e-17	47.50	Disease resistance protein (TIR-NBS-LRR class) family	[more]
AT4G09430.1	8.5e-17	51.28	Disease resistance protein (TIR-NBS-LRR class) family	[more]
AT1G72840.1	9.5e-16	51.28	Disease resistance protein (TIR-NBS-LRR class)	[more]

BLAST of Bhi06G000153 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q40392	3.5e-15	48.15	TMV resistance protein N OS=Nicotiana glutinosa OX=35889 GN=N PE=1 SV=1	[more]
A0A290U7C4	3.0e-14	47.44	Disease resistance protein Roq1 OS=Nicotiana benthamiana OX=4100 GN=ROQ1 PE=1 SV...	[more]
V9M398	3.1e-11	44.44	Disease resistance protein RUN1 OS=Vitis rotundifolia OX=103349 GN=RUN1 PE=1 SV=...	[more]
Q9SSN3	5.2e-11	42.86	Toll/interleukin-1 receptor-like protein OS=Arabidopsis thaliana OX=3702 GN=TIR ...	[more]
V9M2S5	6.8e-11	43.21	Disease resistance protein RPV1 OS=Vitis rotundifolia OX=103349 GN=RPV1 PE=1 SV=...	[more]

BLAST of Bhi06G000153 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CJZ3	3.8e-20	64.71	toll/interleukin-1 receptor-like protein isoform X2 OS=Momordica charantia OX=36...	[more]
A0A6J1CKG9	3.8e-20	64.71	toll/interleukin-1 receptor-like protein isoform X1 OS=Momordica charantia OX=36...	[more]
A0A6J1CL15	8.4e-20	62.35	TMV resistance protein N-like OS=Momordica charantia OX=3673 GN=LOC111012122 PE=...	[more]
A0A6J1CK95	8.4e-20	64.71	LOW QUALITY PROTEIN: TMV resistance protein N-like OS=Momordica charantia OX=367...	[more]
A0A6J1CJ31	1.4e-19	62.35	TMV resistance protein N-like OS=Momordica charantia OX=3673 GN=LOC111012055 PE=...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	PFAM	PF01582	TIR	coord: 14..84 e-value: 8.0E-17 score: 61.6
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	PROSITE	PS50104	TIR	coord: 12..85 score: 19.985989
IPR035897	Toll/interleukin-1 receptor homology (TIR) domain superfamily	GENE3D	3.40.50.10140		coord: 7..85 e-value: 7.3E-25 score: 89.6
IPR035897	Toll/interleukin-1 receptor homology (TIR) domain superfamily	SUPERFAMILY	52200	Toll/Interleukin receptor TIR domain	coord: 5..83
None	No IPR available	PANTHER	PTHR32009:SF84	TOLL/INTERLEUKIN-LIKE RECEPTOR-PROTEIN	coord: 11..83
None	No IPR available	PANTHER	PTHR32009	TMV RESISTANCE PROTEIN N-LIKE	coord: 11..83

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi06M000153	Bhi06M000153	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
biological_process	GO:0007165	signal transduction
molecular_function	GO:0043531	ADP binding
molecular_function	GO:0003953	NAD+ nucleosidase activity