Bhi06G000099 (gene) Wax gourd (B227) v1

Overview


Name	Bhi06G000099
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	60S ribosomal protein L10-like
Location	chr6: 2386626 .. 2389171 (+)
RNA-Seq Expression	Bhi06G000099
Synteny	Bhi06G000099

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTAAGTTCACTAATTTGGGTTGGGCTTTTTACAGGGCATGTTTATGGGCCTTTAAAAAATGGGGGTTCGGCCCACTGTTCTCTAGTCCTATATATATAATAAGAATTAGGGTTTCTGGAGCCGACGGGGTCAAGTTCGAGCAGAGAGGGACGAGGTAACGCGCGATCGCCATGGGGAGAAGTACGTAAATCTTTTCGTTTCTTCATCTAATACATTCTTCCATCTTTCTAATCTGATGAATTATCTACTTGCATCTCTCAATTTTTTGTTTTTTTCTCATCTTCGATGTTAGAAACAAATTGTTCGTCGTTTTTCTGGATGCAATCTGAAAATACGTGAAGAGTGTCGTTTTTTATTGACGGAAAATTTAATTGTTGGAAATGGATGAATTTCCGTTTGTTCCCGTAGGAAAATGTTGTTTACTTTTGAGCTTGTTCTTTAATATATTGGTTTAAAGTCTTTTGACATGCGTACTTCGTTCTAGAATTGCAATATTTAAGAATGTTTGGATGATTTATCAAGTACCAAGTTGTAATCCATGTATGAAATTAATTAATTATCGTGTAGTGTTAGAATATATGTAGGACAGACTCTAAAGAAGTAAACCTTGCACCTGGTTTCCACGTTGTACTATTCACGGATTAGGGTTTTTTTTCTCTACATCTGAAGGAATCTTGGTACTGTTTTGATTTAATTGCTTTTCAGTTGTGAGCGCTTATTATTTAACAGGAGGCATTTTCTCGCTGGAAAATTTCTGGGTTATGAAAATGGATGTGTGCTTAGCAAGGTTTTCATCATGTTTTTTTTCTTGAGTTGAATCTCTATGGACATCATTATTTATCCTGATGCTCTTGTATGAATAGCCACAGTCCTGAATAACTTTTTTCGACAACTCATTTTGATTATAACTTGGTCTTGATAATTCTATGCTGGTTCTAATTTAACTACAAGGTTGTTGCATGTTATTCATTTCCCGTGCATTTTTATTGTAGGACCTGCAAGGTGTTACAGGCAAATTAAAAATAAGCCTTATCCAAAATCCAGATTTTGTCGTGGTGTCCCCGATCCCAAGATCAGGATCTATGATGTTGGAATGAAAAAGAAGGGTGTGGATGAATTTCCCTTTTGTGTTCACTTAGTGAGTTGGGAGAAAGAAAACGTGTCCAGTGAGGCTTTGGAAGCTGCTAGAATTGCCTGCAACAAATACATGGCTAAGTTCGCTGGGAAGGATGCATTCCACTTGAGAGTCAGGGTGCACCCCTTCCATGTTCTTCGAATTAATAAGATGCTTTCATGTGCTGGGGCTGATAGGCTCCAGACTGGTATGAGAGGTGCTTTTGGCAAACCACAAGGTACCTGTGCAAGAGTAGCCATTGGTCAGGTTCTTCTTTCGGTTCGGTGCAAGGATAGTAACAGCCAACATGCACAGGAGGCCCTCCGTCGTGCTAAGTTCAAATTCCCTGGTCGCCAGAAGATCATTGTCAGCAGGAAGTGGTATGCCCCAAGAGATCTTTGCATTTTTTTCCTTCTTGTTCAGCTAAATTCCCTTGTGGGTCATTCATGTTGTTTTTTAGTGCCTCTGTTTCTTGTGGAGTAATTAAATCTTAAATGTTACCCATATATGAGTCTTATTGATTAAATGATAAATTCTTCAAATTTCCCTTTCAGGGGATTCACTAAATTCAGCCGGGCTGATTATCTGGCTTACAAGGCAGAGAACAAAATCCTCCCAGATGGTGTTAACGCCAAGGTAAGCTATATTACATTCAGCCATATGCTTGCTTTCCTGTTTTATTAATTAATTGAATGTCTTTGATTTTTTTTTTTCCTATTTTGCAAGCACATAAATGGATGTAGGGTTAGCTAGGAGTATGAGATGCTACTTTTCTTTTTCTATTGTATAAATTTAAACTCGTCAAAAATCATCTGAAGAGCATTGATATTCCTTGGATGCACATCCTTTTTTTAAATTTCGGTTTTTCTTCTCTTATATCTCAGTGGAAGACCCTTTTTTACTCTCTCCTTGATAGGACCTTATTGTTTTGTAATCATTTCACATCATTACGAATTTGTCTCATCATTTATGTTTCCTGATTAAAAAAAAATCATAATAACAAATATGGAACATAAAGCAGCATTTTATGTTCAATTTGCGTATTTATCAGCTAATGGGGTTGCAACTGAACTTTTCAGCTCCTTGGATGCCATGGGCCTTTAGCAAATCGTCAACCTGGAAGAGCTTTTCTACCTCAAGCAGCCTAAGATCAGCTAGTTGTTTCTTTTTGATGTTGCAGTTTTTTTCGATTTTGACGCTTGAATCTTTATCATCATATTTTGTTTGTATTAACTCCACATTATCCCGGCAGTTTTATTGATCTTAAAGCAAAGGTAGTAGGGATCACAACCACTTCCTCTTTCCTTCCTCCGTTGATTTAAAATTTTATTCTCTCTTACAAACTGGTCAACTTTAAATTATCAATTTTGAAAACACGGGACTTAAAAAAAAATGAAGTTGTAGTTCATGTTTTAACATGTAAAGGTAGC

mRNA sequence

TTTTAAGTTCACTAATTTGGGTTGGGCTTTTTACAGGGCATGTTTATGGGCCTTTAAAAAATGGGGGTTCGGCCCACTGTTCTCTAGTCCTATATATATAATAAGAATTAGGGTTTCTGGAGCCGACGGGGTCAAGTTCGAGCAGAGAGGGACGAGGTAACGCGCGATCGCCATGGGGAGAAGACCTGCAAGGTGTTACAGGCAAATTAAAAATAAGCCTTATCCAAAATCCAGATTTTGTCGTGGTGTCCCCGATCCCAAGATCAGGATCTATGATGTTGGAATGAAAAAGAAGGGTGTGGATGAATTTCCCTTTTGTGTTCACTTAGTGAGTTGGGAGAAAGAAAACGTGTCCAGTGAGGCTTTGGAAGCTGCTAGAATTGCCTGCAACAAATACATGGCTAAGTTCGCTGGGAAGGATGCATTCCACTTGAGAGTCAGGGTGCACCCCTTCCATGTTCTTCGAATTAATAAGATGCTTTCATGTGCTGGGGCTGATAGGCTCCAGACTGGTATGAGAGGTGCTTTTGGCAAACCACAAGGTACCTGTGCAAGAGTAGCCATTGGTCAGGTTCTTCTTTCGGTTCGGTGCAAGGATAGTAACAGCCAACATGCACAGGAGGCCCTCCGTCGTGCTAAGTTCAAATTCCCTGGTCGCCAGAAGATCATTGTCAGCAGGAAGTGGGGATTCACTAAATTCAGCCGGGCTGATTATCTGGCTTACAAGGCAGAGAACAAAATCCTCCCAGATGGTGTTAACGCCAAGCTCCTTGGATGCCATGGGCCTTTAGCAAATCGTCAACCTGGAAGAGCTTTTCTACCTCAAGCAGCCTAAGATCAGCTAGTTGTTTCTTTTTGATGTTGCAGTTTTTTTCGATTTTGACGCTTGAATCTTTATCATCATATTTTGTTTGTATTAACTCCACATTATCCCGGCAGTTTTATTGATCTTAAAGCAAAGGTAGTAGGGATCACAACCACTTCCTCTTTCCTTCCTCCGTTGATTTAAAATTTTATTCTCTCTTACAAACTGGTCAACTTTAAATTATCAATTTTGAAAACACGGGACTTAAAAAAAAATGAAGTTGTAGTTCATGTTTTAACATGTAAAGGTAGC

Coding sequence (CDS)

ATGGGGAGAAGACCTGCAAGGTGTTACAGGCAAATTAAAAATAAGCCTTATCCAAAATCCAGATTTTGTCGTGGTGTCCCCGATCCCAAGATCAGGATCTATGATGTTGGAATGAAAAAGAAGGGTGTGGATGAATTTCCCTTTTGTGTTCACTTAGTGAGTTGGGAGAAAGAAAACGTGTCCAGTGAGGCTTTGGAAGCTGCTAGAATTGCCTGCAACAAATACATGGCTAAGTTCGCTGGGAAGGATGCATTCCACTTGAGAGTCAGGGTGCACCCCTTCCATGTTCTTCGAATTAATAAGATGCTTTCATGTGCTGGGGCTGATAGGCTCCAGACTGGTATGAGAGGTGCTTTTGGCAAACCACAAGGTACCTGTGCAAGAGTAGCCATTGGTCAGGTTCTTCTTTCGGTTCGGTGCAAGGATAGTAACAGCCAACATGCACAGGAGGCCCTCCGTCGTGCTAAGTTCAAATTCCCTGGTCGCCAGAAGATCATTGTCAGCAGGAAGTGGGGATTCACTAAATTCAGCCGGGCTGATTATCTGGCTTACAAGGCAGAGAACAAAATCCTCCCAGATGGTGTTAACGCCAAGCTCCTTGGATGCCATGGGCCTTTAGCAAATCGTCAACCTGGAAGAGCTTTTCTACCTCAAGCAGCCTAA

Protein sequence

MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQAA

Homology

[Close]

BLAST of Bhi06G000099 vs. TAIR 10
Match: AT1G14320.1 (Ribosomal protein L16p/L10e family protein )

HSP 1 Score: 407.5 bits (1046), Expect = 6.7e-114
Identity = 191/217 (88.02%), Postives = 202/217 (93.09%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           K  GTCARVAIGQVLLSVRCKD++  HAQEALRRAKFKFPGRQKIIVSRKWGFTKF+RAD
Sbjct: 121 KALGTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAD 180

Query: 181 YLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLP 218
           +   + E +++PDGVNAK L CHGPLANRQPG AFLP
Sbjct: 181 FTKLRQEKRVVPDGVNAKFLSCHGPLANRQPGSAFLP 217

[Close]

BLAST of Bhi06G000099 vs. TAIR 10
Match: AT1G26910.1 (Ribosomal protein L16p/L10e family protein )

HSP 1 Score: 406.4 bits (1043), Expect = 1.5e-113
Identity = 192/220 (87.27%), Postives = 202/220 (91.82%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFP+CVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPYCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           K  GTCARVAIGQVLLSVRCKD++  HAQEALRRAKFKFPGRQKIIVSRKWGFTKF+RAD
Sbjct: 121 KALGTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAD 180

Query: 181 YLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQAA 221
           Y   + E +I+PDGVNAK L CHGPLANRQPG AFL   A
Sbjct: 181 YTKLRQEKRIVPDGVNAKFLSCHGPLANRQPGSAFLSAGA 220

[Close]

BLAST of Bhi06G000099 vs. TAIR 10
Match: AT1G66580.1 (senescence associated gene 24 )

HSP 1 Score: 398.7 bits (1023), Expect = 3.1e-111
Identity = 189/216 (87.50%), Postives = 200/216 (92.59%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           K  GTCARVAIGQVLLSVRCKD++  HAQEALRRAKFKFPGRQKIIVSRKWGFTKF+RA+
Sbjct: 121 KALGTCARVAIGQVLLSVRCKDNHGVHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAE 180

Query: 181 YLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFL 217
           Y   +A  +I+PDGVNAK L  HGPLANRQPG AF+
Sbjct: 181 YTKLRAMKRIVPDGVNAKFLSNHGPLANRQPGSAFI 216

[Close]

BLAST of Bhi06G000099 vs. TAIR 10
Match: AT1G14320.2 (Ribosomal protein L16p/L10e family protein )

HSP 1 Score: 275.8 bits (704), Expect = 3.0e-74
Identity = 139/217 (64.06%), Postives = 149/217 (68.66%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM                                            
Sbjct: 61  SSEALEAARIACNKYM-------------------------------------------- 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
                        VLLSVRCKD++  HAQEALRRAKFKFPGRQKIIVSRKWGFTKF+RAD
Sbjct: 121 -------------VLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAD 160

Query: 181 YLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLP 218
           +   + E +++PDGVNAK L CHGPLANRQPG AFLP
Sbjct: 181 FTKLRQEKRVVPDGVNAKFLSCHGPLANRQPGSAFLP 160

[Close]

BLAST of Bhi06G000099 vs. ExPASy Swiss-Prot
Match: Q9SPB3 (60S ribosomal protein L10 OS=Vitis riparia OX=96939 GN=RPL10 PE=2 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 8.8e-119
Identity = 199/216 (92.13%), Postives = 210/216 (97.22%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM K+AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           KPQGTCARV+IGQVLLSVRCKD NS HAQEALRRAKFKFP RQKIIVSRKWGFTKF+R D
Sbjct: 121 KPQGTCARVSIGQVLLSVRCKDGNSHHAQEALRRAKFKFPARQKIIVSRKWGFTKFNRTD 180

Query: 181 YLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFL 217
           Y+ +K++N+ILPDGVNAKLLGCHGPLANRQPG+AF+
Sbjct: 181 YIKWKSQNRILPDGVNAKLLGCHGPLANRQPGKAFI 216

[Close]

BLAST of Bhi06G000099 vs. ExPASy Swiss-Prot
Match: P93847 (60S ribosomal protein L10 OS=Solanum melongena OX=4111 GN=RPL10 PE=2 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 4.4e-118
Identity = 203/216 (93.98%), Postives = 207/216 (95.83%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM K AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           KPQG CARVAIGQVLLSVRCKD NS HAQEALRRAKFKFPGRQKIIVSRKWGFTKFSR D
Sbjct: 121 KPQGVCARVAIGQVLLSVRCKDGNSNHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTD 180

Query: 181 YLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFL 217
           YL YK+EN+I+PDGVNAKLLG HGPLA RQPGRAFL
Sbjct: 181 YLKYKSENRIVPDGVNAKLLGNHGPLAARQPGRAFL 216

[Close]

BLAST of Bhi06G000099 vs. ExPASy Swiss-Prot
Match: Q9M5M7 (60S ribosomal protein L10 OS=Euphorbia esula OX=3993 GN=RPL10 PE=2 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 2.2e-117
Identity = 202/220 (91.82%), Postives = 209/220 (95.00%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM KFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           KPQG CARVAIGQVLLSVRCKD+NS +AQEALRRAKFKFPGRQKIIVSRKWGFTK +RAD
Sbjct: 121 KPQGVCARVAIGQVLLSVRCKDNNSHNAQEALRRAKFKFPGRQKIIVSRKWGFTKINRAD 180

Query: 181 YLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQAA 221
           Y   K+EN+ILPDGVNAKLLGCHG LANR+PGRAF+   A
Sbjct: 181 YPRLKSENRILPDGVNAKLLGCHGRLANRKPGRAFIDAVA 220

[Close]

BLAST of Bhi06G000099 vs. ExPASy Swiss-Prot
Match: Q93VT9 (60S ribosomal protein L10-1 OS=Arabidopsis thaliana OX=3702 GN=RPL10A PE=1 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 9.4e-113
Identity = 191/217 (88.02%), Postives = 202/217 (93.09%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           K  GTCARVAIGQVLLSVRCKD++  HAQEALRRAKFKFPGRQKIIVSRKWGFTKF+RAD
Sbjct: 121 KALGTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAD 180

Query: 181 YLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLP 218
           +   + E +++PDGVNAK L CHGPLANRQPG AFLP
Sbjct: 181 FTKLRQEKRVVPDGVNAKFLSCHGPLANRQPGSAFLP 217

[Close]

BLAST of Bhi06G000099 vs. ExPASy Swiss-Prot
Match: Q08770 (60S ribosomal protein L10-2 OS=Arabidopsis thaliana OX=3702 GN=RPL10B PE=2 SV=2)

HSP 1 Score: 406.4 bits (1043), Expect = 2.1e-112
Identity = 192/220 (87.27%), Postives = 202/220 (91.82%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFP+CVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPYCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           K  GTCARVAIGQVLLSVRCKD++  HAQEALRRAKFKFPGRQKIIVSRKWGFTKF+RAD
Sbjct: 121 KALGTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAD 180

Query: 181 YLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQAA 221
           Y   + E +I+PDGVNAK L CHGPLANRQPG AFL   A
Sbjct: 181 YTKLRQEKRIVPDGVNAKFLSCHGPLANRQPGSAFLSAGA 220

[Close]

BLAST of Bhi06G000099 vs. ExPASy TrEMBL
Match: A0A1S3CAD5 (60S ribosomal protein L10-like OS=Cucumis melo OX=3656 GN=LOC103498603 PE=3 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 5.0e-125
Identity = 219/220 (99.55%), Postives = 219/220 (99.55%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 26  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 85

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 86  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 145

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD
Sbjct: 146 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 205

Query: 181 YLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQAA 221
           YLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQ A
Sbjct: 206 YLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA 245

[Close]

BLAST of Bhi06G000099 vs. ExPASy TrEMBL
Match: A0A6J1CM71 (60S ribosomal protein L10-like OS=Momordica charantia OX=3673 GN=LOC111012895 PE=3 SV=1)

HSP 1 Score: 454.5 bits (1168), Expect = 2.5e-124
Identity = 218/220 (99.09%), Postives = 218/220 (99.09%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180

Query: 181 YLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQAA 221
           YL YKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQ A
Sbjct: 181 YLNYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA 220

[Close]

BLAST of Bhi06G000099 vs. ExPASy TrEMBL
Match: A0A6J1D5K0 (60S ribosomal protein L10-like OS=Momordica charantia OX=3673 GN=LOC111017508 PE=3 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 4.2e-124
Identity = 216/220 (98.18%), Postives = 219/220 (99.55%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180

Query: 181 YLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQAA 221
           YL+YK+ENKI+PDGVNAKLLGCHGPLANRQPGRAFLPQ A
Sbjct: 181 YLSYKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLPQTA 220

[Close]

BLAST of Bhi06G000099 vs. ExPASy TrEMBL
Match: A0A5A7TFE6 (60S ribosomal protein L10 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00450 PE=3 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 2.1e-123
Identity = 215/220 (97.73%), Postives = 218/220 (99.09%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180

Query: 181 YLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQAA 221
           YL +K+ENKI+PDGVNAKLLGCHGPLANRQPGRAFLPQ A
Sbjct: 181 YLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLPQTA 220

[Close]

BLAST of Bhi06G000099 vs. ExPASy TrEMBL
Match: A0A6J1FEG0 (60S ribosomal protein L10-like OS=Cucurbita moschata OX=3662 GN=LOC111444980 PE=3 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 2.1e-123
Identity = 215/220 (97.73%), Postives = 218/220 (99.09%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM+KFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMSKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           KPQGTCARVAIGQVLLSVRCKDSNSQH+QEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHSQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180

Query: 181 YLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQAA 221
           YLAYKA+NKILPDGVNAKLLGCHGPLANRQPGRAFLP  A
Sbjct: 181 YLAYKADNKILPDGVNAKLLGCHGPLANRQPGRAFLPDTA 220

The following BLAST results are available for this feature:

BLAST of Bhi06G000099 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G14320.1	6.7e-114	88.02	Ribosomal protein L16p/L10e family protein	[more]
AT1G26910.1	1.5e-113	87.27	Ribosomal protein L16p/L10e family protein	[more]
AT1G66580.1	3.1e-111	87.50	senescence associated gene 24	[more]
AT1G14320.2	3.0e-74	64.06	Ribosomal protein L16p/L10e family protein	[more]

BLAST of Bhi06G000099 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SPB3	8.8e-119	92.13	60S ribosomal protein L10 OS=Vitis riparia OX=96939 GN=RPL10 PE=2 SV=1	[more]
P93847	4.4e-118	93.98	60S ribosomal protein L10 OS=Solanum melongena OX=4111 GN=RPL10 PE=2 SV=1	[more]
Q9M5M7	2.2e-117	91.82	60S ribosomal protein L10 OS=Euphorbia esula OX=3993 GN=RPL10 PE=2 SV=1	[more]
Q93VT9	9.4e-113	88.02	60S ribosomal protein L10-1 OS=Arabidopsis thaliana OX=3702 GN=RPL10A PE=1 SV=1	[more]
Q08770	2.1e-112	87.27	60S ribosomal protein L10-2 OS=Arabidopsis thaliana OX=3702 GN=RPL10B PE=2 SV=2	[more]

BLAST of Bhi06G000099 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CAD5	5.0e-125	99.55	60S ribosomal protein L10-like OS=Cucumis melo OX=3656 GN=LOC103498603 PE=3 SV=1	[more]
A0A6J1CM71	2.5e-124	99.09	60S ribosomal protein L10-like OS=Momordica charantia OX=3673 GN=LOC111012895 PE...	[more]
A0A6J1D5K0	4.2e-124	98.18	60S ribosomal protein L10-like OS=Momordica charantia OX=3673 GN=LOC111017508 PE...	[more]
A0A5A7TFE6	2.1e-123	97.73	60S ribosomal protein L10 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A6J1FEG0	2.1e-123	97.73	60S ribosomal protein L10-like OS=Cucurbita moschata OX=3662 GN=LOC111444980 PE=...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036920	Ribosomal protein L10e/L16 superfamily	GENE3D	3.90.1170.10	Ribosomal protein L10e/L16	coord: 1..216 e-value: 2.6E-117 score: 392.0
IPR036920	Ribosomal protein L10e/L16 superfamily	SUPERFAMILY	54686	Ribosomal protein L16p/L10e	coord: 4..173
IPR001197	Ribosomal protein L10e	TIGRFAM	TIGR00279	TIGR00279	coord: 1..174 e-value: 4.2E-77 score: 255.6
IPR001197	Ribosomal protein L10e	PIRSF	PIRSF005590	RPL10a_RPL10e	coord: 1..182 e-value: 2.8E-95 score: 314.9
IPR001197	Ribosomal protein L10e	PANTHER	PTHR11726	60S RIBOSOMAL PROTEIN L10	coord: 1..217
IPR016180	Ribosomal protein L10e/L16	PFAM	PF00252	Ribosomal_L16	coord: 12..166 e-value: 1.0E-36 score: 125.8
IPR016180	Ribosomal protein L10e/L16	CDD	cd01433	Ribosomal_L16_L10e	coord: 41..166 e-value: 1.07177E-44 score: 143.016
None	No IPR available	PANTHER	PTHR11726:SF42	60S RIBOSOMAL PROTEIN L10-LIKE	coord: 1..217
IPR018255	Ribosomal protein L10e, conserved site	PROSITE	PS01257	RIBOSOMAL_L10E	coord: 108..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi06M000099	Bhi06M000099	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000027	ribosomal large subunit assembly
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome